HHsearch alignment for GI: 254780879 and conserved domain: PRK10783
>PRK10783 mltD membrane-bound lytic murein transglycosylase D; Provisional.
Probab=98.11 E-value=5.9e-05 Score=53.68 Aligned_cols=108 Identities=17% Similarity=0.166 Sum_probs=72.5
Q ss_pred CCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf 64013688417970899999749998999999998540156101699888999972788864058999716883489998
Q gi|254780879|r 273 EFADDLIPIQHNTTIFDAMVHAGYSNGDSAKIAKALKNEVRVDQLTKDEILRIGVVQKDDKFTIVRFSIYHKQKHLLTIA 352 (652)
Q Consensus 273 ~~~e~~v~VK~GDTL~~IL~r~Gvs~~ei~~i~~al~~~~~~~~Lr~Gq~L~I~~~~~~~~~~~~r~si~~~~~~~~~va 352 (652)
T Consensus 340 ~~~~~~y~Vr~GDtL~~IA~ky~vsv~~L~~~----N~L~-~~~L~~Gq~L~Ip~~~~~~~~~------~~~-------- 400 (449)
T PRK10783 340 PLNSRSYKVRSGDTLSGIASRLGVSTKDLQQW----NNLR-GSTLKVGQSLTIGAGSSAQRLA------NNS-------- 400 (449)
T ss_pred CCCCEEEEECCCCCHHHHHHHHCCCHHHHHHH----CCCC-CCCCCCCCEEEECCCCCCCCCC------CCC--------
T ss_conf 56760588589998999999979799999998----3999-4447899878737887555565------678--------
Q ss_pred ECCCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEE
Q ss_conf 4278843201333210000012211123345421102566688719998999999997301110121014454068875
Q gi|254780879|r 353 LNDNNEYVLGVEPVKMDINHQMDYMRTSEESPNIYDGIWRATSFNGMNSNLVKLIMRTLASSVNLQEHLKPTDFLETFF 431 (652)
Q Consensus 353 ~~d~g~fv~~~ep~~~~~~~~~~~~~~~~~~~~I~~SLy~aa~~~gip~~ii~~lv~i~a~dVDFqr~ir~GD~f~Vly 431 (652)
T Consensus 401 -----------~~~--------------~Y~Vk~GDTL~~IArry~Vsv~~L~~wN~~-------~~~L~pGQkL~I~v 447 (449)
T PRK10783 401 -----------DSI--------------TYRVRKGDSLSSIAKRHGVNIKDVMRWNSD-------TANLQPGDKLTLFV 447 (449)
T ss_pred -----------CCE--------------EEEECCCCCHHHHHHHHCCCHHHHHHHCCC-------CCCCCCCCEEEEEE
T ss_conf -----------965--------------899899997999999969899999986599-------77878999889984