HHsearch alignment of GI: 254780879 and MMDB domain: 1hcz_A_169-231
>1hcz_A (A:169-231) Cytochrome F; electron transport, photosynthesis, cytochrome B6F complex, chloroplast transmembrane; HET: HEM; 1.96A {Brassica rapa}
Probab=93.27 E-value=0.13 Score=29.83 Aligned_cols=57 Identities=19% Similarity=0.094 Sum_probs=42.7
Q ss_pred CCEEECCCCEEEEEEEECCCCCEEEEECC-CCEEEEEH-HHHHHHHCCCCCCEEECCCEE
Q ss_conf 72797159679996530897007999839-97488200-214454118899788349589
Q gi|254780879|r 524 TPIVAVGDGIVEKANWAGGYGKQTLIHHG-NGYVSSYN-HQDAIAKNIKAGTAVKQGQII 581 (652)
Q Consensus 524 TPI~Aag~G~V~~ag~~~GyGn~V~I~H~-~Gy~T~Ya-HlS~~a~gV~~G~~V~qGQvI 581 (652)
+.|+|--+|+|...+...-.++.|.|... +|-...|. ...+-. -|+.|++|+.||.|
T Consensus 1 nAiiae~~G~V~~i~~~~~g~~~i~I~~~~~g~~~~y~ip~g~~l-~V~~Gd~V~~G~~L 59 (63)
T 1hcz_A 1 TVYNATAGGIISKILRKEKGGYEITIVDASNERQVIDIIPRGLEL-LVSEGESIKLDQPL 59 (63)
T ss_dssp SCCBCSSCEEEEEEEECTTSCEEEEEEETTTTEEEEEEECTTCCB-CCCTTCEECTTCBS
T ss_pred CEEECCCCEEEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCEE-EECCCCEEECCCCC
T ss_conf 248256770788867668885699999569996788815999858-88289888469855