HHsearch alignment of GI: 254780879 and MMDB domain: 1q90_A_169-233
>1q90_A (A:169-233) Apocytochrome F; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii}
Probab=92.91 E-value=0.13 Score=29.79 Aligned_cols=58 Identities=21% Similarity=0.122 Sum_probs=42.7
Q ss_pred CCEEECCCCEEEEEEEEC--CCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCEEECCCEE
Q ss_conf 727971596799965308--9700799983997488200214454118899788349589
Q gi|254780879|r 524 TPIVAVGDGIVEKANWAG--GYGKQTLIHHGNGYVSSYNHQDAIAKNIKAGTAVKQGQII 581 (652)
Q Consensus 524 TPI~Aag~G~V~~ag~~~--GyGn~V~I~H~~Gy~T~YaHlS~~a~gV~~G~~V~qGQvI 581 (652)
|-|.|--+|+|....... -....|.|...+|-.-.|.=--.-.--|+.|++|+.||.|
T Consensus 1 sAiiaei~G~V~~i~~~~~~k~~~~I~I~~~dge~~~y~ip~~~~l~V~eGd~V~~Gq~L 60 (65)
T 1q90_A 1 TIYNASAAGKIVAITALSEKKGGFEVSIEKANGEVVVDKIPAGPDLIVKEGQTVQADQPL 60 (65)
T ss_dssp SCCBCSSSEEEEEEEECCTTTCCEEEEEECSSSCEEEEEECSSSCBCCCTTCEECTTCBS
T ss_pred CEEECCCCEEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCEEECCCCC
T ss_conf 448367874998820211678858999988999889997489997897689998389803