HHsearch results for GI: 254780879 and protein with PDBid: 1qwy_A
>1qwy_A Peptidoglycan hydrolase; LYTM lysostaphin metalloprotease asparagine switch; 1.30A {Staphylococcus aureus subsp} SCOP: b.84.3.2 PDB: 2b0p_A 2b13_A* 2b44_A
Probab=100.00 E-value=3.8e-35 Score=264.55 Aligned_cols=121 Identities=31% Similarity=0.528 Sum_probs=108.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCEEEEEEEE-CCCCCEEEEECCCC-EEEEEHHH
Q ss_conf 11233345410235676414340443464200302679672797159679996530-89700799983997-48820021
Q gi|254780879|r 485 LLRTPVPFGRMTSGFGMRYHPILGYSRMHTGVDWAAPRGTPIVAVGDGIVEKANWA-GGYGKQTLIHHGNG-YVSSYNHQ 562 (652)
Q Consensus 485 llr~Pv~~~risS~Fg~R~hPilg~~r~H~GVD~aAp~GTPI~Aag~G~V~~ag~~-~GyGn~V~I~H~~G-y~T~YaHl 562 (652)
-++||+.+ ++.++||..|. .++|.||||++|.||||+|+.+|+|+++||. .||||+|+|+|.++ +.|.|+||
T Consensus 163 ~~~wp~~g-~~~~~fG~~rg-----G~~H~GIDi~a~~GtpV~A~~dG~Vv~~g~~~~g~G~~ViI~h~~g~~~t~Y~HL 236 (291)
T 1qwy_A 163 DASWLTSR-KQLQPYGQYHG-----GGAHYGVDYAMPENSPVYSLTDGTVVQAGWSNYGGGNQVTIKEANSNNYQWYMHN 236 (291)
T ss_dssp SCHHHHTS-CEEECSEECTT-----SSEECSEEEECCTTCEEECSSSEEEEEEEEETTTTEEEEEEEETTSSEEEEEEEE
T ss_pred CCCCCCCC-CCCCCCCCCCC-----CCCEEEEEECCCCCCEEEECCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEEEC
T ss_conf 42056678-65588688897-----9965838858899996980128799998874678986999984899889997878
Q ss_pred HHHHHCCCCCCEEECCCEEEEECCCCCCCCCEEEEEEEECC----EECCCCEECCC
Q ss_conf 44541188997883495899841667888742688997867----88366200078
Q gi|254780879|r 563 DAIAKNIKAGTAVKQGQIIGWIGTTGLSTGPHLHYELIVNG----IKVDSTKVRIP 614 (652)
Q Consensus 563 S~~a~gV~~G~~V~qGQvIG~vGsTG~STGPHLHfEv~vnG----~~VdP~~~~lp 614 (652)
+++. |++||+|++||+||+||+||.||||||||||+.+| ++|||+.. |+
T Consensus 237 ~~i~--Vk~Gq~V~~Gq~IG~vG~TG~stgpHLHFEI~~~g~~~~~~VDP~~~-L~ 289 (291)
T 1qwy_A 237 NRLT--VSAGDKVKAGDQIAYSGSTGNSTAPHVHFQRMSGGIGNQYAVDPTSY-LQ 289 (291)
T ss_dssp SEEC--CCTTCEECTTCEEEECCCCSSCSSSEEEEEEEESEESGGGEECCHHH-HC
T ss_pred CCCC--CCCCCEECCCCEEEEECCCCCCCCCEEEEEEEECCCCCCEECCCHHH-HH
T ss_conf 8256--68889999789999868889989866899999899179877286997-01