HHsearch results for GI: 254780879 and protein with PDBid: 3csq_A
>3csq_A Morphogenesis protein 1; hydrolase, infection, late protein; 1.80A {Bacteriophage phi-29}
Probab=99.94 E-value=1e-27 Score=212.28 Aligned_cols=119 Identities=21% Similarity=0.223 Sum_probs=94.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC----CCCEEECCCCEEEEEEEECCC---CCEEEEECCCCEE-
Q ss_conf 11233345410235676414340443464200302679----672797159679996530897---0079998399748-
Q gi|254780879|r 485 LLRTPVPFGRMTSGFGMRYHPILGYSRMHTGVDWAAPR----GTPIVAVGDGIVEKANWAGGY---GKQTLIHHGNGYV- 556 (652)
Q Consensus 485 llr~Pv~~~risS~Fg~R~hPilg~~r~H~GVD~aAp~----GTPI~Aag~G~V~~ag~~~Gy---Gn~V~I~H~~Gy~- 556 (652)
++..|....+++++++.+ +.|.|+|++++. ||||+|+.||+|+++++.++| |++++|.|.+|..
T Consensus 168 ~~~~~~~~~~~~~~~~~~--------~~H~g~d~~~~~~~~~~~pv~A~~~G~V~~~~~~~~~~~~~~~~~i~~~~g~~~ 239 (334)
T 3csq_A 168 LAQFPMDIINISQGENGS--------FSHKGTLCIDFVGKTEKYPYYAPCDCTCVWRGDASAYLAWTSDKEVMCADGSVR 239 (334)
T ss_dssp BCBCSSSEEEEEECTTCT--------TTCTTSCCEEECCSSSSCEEECSSSEEEEEEETTTTEEEEEESSCEECTTSCEE
T ss_pred CCCCCCCCCEEECCCCCC--------CCCCCEEEEECCCCCCCCCEEECCCEEEEEEEECCCCCCCCCEEEEEECCCCEE
T ss_conf 688888886486079999--------887783614127998998589789989999972687553178699997899805
Q ss_pred -EEEHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCCCEEEEEEEECCEECCCCEE
Q ss_conf -8200214454118899788349589984166788874268899786788366200
Q gi|254780879|r 557 -SSYNHQDAIAKNIKAGTAVKQGQIIGWIGTTGLSTGPHLHYELIVNGIKVDSTKV 611 (652)
Q Consensus 557 -T~YaHlS~~a~gV~~G~~V~qGQvIG~vGsTG~STGPHLHfEv~vnG~~VdP~~~ 611 (652)
+.|.||+.....|++||+|++||+||+||+||+||||||||||+++..+..-++.
T Consensus 240 ~~~y~~~~~~~~~v~~G~~V~~G~~ig~~G~tG~stgpHLHfev~~g~~~~~~~~~ 295 (334)
T 3csq_A 240 YITWVNVHESPLPFDVGKKLKKGDLMGHTGIGGNVTGDHWHFNVIDGKEYQGWTKK 295 (334)
T ss_dssp CEEEEEECCSSCCCCTTCEECTTSEEEECBCCC----CBEEEEEEESSCCCCEEES
T ss_pred EEEEEEECCCCCCCCCCCEECCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCC
T ss_conf 99999734464568889897689779975789988998789999989844772337