HHSEARCH alignment of GI: 254780879 and SCOP domain: d1e2wa2

Alignment

Probab=90.55  E-value=0.14  Score=26.82  Aligned_cols=54  Identities=22%  Similarity=0.222  Sum_probs=39.2

Q ss_pred             EE-ECCCCEEEEEEE--ECCCCCEEEEECCCCEEEEEH--HHHHHHHCCCCCCEEECCCEE
Q ss_conf             79-715967999653--089700799983997488200--214454118899788349589
Q gi|254780879|r  526 IV-AVGDGIVEKANW--AGGYGKQTLIHHGNGYVSSYN--HQDAIAKNIKAGTAVKQGQII  581 (652)
Q Consensus       526 I~-Aag~G~V~~ag~--~~GyGn~V~I~H~~Gy~T~Ya--HlS~~a~gV~~G~~V~qGQvI  581 (652)
                      || |..+|+|.....  ...-++.|.|...+|-.-.|.  +-+++.  |+.|+.|+.||.|
T Consensus         2 ~~na~~aG~Vs~I~~~~~~kg~~~I~I~~~dGe~~~y~Ip~g~~l~--V~eGd~V~~G~~L   60 (64)
T d1e2wa2           2 IYNASAAGKIVAITALSEKKGGFEVSIEKANGEVVVDKIPAGPDLI--VKEGQTVQADQPL   60 (64)
T ss_dssp             CCBCSSCEEEEEEEESSSSSCCEEEEEECTTSCEEEEEECSSSCBC--CCTTCEECTTCBC
T ss_pred             EECCCCCEEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCCEEE--ECCCCEEECCCCC
T ss_conf             6647379799877861036895899999999999999747998688--8899999589735

SCOP domain information

class: All beta proteins
fold: Barrel-sandwich hybrid
superfamily: Rudiment single hybrid motif
family: Cytochrome f, small domain
domain: Cytochrome f, small domain
species: Chlamydomonas reinhardtii [TaxId: 3055]