HHsearch alignment of GI: 254780882 and MMDB domain: 1xo0_A_115-310
>1xo0_A (A:115-310) Recombinase CRE; CRE recombinase, holliday junction, recombination,complex (recombinase/DNA), hydrolase, ligase/DNA complex; 2.00A {Enterobacteria phage P1}
Probab=99.96 E-value=4.7e-30 Score=206.62 Aligned_cols=173 Identities=13% Similarity=0.015 Sum_probs=139.9
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC-------CCCCCCCC
Q ss_conf 11111015678776531013567757753201222100112332222211222223323220332-------37853100
Q gi|254780882|r 127 RALNEKQALTLVDNVLLHTSHETKWIDARNSAILYLLYGCGLRISEALSLTPQNIMDDQSTLRIQ-------GKGDKIRI 199 (328)
Q Consensus 127 ~~lt~~e~~~ll~~~~~~~~~~~~~~~~Rd~~i~~ll~~TGlR~~El~~L~~~did~~~~~i~v~-------gKg~K~R~ 199 (328)
++||.+|+.++++++.. .....+.|+++|+.|++.||||++|+++|+|+||+++.+.+.+. .++.+++.
T Consensus 2 r~lt~~e~~~l~~~~~~----~~~~~~~r~~~~~~l~~~tG~R~~Ei~~L~~~di~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (196)
T 1xo0_A 2 LAFERTDFDQVRSLMEN----SDRCQDIRNLAFLGIAYNTLLKIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVE 77 (196)
T ss_dssp CCCCHHHHHHHHHHHSS----CCCHHHHHHHHHHHHHHHHCCCHHHHHHCBGGGEEEEETTEEEEEECCCCSSSSCSCEE
T ss_pred CCCHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEE
T ss_conf 43017888899986403----02467899999997422356667665310122222221001100000001245666212
Q ss_pred CCCCCCCHHHHHHHHHHHCCCC---------------CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 0112210023432211100123---------------4466554321111221110001235678999768699988054
Q gi|254780882|r 200 VPLLPSVRKAILEYYDLCPFDL---------------NLNIQLPLFRGIRGKPLNPGVFQRYIRQLRRYLGLPLSTTAHT 264 (328)
Q Consensus 200 Vpi~~~~~~~l~~yl~~~~~~~---------------~~~~~~~lF~~~~g~~ls~~~i~~~~~~~~~~~gi~~~~spH~ 264 (328)
+|+.+.....+..+........ ......++|.+..|.+++...+...+++.+...|++.+++||+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 157 (196)
T 1xo0_A 78 KALSLGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAKDDSGQRYLAWSGHS 157 (196)
T ss_dssp EEECHHHHHHHHHHHHHHCGGGSTTSBSSCEECTTSCEECCSSCCCCHHHHHHHHHHHHHHHHCSCCCSCCSCSSCCTTH
T ss_pred EEHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 00478899999988887212211220122213432124543356431158888889999999999997288888878861
Q ss_pred CHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCH
Q ss_conf 179999999984899889999837888789799996198
Q gi|254780882|r 265 LRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVNS 303 (328)
Q Consensus 265 lRHtfAt~ll~~G~~~~~v~~~lGH~s~~tT~~Y~h~~~ 303 (328)
|||||||.|+++|+|+..||++|||+|++||++|+|+.+
T Consensus 158 lRht~at~l~~~g~~~~~i~~~lGH~~~~~t~~Y~~~~d 196 (196)
T 1xo0_A 158 ARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNYIRNLD 196 (196)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCSSSSSHHHHSTTSG
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCH
T ss_conf 389999999987899999998819998899999972536