HHsearch alignment of GI: 254780882 and MMDB domain: 1z19_A_1-93
>1z19_A (A:1-93) Integrase; protein-DNA complex, DNA binding protein/DNA complex; HET: PTR; 2.80A {Enterobacteria phage lambda} PDB: 1p7d_A*
Probab=99.34 E-value=5.5e-12 Score=93.77 Aligned_cols=92 Identities=16% Similarity=0.113 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999862548899999999999999999851214788789689899999999999986121013321123
Q gi|254780882|r 13 ELLKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAFISKRRTQKIGDRSLKRSL 92 (328)
Q Consensus 13 ~l~~~~e~~L~~l~~~r~~s~~T~~~Y~~~l~~f~~~~~~~~~~~~~~~~~~~i~~~~i~~~l~~l~~~~~s~~T~~~~l 92 (328)
++.+.+++|+++.+. +++|++|++.|...++.+..|++ ..++.+++..+++.|+..+.. +.|++|+++.+
T Consensus 2 T~~~~~~~~~~~~~~-~~~~~~T~~~y~~~~~~~~~~~g--------~~~i~~it~~~i~~~~~~~~~-~~s~~t~~~~~ 71 (93)
T 1z19_A 2 TLHSWLDRYEKILAS-RGIKQKTLINYXSKIKAIRRGLP--------DAPLEDITTKEIAAXLNGYID-EGKAASAKLIR 71 (93)
T ss_dssp BHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHSC--------SCBGGGCCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHC--------CCCHHHCCHHHHHHHHHHHHH-HCCHHHHHHHH
T ss_conf 699999999999987-59999999999999999999976--------999687999999999999987-20589999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 4442222333210123222222
Q gi|254780882|r 93 SGIKSFLKYLKKRKITTESNIL 114 (328)
Q Consensus 93 s~lr~f~~~~~~~~~i~~np~~ 114 (328)
++|++||+||+++|++..||+.
T Consensus 72 ~~l~~~f~~a~~~~~i~~NP~a 93 (93)
T 1z19_A 72 STLSDAFREAIAEGHITTNHVA 93 (93)
T ss_dssp HHHHHHHHHHHHTTSCSCCTTT
T ss_pred HHHHHHHCCCCHHHHHHHHHCC
T ss_conf 9888874244124454221011