HHsearch alignment of GI: 254780882 and MMDB domain: 2a3v_A_1-94
>2a3v_A (A:1-94) Site-specific recombinase INTI4; protein-DNA complex, recombination; HET: DNA; 2.80A {Vibrio cholerae o1 biovar eltor str}
Probab=99.56 E-value=9.9e-15 Score=110.92 Aligned_cols=91 Identities=13% Similarity=0.154 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q ss_conf 99999999999986254889999999999999999985121478878968989999999999998-61210133211234
Q gi|254780882|r 15 LKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAFISKRR-TQKIGDRSLKRSLS 93 (328)
Q Consensus 15 ~~~~e~~L~~l~~~r~~s~~T~~~Y~~~l~~f~~~~~~~~~~~~~~~~~~~i~~~~i~~~l~~l~-~~~~s~~T~~~~ls 93 (328)
.+.++.|+++++. +|+|++|+++|+.+++.|..|++. .++.+++..++..|+.++. ..++|++|++++++
T Consensus 3 ~~~i~~~l~~l~~-~~~s~~Ti~~y~~~l~~f~~~l~~--------~~~~~i~~~~i~~~~~~l~~~~~~s~~T~~~~l~ 73 (94)
T 2a3v_A 3 SQFLLSVREFMQT-RYYAKKTIEAYLHWITRYIHFHNK--------KHPSLMGDKEVEEFLTYLAVQGKVATKTQSLALN 73 (94)
T ss_dssp HHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHTTSSS--------CCGGGCCHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHCC--------CCHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 8999999999998-498999999999999999999710--------7944499999999999999838988326999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCC
Q ss_conf 442222333210123222222
Q gi|254780882|r 94 GIKSFLKYLKKRKITTESNIL 114 (328)
Q Consensus 94 ~lr~f~~~~~~~~~i~~np~~ 114 (328)
+|++||+||.++|+++.||+.
T Consensus 74 ~lr~f~~~~~~~~~i~~nP~~ 94 (94)
T 2a3v_A 74 SLSFLYKEILKTPLSLEIRFQ 94 (94)
T ss_dssp HHHHHHHHTSSCCCCTTCCCC
T ss_pred HHHHHHHHHHCCCCCCCCCCH
T ss_conf 998887510001245432200