HHsearch alignment of GI: 254780882 and MMDB domain: 2kkp_A_27-117
>2kkp_A (A:27-117) Phage integrase; SAM-like domain, alpha-helical bundle, structural genomics, PSI-2, protein structure initiative; NMR {Moorella thermoacetica atcc 39073}
Probab=99.27 E-value=1.4e-12 Score=97.57 Aligned_cols=89 Identities=9% Similarity=0.092 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999999999999851214788789689899999999999986121013321123444222233321012322222
Q gi|254780882|r 34 LTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAFISKRRTQKIGDRSLKRSLSGIKSFLKYLKKRKITTESNI 113 (328)
Q Consensus 34 ~T~~~Y~~~l~~f~~~~~~~~~~~~~~~~~~~i~~~~i~~~l~~l~~~~~s~~T~~~~ls~lr~f~~~~~~~~~i~~np~ 113 (328)
+|+++|+..++.|+.|+ ++..++.+++..++..|+.++.++|+|++|+++++++|+++|+||+++++++.||+
T Consensus 2 ~T~~~y~~~~~~~~~~~-------~g~~~i~~it~~~i~~~~~~l~~~g~s~~t~~~~~~~l~~~f~~a~~~~~i~~nP~ 74 (91)
T 2kkp_A 2 STWESYETVLRLHVIPT-------LGSIPLKKLQPADIQRLYASKLESGLSPTRVRYIHVVLHEAMSQARESGLLLQNPT 74 (91)
T ss_dssp CCCSHHHHHHHHHHCCC-------CCTSCTTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTTTSCSSCGG
T ss_pred CCHHHHHHHHHHHHHHH-------HCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 50989999999989999-------58873766707999999999997587768899999999999999998899441918
Q ss_pred CCCCCCCCCCCCCCCC
Q ss_conf 2222222221211111
Q gi|254780882|r 114 LNMRNLKKSNSLPRAL 129 (328)
Q Consensus 114 ~~i~~~k~~~~~p~~l 129 (328)
..++.|+..++.|+++
T Consensus 75 ~~i~~pk~~~~~~~~l 90 (91)
T 2kkp_A 75 EAAKPPRHPLEHHHHH 90 (91)
T ss_dssp GGSCCCCCCCCCCCCC
T ss_pred HHCCCCCCCCCCCCCC
T ss_conf 4297899986556678