HHsearch results for GI: 254780882 and protein with PDBid: 2khv_A
>2khv_A Phage integrase; solution structure, GFT, NESG, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Nitrosospira multiformis atcc 25196}
Probab=97.97 E-value=4.4e-06 Score=55.93 Aligned_cols=92 Identities=8% Similarity=0.062 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999862548899999999999999999851214788789689899999999999986121013321123
Q gi|254780882|r 13 ELLKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAFISKRRTQKIGDRSLKRSL 92 (328)
Q Consensus 13 ~l~~~~e~~L~~l~~~r~~s~~T~~~Y~~~l~~f~~~~~~~~~~~~~~~~~~~i~~~~i~~~l~~l~~~~~s~~T~~~~l 92 (328)
|+.++.++|++..+.+ -.|+.|...|++.++.++ .+.+|-.++++|+..+|..++..+.. + ++.|.++.+
T Consensus 2 TF~evA~~w~~~~~~~-w~~~~~~~~~~~~l~~~i-------~P~iG~~~I~~I~~~~i~~~l~~~~~-~-~~~tA~r~~ 71 (106)
T 2khv_A 2 TFSECAALYIKAHRSS-WKNTKHADQWTNTIKTYC-------GPVIGPLSVQDVDTKLIMKVLDPIWE-Q-KPETASRLR 71 (106)
T ss_dssp BHHHHHHHHHHTTGGG-GTTSTHHHHHHHHHHHHT-------HHHHTTSBSSSCCHHHHHHHHHHHHH-H-CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHH-------HHHCCCCCHHHHCHHHHHHHHHHHHH-H-HHHHHHHHH
T ss_conf 7999999999985013-799889999999999998-------88829992999688999999799996-5-199999999
Q ss_pred HHHHHHHHHHHHHCCCC-CCCCC
Q ss_conf 44422223332101232-22222
Q gi|254780882|r 93 SGIKSFLKYLKKRKITT-ESNIL 114 (328)
Q Consensus 93 s~lr~f~~~~~~~~~i~-~np~~ 114 (328)
+.++++|+||+..|++. .||+.
T Consensus 72 ~~~~~vf~~Ai~~g~~~~~NPA~ 94 (106)
T 2khv_A 72 GRIESVLDWATVRGYREGDNPAR 94 (106)
T ss_dssp HHHHHHHHHHHHHTSSCSCCTTS
T ss_pred HHHHHHHHHHHHCCCCCCCCHHH
T ss_conf 99999999999939867898276