HHsearch results for GI: 254780882 and protein with PDBid: 2kkv_A
>2kkv_A Integrase; protein structure, PSI, nesgc, structural genomics, protein structure initiative, northeast structural genomics consortium; NMR {Salmonella enterica subsp}
Probab=98.75 E-value=1.2e-08 Score=72.02 Aligned_cols=100 Identities=13% Similarity=0.167 Sum_probs=79.7
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 43149899999999999999862548899999999999999999851214788789689899999999999986121013
Q gi|254780882|r 7 PEIVSFELLKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAFISKRRTQKIGDR 86 (328)
Q Consensus 7 ~~~~~~~l~~~~e~~L~~l~~~r~~s~~T~~~Y~~~l~~f~~~~~~~~~~~~~~~~~~~i~~~~i~~~l~~l~~~~~s~~ 86 (328)
.+....|+.+.+++|++. .+.++++|...|...++ .++ .+.++..++.+|+..+|..++..+...| ++.
T Consensus 2 ~~~~~~TF~~va~~Wle~---~~~~~~~t~~~~~~~l~---~~i----~P~lG~~~i~~It~~di~~~l~~i~~~g-~~~ 70 (121)
T 2kkv_A 2 ENSGAYTFETIAREWHES---NKRWSEDHRSRVLRYLE---LYI----FPHIGSSDIRQLKTSHLLAPIKEVDTSG-KHD 70 (121)
T ss_dssp CSCCCCSHHHHHHHHHTT---CCSSCHHHHHHHHHHHH---HHH----SSSSTTSCTTCCCSGGGHHHHHHHHHTT-THH
T ss_pred CCCHHHHHHHHHHHHHHH---CCCCCHHHHHHHHHHHH---HHH----HHHHCCCCHHHHHHHHHHHHHHHHHHCC-CHH
T ss_conf 430633899999999998---79777618999999999---899----9993886599973999999999999919-979
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 3211234442222333210123222222222
Q gi|254780882|r 87 SLKRSLSGIKSFLKYLKKRKITTESNILNMR 117 (328)
Q Consensus 87 T~~~~ls~lr~f~~~~~~~~~i~~np~~~i~ 117 (328)
|.++.++.++++|+||+..|+++.||+.+++
T Consensus 71 ta~r~~~~l~~if~~Av~~g~i~~NP~~~i~ 101 (121)
T 2kkv_A 71 VAQRLQQRVTAIMRYAVQNDYIDSNPASDMA 101 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSCSCSCSSSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf 9999999999999999986880228577898