HHsearch results for GI: 254780882 and protein with PDBid: 2oxo_A
>2oxo_A Integrase; DNA-binding protein, four-helix bundle, DNA binding protein; 2.00A {Unidentified phage}
Probab=99.44 E-value=4e-13 Score=99.91 Aligned_cols=100 Identities=17% Similarity=0.134 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999862548899999999999999999851214788789689899999999999986121013321123
Q gi|254780882|r 13 ELLKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAFISKRRTQKIGDRSLKRSL 92 (328)
Q Consensus 13 ~l~~~~e~~L~~l~~~r~~s~~T~~~Y~~~l~~f~~~~~~~~~~~~~~~~~~~i~~~~i~~~l~~l~~~~~s~~T~~~~l 92 (328)
++.+.+++|+..++. +++|++|..+|...++.+..++ +..++.+++..+++.|+..+.+.+ +++|+++.+
T Consensus 2 Tl~~~~~~yl~~~~~-~~~~~~T~~~y~~~l~~~~~~~--------g~~~l~~it~~~i~~~~~~~~~~~-~~~t~~~~~ 71 (103)
T 2oxo_A 2 TLHSWLDRYEKILAS-RGIKQKTLINYMSKIKAIRRGL--------PDAPLEDITTKEIAAMLNGYIDEG-KAASAKLIR 71 (103)
T ss_dssp BHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHS--------CSCBGGGCCHHHHHHHHHHHHHTT-CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHHHHHHCC-CHHHHHHHH
T ss_conf 699999999999988-7999999999999999999998--------689677764698999999999847-715899999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 444222233321012322222222222222
Q gi|254780882|r 93 SGIKSFLKYLKKRKITTESNILNMRNLKKS 122 (328)
Q Consensus 93 s~lr~f~~~~~~~~~i~~np~~~i~~~k~~ 122 (328)
+.|+++|+||++.|+++.||+.+++.||.+
T Consensus 72 ~~l~~~f~~Av~~g~i~~NP~~~vk~pk~k 101 (103)
T 2oxo_A 72 STLSDAFREAIAEGHITTNHVAATRAAKSE 101 (103)
T ss_dssp HHHHHHHHHHHHTTSCSSCTTC--------
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHCCCCCCC
T ss_conf 999999999998889576954316667878