BLAST/PSIBLAST alignment of GI: 254780882 and GI: 241206644 at iteration 1
>gi|241206644|ref|YP_002977740.1| site-specific tyrosine recombinase XerC [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 311
>gi|240860534|gb|ACS58201.1| integrase family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 311
 Score =  298 bits (764), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 149/317 (47%), Positives = 210/317 (66%), Gaps = 10/317 (3%)

Query: 4   NNLPEIVSFELLKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTI 63
           N L  I    L+ ER  WL+NL  ER LS+ TL +YE DTRQFL FL  +    +T+  I
Sbjct: 2   NELLVIADPRLMTERAAWLENLASERRLSEHTLDAYERDTRQFLTFLTGHLAGPVTLGDI 61

Query: 64  RQLSYTEIRAFISKRRTQKIGDRSLKRSLSGIKSFLKYLKKRKITTESNILNMRNLKKSN 123
           R+L   + RAF++ RR Q  G RSL R+L+G++S L++L+K+ +   +    +R+ K+  
Sbjct: 62  RELRSADFRAFLAARRKQGSGARSLGRNLAGLRSLLRHLEKKGLVNAAGAAAVRSPKQPK 121

Query: 124 SLPRALNEKQALTLV-DNVLLHTSHETKWIDARNSAILYLLYGCGLRISEALSLTPQNIM 182
           SLP+ L++ QA+T+V D+  L   H+  WI AR++A++ LLYGCGLRISEAL LTP ++ 
Sbjct: 122 SLPKPLSDTQAITVVSDDAQL---HDEPWIAARDAAVMTLLYGCGLRISEALDLTPADLQ 178

Query: 183 DDQSTLRIQGKGDKIRIVPLLPSVRKAILEYYDLCPFDLNLNIQLPLFRGIRGKPLNPGV 242
              +TLRI GKG+K R+VPLL  +  A+ +Y  LCP+  +L    PLFRG RG  L   +
Sbjct: 179 KGATTLRITGKGNKTRLVPLLSVIFDAVEKYRTLCPY--HLEAGEPLFRGARGGKLQAAI 236

Query: 243 FQRYIRQLRRYLGLPLSTTAHTLRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVN 302
            QR ++++R   GLP + T H LRHSFATHLL+ GGDLR+IQ +LGH  LSTTQ+YT V+
Sbjct: 237 IQRTMQKMRSAFGLPETATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVD 296

Query: 303 SKNGGDWMMEIYDQTHP 319
           +      ++E+YD+ HP
Sbjct: 297 ASR----LLEVYDRAHP 309