BLAST/PSIBLAST alignment of GI: 254780882 and GI: 241206644 at iteration 1
>gi|241206644|ref|YP_002977740.1| site-specific tyrosine recombinase XerC [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 311
>gi|240860534|gb|ACS58201.1| integrase family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 311
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 149/317 (47%), Positives = 210/317 (66%), Gaps = 10/317 (3%)
Query: 4 NNLPEIVSFELLKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTI 63
N L I L+ ER WL+NL ER LS+ TL +YE DTRQFL FL + +T+ I
Sbjct: 2 NELLVIADPRLMTERAAWLENLASERRLSEHTLDAYERDTRQFLTFLTGHLAGPVTLGDI 61
Query: 64 RQLSYTEIRAFISKRRTQKIGDRSLKRSLSGIKSFLKYLKKRKITTESNILNMRNLKKSN 123
R+L + RAF++ RR Q G RSL R+L+G++S L++L+K+ + + +R+ K+
Sbjct: 62 RELRSADFRAFLAARRKQGSGARSLGRNLAGLRSLLRHLEKKGLVNAAGAAAVRSPKQPK 121
Query: 124 SLPRALNEKQALTLV-DNVLLHTSHETKWIDARNSAILYLLYGCGLRISEALSLTPQNIM 182
SLP+ L++ QA+T+V D+ L H+ WI AR++A++ LLYGCGLRISEAL LTP ++
Sbjct: 122 SLPKPLSDTQAITVVSDDAQL---HDEPWIAARDAAVMTLLYGCGLRISEALDLTPADLQ 178
Query: 183 DDQSTLRIQGKGDKIRIVPLLPSVRKAILEYYDLCPFDLNLNIQLPLFRGIRGKPLNPGV 242
+TLRI GKG+K R+VPLL + A+ +Y LCP+ +L PLFRG RG L +
Sbjct: 179 KGATTLRITGKGNKTRLVPLLSVIFDAVEKYRTLCPY--HLEAGEPLFRGARGGKLQAAI 236
Query: 243 FQRYIRQLRRYLGLPLSTTAHTLRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVN 302
QR ++++R GLP + T H LRHSFATHLL+ GGDLR+IQ +LGH LSTTQ+YT V+
Sbjct: 237 IQRTMQKMRSAFGLPETATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVD 296
Query: 303 SKNGGDWMMEIYDQTHP 319
+ ++E+YD+ HP
Sbjct: 297 ASR----LLEVYDRAHP 309