BLAST/PSIBLAST alignment of GI: 254780882 and GI: 86359460 at iteration 1
>gi|86359460|ref|YP_471352.1| site-specific tyrosine recombinase XerC [Rhizobium etli CFN 42] Length = 311
>gi|86283562|gb|ABC92625.1| tyrosine site-specific integrase/recombinase protein [Rhizobium etli CFN 42] Length = 311
Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 153/317 (48%), Positives = 211/317 (66%), Gaps = 10/317 (3%)
Query: 4 NNLPEIVSFELLKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTI 63
N L I L+ ER WL+NL ER LS+ TL +YE DTRQFL FL + T+ I
Sbjct: 2 NELLVIADPRLMAERAAWLENLARERRLSEHTLDAYERDTRQFLTFLTGHLAGPATLGDI 61
Query: 64 RQLSYTEIRAFISKRRTQKIGDRSLKRSLSGIKSFLKYLKKRKITTESNILNMRNLKKSN 123
R+L ++RAF++ RR Q G RSL R+L+G++S L++L+K+ + + +R+ K+
Sbjct: 62 RELRPADLRAFLAARRRQGSGARSLGRNLAGLRSLLRHLEKKGLVNAAGAGAIRSPKQPK 121
Query: 124 SLPRALNEKQALTLV-DNVLLHTSHETKWIDARNSAILYLLYGCGLRISEALSLTPQNIM 182
SLP+ L++ QA+T+V D L H+ WI AR++A++ LLYGCGLRISEAL+L P ++
Sbjct: 122 SLPKPLSDTQAITIVSDEAQL---HDEPWIAARDAAVMTLLYGCGLRISEALNLVPADLP 178
Query: 183 DDQSTLRIQGKGDKIRIVPLLPSVRKAILEYYDLCPFDLNLNIQLPLFRGIRGKPLNPGV 242
+TLRI GKG+K R+VPLLP V A+ +Y LCP+DL PLFRG RG L +
Sbjct: 179 KGATTLRITGKGNKTRLVPLLPVVFDAVEKYRALCPYDLESGE--PLFRGARGGKLQAAI 236
Query: 243 FQRYIRQLRRYLGLPLSTTAHTLRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVN 302
QR +++LR LGLP + T H LRHSFATHLL+ GGDLR+IQ +LGH LSTTQ+YT V+
Sbjct: 237 IQRAMQKLRGALGLPETATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVD 296
Query: 303 SKNGGDWMMEIYDQTHP 319
+ ++E+YD+ HP
Sbjct: 297 ASR----LLEVYDRAHP 309