BLAST/PSIBLAST alignment of GI: 254780882 and GI: 86359460 at iteration 1
>gi|86359460|ref|YP_471352.1| site-specific tyrosine recombinase XerC [Rhizobium etli CFN 42] Length = 311
>gi|86283562|gb|ABC92625.1| tyrosine site-specific integrase/recombinase protein [Rhizobium etli CFN 42] Length = 311
 Score =  301 bits (771), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 153/317 (48%), Positives = 211/317 (66%), Gaps = 10/317 (3%)

Query: 4   NNLPEIVSFELLKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTI 63
           N L  I    L+ ER  WL+NL  ER LS+ TL +YE DTRQFL FL  +     T+  I
Sbjct: 2   NELLVIADPRLMAERAAWLENLARERRLSEHTLDAYERDTRQFLTFLTGHLAGPATLGDI 61

Query: 64  RQLSYTEIRAFISKRRTQKIGDRSLKRSLSGIKSFLKYLKKRKITTESNILNMRNLKKSN 123
           R+L   ++RAF++ RR Q  G RSL R+L+G++S L++L+K+ +   +    +R+ K+  
Sbjct: 62  RELRPADLRAFLAARRRQGSGARSLGRNLAGLRSLLRHLEKKGLVNAAGAGAIRSPKQPK 121

Query: 124 SLPRALNEKQALTLV-DNVLLHTSHETKWIDARNSAILYLLYGCGLRISEALSLTPQNIM 182
           SLP+ L++ QA+T+V D   L   H+  WI AR++A++ LLYGCGLRISEAL+L P ++ 
Sbjct: 122 SLPKPLSDTQAITIVSDEAQL---HDEPWIAARDAAVMTLLYGCGLRISEALNLVPADLP 178

Query: 183 DDQSTLRIQGKGDKIRIVPLLPSVRKAILEYYDLCPFDLNLNIQLPLFRGIRGKPLNPGV 242
              +TLRI GKG+K R+VPLLP V  A+ +Y  LCP+DL      PLFRG RG  L   +
Sbjct: 179 KGATTLRITGKGNKTRLVPLLPVVFDAVEKYRALCPYDLESGE--PLFRGARGGKLQAAI 236

Query: 243 FQRYIRQLRRYLGLPLSTTAHTLRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVN 302
            QR +++LR  LGLP + T H LRHSFATHLL+ GGDLR+IQ +LGH  LSTTQ+YT V+
Sbjct: 237 IQRAMQKLRGALGLPETATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVD 296

Query: 303 SKNGGDWMMEIYDQTHP 319
           +      ++E+YD+ HP
Sbjct: 297 ASR----LLEVYDRAHP 309