RPSBLAST alignment for GI: 254780882 and conserved domain: PRK00236
>gnl|CDD|178942 PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed. Length = 297
Score = 315 bits (810), Expect = 1e-86
Identities = 125/308 (40%), Positives = 182/308 (59%), Gaps = 16/308 (5%)
Query: 13 ELLKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIR 72
+L + +L+ L +ERGLS TL++Y D R FL FL E+ I +++ L ++R
Sbjct: 5 DLPAALEAFLEYLRVERGLSPHTLRAYRRDLRAFLAFL-----EEHGISSLQDLDAADLR 59
Query: 73 AFISKRRTQKIGDRSLKRSLSGIKSFLKYLKKRKITTESNILNMRNLKKSNSLPRALNEK 132
+F+++RR Q + RSL R LS ++SF ++L +R + + +R K LP+ L+
Sbjct: 60 SFLARRRRQGLSARSLARRLSALRSFYRWLVRRGLLKANPAAGLRAPKIPKRLPKPLDVD 119
Query: 133 QALTLVDNVLLHTSHETKWIDARNSAILYLLYGCGLRISEALSLTPQNIMDDQSTLRIQG 192
QA L+D + E + R+ AIL LLYG GLR+SE + L ++ TLR+ G
Sbjct: 120 QAKRLLDAID-----EDDPLALRDRAILELLYGSGLRLSELVGLDIDDLDLASGTLRVLG 174
Query: 193 KGDKIRIVPLLPSVRKAILEYYDLCPFDLNLNIQLPLFRGIRGKPLNPGVFQRYIRQLRR 252
KG+K R VPL + R+A+ Y L P L + LF G RG L+P V QR +++L +
Sbjct: 175 KGNKERTVPLGRAAREALEAYLALRPLFLPDD--DALFLGARGGRLSPRVVQRRVKKLGK 232
Query: 253 YLGLPLSTTAHTLRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVNSKNGGDWMME 312
GLP T H LRHSFATHLL +GGDLR++Q +LGH LSTTQIYT+V+ ++ + E
Sbjct: 233 KAGLPSHITPHKLRHSFATHLLESGGDLRAVQELLGHASLSTTQIYTHVDFQH----LAE 288
Query: 313 IYDQTHPS 320
+YD HP
Sbjct: 289 VYDAAHPR 296