RPSBLAST alignment for GI: 254780882 and conserved domain: PRK05084
>gnl|CDD|179927 PRK05084, xerS, site-specific tyrosine recombinase XerS; Reviewed. Length = 357
Score = 69.2 bits (170), Expect = 1e-12
Identities = 76/331 (22%), Positives = 127/331 (38%), Gaps = 65/331 (19%)
Query: 31 LSKLTLQSYECDTRQFLIFL-----AFYTEEK-ITIQTIRQLSYTEIRAFISKRRTQK-- 82
S TL Y + R+F +L + ++ K I + T+ L+ ++ AFI R +
Sbjct: 33 YSPTTLYEYLTEYRRFFNWLISEGLSDASKIKDIPLSTLENLTKKDVEAFILYLRERPLL 92
Query: 83 --------IGDRSLKRSLSGIKSFLKYL------------------KKRKITTESNILNM 116
++ R+LS +KS KYL KK ++ + L
Sbjct: 93 NGHSTKKGNSQTTINRTLSALKSLFKYLTEEAENEDGEPYFYRNVMKKIELKKKKETLAA 152
Query: 117 RNLKKSNSLPRALNEKQA-LTLVDNVLLH-------TSHE-TKWIDARNSAILYLLYGCG 167
R L +E L +DN +S + K R+ AI+ L+ G G
Sbjct: 153 RAHNLKQKLFLG-DEDYEFLDFIDNEYEQKLSNRALSSFKKNK---ERDLAIIALILGSG 208
Query: 168 LRISEALSLTPQNIMDDQSTLRIQGKGDKIRIVPLLPSVRKAILEYYDL------CPFDL 221
LR+SE ++L ++ Q T+ + KG K V + P + EY +
Sbjct: 209 LRVSELVNLDLSDLNLKQMTIDVTRKGGKRDSVNIAPFALPYLEEYLKIRASRYKAE--- 265
Query: 222 NLNIQLPLF----RGIRGKPLNPGVFQRYIRQLRRYLGLPLSTTAHTLRHSFATHLLSNG 277
+ LF RG ++ ++ + + G+ L T H LRH+ AT L
Sbjct: 266 --KQEKALFLTKYRGK-PNRISARAIEKMVAKYSEAFGVRL--TPHKLRHTLATRLYDAT 320
Query: 278 GDLRSIQSILGHFRLSTTQIYTNVNSKNGGD 308
D + LGH TT +YT++ + +
Sbjct: 321 KDQVLVADQLGHTSTETTDLYTHIVNDEQKE 351