RPSBLAST alignment for GI: 254780882 and conserved domain: cd00799

>gnl|CDD|29500 cd00799, INT_Cre, Cre recombinase, C-terminal catalytic domain. Cre-like recombinases belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The bacteriophage P1 Cre recombinase maintains the circular phage replicon in a monomeric state by catalyzing a site-specific recombination between two loxP sites. The catalytic core domain of Cre recombinase is linked to a more divergent helical N-terminal domain, which interacts primarily with the DNA major groove proximal to the crossover region.. Length = 287
 Score = 58.4 bits (141), Expect = 2e-09
 Identities = 56/289 (19%), Positives = 104/289 (35%), Gaps = 44/289 (15%)

Query: 35  TLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTE--IRAFISKRRTQKIGDRSLKRSL 92
           T ++Y  D R+F    A+      T      L  +   +  +++      +   ++ R L
Sbjct: 3   TRKAYLSDWRRFA---AWCQAHGRT-----PLPASPETVTLYLTDL-ADSLAPSTISRRL 53

Query: 93  SGIKSFLKYLKKRKITTESNILN--MRNLKKSNSLPRALNEKQALTL----VDNVLLHTS 146
           S +    +         +S ++   +R +++  + P+    +QAL +    +D +     
Sbjct: 54  SALSQLHRR-SGLPSPADSPLVRLVLRGIRREEARPK----RQALAILPEDLDKLRSLLD 108

Query: 147 HETKWIDARNSAILYLLYGCGLRISEALSLTPQNI-MDDQSTLRI---QGKGDK------ 196
                 D R+ A+L L +   LR SE + L  +++   D   L +   + K D+      
Sbjct: 109 ESDTLRDLRDLALLLLGFAGLLRRSELVRLRWEDLTFTDGGGLLVTLRRSKTDQSGLGVL 168

Query: 197 IRIVPLLPSVRKAILEYYDLCPFDLNLNIQLPLFRGIRGKP------LNPGVFQRYIRQL 250
             I PL     +A+  + +            PLFR I          L+     R +++L
Sbjct: 169 KLIPPLTTCPVRALERWLEAARIPKG-----PLFRRIDRWGVLGPGALSDNSLNRILKRL 223

Query: 251 RRYLGLPLST-TAHTLRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIY 298
               GL   + + H+LR  FAT     G  L  I              Y
Sbjct: 224 AEAAGLRSGSWSGHSLRRGFATEAARAGYSLLEIMRQGRWRSPKMVSRY 272