RPSBLAST alignment for GI: 254780882 and conserved domain: cd01183
>gnl|CDD|29504 cd01183, INT_SG1_C, INT_SG1, DNA breaking-rejoining enzymes, integrase/recombinases subgroup 1, C-terminal catalytic domain. The CD contains mainly predicted integrase/recombinase and site-specific XerD recombinases. The members of this CD are found predominantly in proteobacteria. These proteins have not been biochemically characerised as yet.. Length = 196
Score = 72.7 bits (178), Expect = 1e-13
Identities = 47/177 (26%), Positives = 68/177 (38%), Gaps = 26/177 (14%)
Query: 148 ETKWIDARNSAILYLLYGCGLRISEALSLT----PQNIMDDQSTLRI-QGKGDKIRIVPL 202
+ AR +L LLY GLRISE + T + L + GKG K R VP+
Sbjct: 20 QDPEHAARLLFLLALLYSTGLRISELAAATGPDLEAFVQGGGWWLYVPVGKGGKERRVPV 79
Query: 203 LPSVRKAILEY---YDLCPFDLNLNIQLPLFRGIRGKPLNPGVFQR-YIRQLRRYLGLPL 258
+ A+ Y L P + +PL + G+ R ++R G
Sbjct: 80 SDELLAALARYRQARGLPP-EPAAGEAVPLLGRHKSAGGGGGLSSAQLYRIVKRVFGAAA 138
Query: 259 ----------------STTAHTLRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIYT 299
+ + H LRH+ A+H L+ G L +Q LGH + TT Y
Sbjct: 139 DRLQADGFEEDAAQLRAASTHWLRHTHASHDLAAGVPLEHVQDNLGHASIDTTSRYL 195