RPSBLAST alignment for GI: 254780882 and conserved domain: cd01186

>gnl|CDD|29507 cd01186, INT_SG3_C, INT_SG3, DNA breaking-rejoining enzymes, integrase/recombinases subgroup 3, catalytic domain. The CD contains various predicted bacterial and phage integrase/recombinase sequences for which not much experimental characterization is available.. Length = 180

 Score = 52.1 bits (125), Expect = 2e-07
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 13/170 (7%)

Query: 150 KWIDARNSAILYLLYGCG----LRISEALSLTPQNIMDDQSTLRIQGKGDKIRIVPLLPS 205
           K     +S   YLL+  G    LRIS+ L+L  +++  D+     + K  K + + L P 
Sbjct: 16  KDYLKNHSERNYLLFLIGINTGLRISDILALKVKDVRGDERISIKEKKTGKRKRIYLNPI 75

Query: 206 VRKAILEYYDLCPFDLNLNIQLPLFRGIRGKPLNPGVFQRY--IRQLRRYLGLPLSTTAH 263
           +++ +L Y         L     LF+  +G        Q Y  +++    +G+    T H
Sbjct: 76  LKEELLYYIKD------LEENEYLFQSRKGGNRPITRQQAYRILKKAAEQVGIDNIGT-H 128

Query: 264 TLRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVNSKNGGDWMMEI 313
           TLR +F  H      D+  +  I  H   + T  Y  +N       +   
Sbjct: 129 TLRKTFGYHYYKQTKDIALLMEIFNHSSPAITLRYIGINQDEIDKQLDNF 178