RPSBLAST alignment for GI: 254780882 and conserved domain: cd01198
>gnl|CDD|29519 cd01198, INT_ASSRA_C, Archaeal site-specific recombinase A (ASSRA), DNA breaking-rejoining enzymes, integrase/recombinases, C-terminal catalytic domain. Members of this CD are archael in origin. No biochemical characterization is available for the proteins of this subgroup at this point.. Length = 186
Score = 40.3 bits (94), Expect = 8e-04
Identities = 38/175 (21%), Positives = 65/175 (37%), Gaps = 19/175 (10%)
Query: 158 AILYLLYGCGLRISEALSLTPQNIMDDQSTLRIQGKGDKIR---IVPLLPSVRKAILEYY 214
A++ L G+R E ++L +++ D+ TL ++ +K + P L + +
Sbjct: 21 AVIVGLAKTGIRRGELINLDRRDVNLDKPTLYLKPASNKRSNRTLFPDLET--ELFRWLA 78
Query: 215 DLCPFDLNLNIQLPLFRGIRGKPLNPGVFQRYIRQLRRYLGLP-------LSTTAHTLRH 267
+ LF G + + + + R G + T H RH
Sbjct: 79 IRPRTTSPAD---ALFIGTQDGWGCRRLVYEMVTGMARRHGEHRPWGDLEENFTPHCFRH 135
Query: 268 SFATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVNSKNGGDWMMEIYDQTHPSIT 322
F T L GGD +Q + G R YT+ GD + E Y + PS+
Sbjct: 136 FFTTWLRRRGGDRGVVQELRGDSRDEAIDTYTH----IWGDELREAYLKHIPSLG 186