RPSBLAST alignment of GI: 254780882 and SCOP domain: d1aiha_

Alignment

 Score = 46.3 bits (108), Expect = 4e-06
 Identities = 37/178 (20%), Positives = 60/178 (33%), Gaps = 28/178 (15%)

Query: 142 LLHTSHETKWIDARNSAILYLLYGCGLRISEALSLTPQNIMDDQSTLRIQGKGDKIRIVP 201
           LL     ++  D     I+ +    G R SE      Q+ +          K  K R VP
Sbjct: 15  LLAECDNSRNPDLG--LIVRICLATGARWSE-AETLTQSQVMPYKITFTNTKSKKNRTVP 71

Query: 202 LLPSVRKAILEYYDLCPFDLNLNIQLPLFRGIRGKPLNPGVFQRYIRQLRRYLGLPLSTT 261
           +   +   + +       D                             LR  + LP    
Sbjct: 72  ISDELFDMLPKKRGRLFNDAY--------------------ESFENAVLRAEIELPKGQL 111

Query: 262 AHTLRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVNSKNGGDWMMEIYDQTHP 319
            H LRH+FA+H + NGG++  ++ ILGH  +  T  Y +          +E   + +P
Sbjct: 112 THVLRHTFASHFMMNGGNILVLKEILGHSTIEMTMRYAHFAPS-----HLESAVKFNP 164

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNA breaking-rejoining enzymes
superfamily: DNA breaking-rejoining enzymes
family: Lambda integrase-like, catalytic core
domain: Integrase
species: Bacteriophage HP1 [TaxId: 10690]