RPSBLAST alignment of GI: 254780882 and SCOP domain: d1f44a1

Alignment

>d1f44a1 a.60.9.1 (A:20-129) Cre recombinase {Bacteriophage P1 [TaxId: 10678]} Length = 110

 Score = 39.1 bits (90), Expect = 5e-04
 Identities = 12/107 (11%), Positives = 41/107 (38%), Gaps = 7/107 (6%)

Query: 18  RQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAFISK 77
           R+N +      +  S+ T +      R +  +      +    +        ++R ++  
Sbjct: 5   RKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAE------PEDVRDYLLY 58

Query: 78  RRTQKIGDRSLKRSLSGIKSFLKYLKKRKITTESNI-LNMRNLKKSN 123
            + + +  +++++ L  +    +     + +  + + L MR ++K N
Sbjct: 59  LQARGLAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVMRRIRKEN 105

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: lambda integrase-like, N-terminal domain
family: lambda integrase-like, N-terminal domain
domain: Cre recombinase
species: Bacteriophage P1 [TaxId: 10678]