HHsearch results for GI: 254780885 and protein with PDBid: 2rde_A
>2rde_A Uncharacterized protein VCA0042; C-DI-GMP, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.92A {Vibrio cholerae O395} SCOP: b.45.2.1 b.45.2.2 PDB: 1yln_A* 3kyg_A*
Probab=98.05 E-value=5.4e-05 Score=49.54 Aligned_cols=87 Identities=16% Similarity=0.251 Sum_probs=59.7
Q ss_pred CCCCHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCEEEECCCC---CCCCCEEEE-------C-----CEEEE
Q ss_conf 67502102567477776513689957998898999987424204551577---899855897-------3-----46699
Q gi|254780885|r 112 LHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQ---IEMFSKVLF-------N-----DILGR 176 (207)
Q Consensus 112 l~l~e~R~h~R~vPr~~~~~~~l~l~DG~~~~criiDiS~SGAAi~~~~r---p~iGs~V~v-------G-----~~~gr 176 (207)
.-.-..|.|.|+.-.-| +++.. ++..+.|.+.|+|.+|+++..+.. +.+|..+.+ | .+.|+
T Consensus 129 ie~~qlR~~~Rv~v~lp---a~l~~-~~~~~~g~i~DIS~gG~~~~~~~~~~~~~~g~~v~l~~~l~~~~~~~~~~l~g~ 204 (251)
T 2rde_A 129 MQVSQLRKEPRFELNLA---GKVLF-DEHRGDCELRDLSRSGCRFITPPLGKTYQVGDLVALEIFSDLRGTKTFPPLTGK 204 (251)
T ss_dssp EEEEECCSSCBEEEEEE---EEEEE-TTEEEEEEEEEECSSEEEEEECTTSCCCCTTCEEEEEEBSSTTSSCBCSCEEEE
T ss_pred EEEEEEECCEEEEEEEE---EEEEE-CCEEEEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEE
T ss_conf 69995257788995238---99998-998989999986457858996787765579988999999726997267999999
Q ss_pred EEEEECCE----EEEEECCCCCCC--HHHHHH
Q ss_conf 99993890----899971677842--367787
Q gi|254780885|r 177 VVRIFPGG----IAIEFSSVQESN--IAFKSL 202 (207)
Q Consensus 177 VVRh~~~G----faVeF~~~q~~~--~~~~~~ 202 (207)
|++....+ +|++|.++.+.+ .|..++
T Consensus 205 Vr~v~~~~~~~~~Gv~F~~~~~~~~~~Ll~~L 236 (251)
T 2rde_A 205 ICNLQRSLHHARYGLEFNEEGRNNAKNLLAQL 236 (251)
T ss_dssp EEEEEECSSCEEEEEEECHHHHHHHHHHHHHC
T ss_pred EEEEEECCCCEEEEEEECCCCHHHHHHHHHHE
T ss_conf 99989648938999998889989999999760