HHsearch results for GI: 254780885 and protein with PDBid: 3kyf_A
>3kyf_A PP4397, putative uncharacterized protein; C-DI-GMP, PILZ domain, VCA0042, unknown function; HET: 5GP; 2.10A {Pseudomonas putida} PDB: 2gjg_A
Probab=96.62 E-value=0.018 Score=34.08 Aligned_cols=147 Identities=13% Similarity=0.125 Sum_probs=81.9
Q ss_pred ECCCC-CEEEEEEEECCCCEEEEECCCCC-------CCCCEEEEEECCCC---CEEEEE-EEE--CCCCCEEEEEECCHH
Q ss_conf 46898-30269998756854999427887-------67974999995544---376999-993--089838999976987
Q gi|254780885|r 29 LFDGT-EYNCIVREISPGGLCIVCDVPMF-------LVGERSIVFVEKVG---RIEGKV-VNF--DSNRGYAVRIVTSEN 94 (207)
Q Consensus 29 l~d~~-E~~C~t~diSpgg~~l~~~~~~~-------~~Gervv~Yld~iG---rlEG~V-~r~--~~~~GFav~l~~t~~ 94 (207)
..++. .|.+...++.+..-.+.-+...| ..|+.+.++..+=| .|...+ .+. .++ .=++.+...+
T Consensus 31 ~~~~~~~~~t~il~vd~~~~~~~lD~~~~~~~n~~l~~g~~~~~~~~~~gv~i~F~~~~~~~~~e~~~-~~~~~~~~P~- 108 (231)
T 3kyf_A 31 FHDRSHRFQSYVVHVDRESNTLALDEMIPRDGEKFIENGEHFRVEGFHDGVRIAWECDHALKISEVDG-HRCYSGPLPQ- 108 (231)
T ss_dssp ETTCCCEEEECEEEEETTTTEEEEECCBSGGGHHHHHTTCCEEEEEEETTEEEEEEECSCCEEEEETT-EEEEEECCCS-
T ss_pred ECCCCCEEEEEEEEEECCCCEEEEECCCCHHHHHHHCCCCEEEEEEEECCEEEEEEECCEEEEEEECC-CEEEEECCCH-
T ss_conf 98999689999999968899899955896577587457966999999799899999773389987789-4599944966-
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCEEEEE-----ECCCCEEEEEEEEEECCCEEEECCCCC----CCC
Q ss_conf 89999999998764243675021025674777765136899-----579988989999874242045515778----998
Q gi|254780885|r 95 ERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLV-----LNDNTKHSCKVIDISESGVSVSVDLQI----EMF 165 (207)
Q Consensus 95 kR~kLA~qLtWlanr~~l~l~e~R~h~R~vPr~~~~~~~l~-----l~DG~~~~criiDiS~SGAAi~~~~rp----~iG 165 (207)
.+-.-..|.+-|+....... .... .+|+..+.+++.|+|..|+++.++... .+|
T Consensus 109 ----------------~l~~~QRR~~~Rv~~~~~~~-~~~~~~~~~~~~~~~~~~~l~DIS~GG~~l~~~~~~~~~~~~g 171 (231)
T 3kyf_A 109 ----------------EVTYHQRRNAFRAALKLSQL-VDIILDGAHLKGNGAMRGKLLDISATGCKLRFEGNVEDRLQLG 171 (231)
T ss_dssp ----------------CEEEECCCSSCCEECCGGGC-CEEEECCTTCCSSSCEEEEEEEECSSEEEEEEEBCCGGGCCTT
T ss_pred ----------------HHEEEEEHHEEEECCCCCCE-EEEEECCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCC
T ss_conf ----------------82883111007853788847-9999626777888546789996577755899657655567663
Q ss_pred CEE---EE----C--CEEEEEEEEECC----E--EEEEECCCCC
Q ss_conf 558---97----3--466999999389----0--8999716778
Q gi|254780885|r 166 SKV---LF----N--DILGRVVRIFPG----G--IAIEFSSVQE 194 (207)
Q Consensus 166 s~V---~v----G--~~~grVVRh~~~----G--faVeF~~~q~ 194 (207)
..+ .+ | .+.++|++.... + ++++|.++-.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~vr~~~~~~~~~~~~~G~~F~~l~~ 215 (231)
T 3kyf_A 172 QVYERFKAGNPLGLVDTMVELRHLHYEERINTTFAGVRFHNLSG 215 (231)
T ss_dssp CEEEEEEETTTTCEEEEEEEEEEEEEEGGGTEEEEEEEEESCCH
T ss_pred EEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEEEEEEECCCCH
T ss_conf 39998786278846877899999985488876999999888999