BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780885|ref|YP_003065298.1| hypothetical protein
CLIBASIA_03910 [Candidatus Liberibacter asiaticus str. psy62]
(207 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|86749268|ref|YP_485764.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris HaA2]
gi|86572296|gb|ABD06853.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 203
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 67/195 (34%), Positives = 114/195 (58%), Gaps = 4/195 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
++R FQRVK+ L GR++L D E+ C V +SPGGL ++ + VG+R I +++ +G
Sbjct: 13 AERRRFQRVKIHLLGRYMLPDRREFPCQVINMSPGGLAMLAPG-IGNVGDRVIAYLDHIG 71
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
R+EGK+ N G+A+ + + +R KLA +L WLAN+D L+L + R + R + R+
Sbjct: 72 RVEGKITRIIDN-GFAMTVGATPRKRDKLAAQLTWLANRDILNLPEDRRHDRIVPRNPI- 129
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
+ L L D ++ +C++ID+S SG +++ + + ++VL + RVVR G A+EF
Sbjct: 130 -SVLTLEDGSRMTCRIIDMSRSGAAIAAEQRPPTDTQVLLGRVAARVVRHLDDGFALEFV 188
Query: 191 SVQESNIAFKSLINH 205
Q + S+
Sbjct: 189 HEQNEDTLEDSVTTQ 203
>gi|254780885|ref|YP_003065298.1| hypothetical protein CLIBASIA_03910 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040562|gb|ACT57358.1| hypothetical protein CLIBASIA_03910 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 207
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MYRGIHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGE 60
MYRGIHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGE
Sbjct: 1 MYRGIHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGE 60
Query: 61 RSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAY 120
RSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAY
Sbjct: 61 RSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAY 120
Query: 121 GRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRI 180
GRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRI
Sbjct: 121 GRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRI 180
Query: 181 FPGGIAIEFSSVQESNIAFKSLINHCY 207
FPGGIAIEFSSVQESNIAFKSLINHCY
Sbjct: 181 FPGGIAIEFSSVQESNIAFKSLINHCY 207
>gi|27380679|ref|NP_772208.1| hypothetical protein blr5568 [Bradyrhizobium japonicum USDA 110]
gi|27353844|dbj|BAC50833.1| blr5568 [Bradyrhizobium japonicum USDA 110]
Length = 205
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 115/194 (59%), Gaps = 4/194 (2%)
Query: 10 FIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKV 69
++R FQRVKV L GR++L D E+ C V +SPGGL ++ + VG+R + +++ +
Sbjct: 14 AEERRRFQRVKVHLLGRYMLPDRREFPCQVINMSPGGLALLAPG-IGNVGDRVVAYLDHI 72
Query: 70 GRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDRE 129
GR+EGK+ N G+A+ I + +R KLA +L WLAN+D L+L + R + R + R+
Sbjct: 73 GRVEGKITRIIDN-GFAMTIGATPRKRDKLAAQLTWLANRDILNLPEDRRHDRIVPRNPI 131
Query: 130 VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEF 189
A L L D TK +C++ID+S SG +++ + + + S VL + GRVVR G A+EF
Sbjct: 132 --AVLTLEDGTKMTCRIIDLSLSGAAIAAENRPPLKSIVLLGRVQGRVVRNLEDGFALEF 189
Query: 190 SSVQESNIAFKSLI 203
Q +S+
Sbjct: 190 MHEQPIETLEESVT 203
Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 104 IWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIE 163
+ LANK L + R R + + +L D + C+VI++S G+++
Sbjct: 3 MALANKKFLPAAEERR--RFQRVKVHLLGRYMLPDRREFPCQVINMSPGGLALLAPGIGN 60
Query: 164 MFSKVL-----FNDILGRVVRIFPGGIAIEF-SSVQESNIAFKSLI 203
+ +V+ + G++ RI G A+ ++ ++ + L
Sbjct: 61 VGDRVVAYLDHIGRVEGKITRIIDNGFAMTIGATPRKRDKLAAQLT 106
>gi|148256529|ref|YP_001241114.1| hypothetical protein BBta_5217 [Bradyrhizobium sp. BTAi1]
gi|146408702|gb|ABQ37208.1| hypothetical protein BBta_5217 [Bradyrhizobium sp. BTAi1]
Length = 202
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 117/194 (60%), Gaps = 4/194 (2%)
Query: 10 FIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKV 69
++R FQRVKV L GR++L D E+ C V +SPGGL ++ + VG+R I +++ +
Sbjct: 11 AEERRRFQRVKVHLLGRYMLPDRREFPCQVINMSPGGLALLAPG-IGNVGDRVIAYLDHI 69
Query: 70 GRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDRE 129
GR+EGK+ N G+A+ I + +R KLA +L WLAN+D L+L + R + R I R+
Sbjct: 70 GRVEGKITRIIDN-GFAMTIGATARKRDKLAAQLTWLANRDILNLPEDRRHDRIIPRNPI 128
Query: 130 VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEF 189
A L L D TK +C++ID+S SG +++ + + M S+V+ + RVVR GG AIEF
Sbjct: 129 --AVLTLEDGTKMTCRIIDMSLSGAAIAAETRPPMKSQVMLGRVQARVVRNLEGGFAIEF 186
Query: 190 SSVQESNIAFKSLI 203
Q + +S+
Sbjct: 187 VHPQLAETLEESVT 200
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 112 LHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVL-- 169
++ R + R + + +L D + C+VI++S G+++ + +V+
Sbjct: 9 PAAEERRRFQRV---KVHLLGRYMLPDRREFPCQVINMSPGGLALLAPGIGNVGDRVIAY 65
Query: 170 ---FNDILGRVVRIFPGGIAI 187
+ G++ RI G A+
Sbjct: 66 LDHIGRVEGKITRIIDNGFAM 86
>gi|254470288|ref|ZP_05083692.1| type IV pilus assembly PilZ [Pseudovibrio sp. JE062]
gi|211960599|gb|EEA95795.1| type IV pilus assembly PilZ [Pseudovibrio sp. JE062]
Length = 211
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 66/193 (34%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
D+R F RV++++ GRF+L + EY C V +SPGG + V M +GER + +++ +GR
Sbjct: 19 DRRRFSRVEINVLGRFMLENRREYPCQVVNMSPGGAAFISPV-MGEIGERVVAYLDHIGR 77
Query: 72 IEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVD 131
+EGK+V G+A+ + S +R KLA L WLANKD+L+L + R + R + ++
Sbjct: 78 VEGKIVREIDG-GFAMTVNASARKRDKLASVLTWLANKDELNLPEDRRFDRFVPKNPMT- 135
Query: 132 AQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSS 191
+++L D +++C+++D+S SG ++ D++ + + + + R+VR F GIA+EF++
Sbjct: 136 -KIILPDGREYACRIVDVSLSGAALKTDVRPALGTPITLGKMRARIVRHFEEGIAVEFAT 194
Query: 192 VQESNIAFKSLIN 204
VQ + + N
Sbjct: 195 VQNKELLEHHISN 207
>gi|146339954|ref|YP_001205002.1| hypothetical protein BRADO2958 [Bradyrhizobium sp. ORS278]
gi|146192760|emb|CAL76765.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 202
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 117/194 (60%), Gaps = 4/194 (2%)
Query: 10 FIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKV 69
++R FQRVKV L GR++L D EY C V +SPGGL ++ + VG+R I +++ +
Sbjct: 11 AEERRRFQRVKVHLLGRYMLPDRREYPCQVINMSPGGLALLAPG-IGNVGDRVIAYLDHI 69
Query: 70 GRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDRE 129
GR+EGK+ N G+A+ I + +R KLA +L WLAN+D L+L + R + R I R+
Sbjct: 70 GRVEGKITRIIDN-GFAMTIGATARKRDKLAAQLTWLANRDILNLPEDRRHDRIIPRNPI 128
Query: 130 VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEF 189
A L L D TK +C++ID+S SG +++ + + M S+V+ + RV+R GG AIEF
Sbjct: 129 --AVLTLEDGTKMTCRIIDMSLSGAAIAAETKPAMKSQVMLGRVQARVIRNLEGGFAIEF 186
Query: 190 SSVQESNIAFKSLI 203
Q + +S+
Sbjct: 187 MHPQLAETLEESVT 200
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 109 KDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKV 168
K L + R R + + +L D ++ C+VI++S G+++ + +V
Sbjct: 5 KQSLPAAEERR--RFQRVKVHLLGRYMLPDRREYPCQVINMSPGGLALLAPGIGNVGDRV 62
Query: 169 L-----FNDILGRVVRIFPGGIAI 187
+ + G++ RI G A+
Sbjct: 63 IAYLDHIGRVEGKITRIIDNGFAM 86
>gi|85715638|ref|ZP_01046618.1| hypothetical protein NB311A_18356 [Nitrobacter sp. Nb-311A]
gi|85697577|gb|EAQ35454.1| hypothetical protein NB311A_18356 [Nitrobacter sp. Nb-311A]
Length = 202
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 70/193 (36%), Positives = 115/193 (59%), Gaps = 4/193 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
++R FQRVK+ L GR++L D E+ C V +SPGGL ++ + VG+R + +++ +G
Sbjct: 12 AERRRFQRVKIHLLGRYMLPDRREFPCQVINMSPGGLAMLAPG-IGNVGDRVVAYLDHIG 70
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
R+EGKV G+A+ I + +R KLA +L WLAN+D L+L + R + R + R+
Sbjct: 71 RVEGKVTRIID-SGFAMNISATPRKRDKLASQLTWLANRDILNLPEDRRHDRIVPRNP-- 127
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
A L L D T+ +C+++D+S+SG +VS + + + S+V +L RVVR G A+EF
Sbjct: 128 VANLTLEDGTQLTCRILDLSKSGAAVSAEKRPPLRSRVALGKVLARVVRYLEEGFALEFI 187
Query: 191 SVQESNIAFKSLI 203
Q + ++
Sbjct: 188 HEQHPDTLEDNVT 200
>gi|91977744|ref|YP_570403.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris BisB5]
gi|91684200|gb|ABE40502.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris BisB5]
Length = 203
Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 113/193 (58%), Gaps = 4/193 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
++R FQRVK+ L GR++L D E+ C V +SPGGL ++ + VG+R I +++ +G
Sbjct: 13 AERRRFQRVKLHLLGRYMLPDRREFPCQVINMSPGGLAMLAPG-IGNVGDRVIAYLDHIG 71
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
R+EGK+ N G+A+ + + +R KLA +L WLAN+D L+L + R + R + R+
Sbjct: 72 RVEGKITRIIDN-GFAMTVGATPRKRDKLAAQLTWLANRDILNLPEDRRHDRIVPRNPI- 129
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
+ L L D ++ +C++ID+S SG +++ + + M S+V + RVVR G A+EF
Sbjct: 130 -SLLTLQDGSRMTCRIIDMSRSGAAIAAEHRPPMNSQVSLGRVQARVVRYLEDGFALEFV 188
Query: 191 SVQESNIAFKSLI 203
Q S+
Sbjct: 189 HEQLEETLEDSVT 201
>gi|316933323|ref|YP_004108305.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris DX-1]
gi|315601037|gb|ADU43572.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris DX-1]
Length = 203
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+++R FQRVKV L GR++L D E+ C V +SPGGL ++ + VG+R I +++ VG
Sbjct: 13 LERRRFQRVKVHLLGRYMLPDRREFPCQVINMSPGGLAMLAPG-IGNVGDRVIAYLDHVG 71
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
R+EGK+ N G+A+ + + +R KLA +L WLAN+D L+L + R + R + R+
Sbjct: 72 RVEGKITRIIDN-GFAMTLAATPRKRDKLAAQLTWLANRDILNLPEDRRHDRIVPRNPI- 129
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
A L L+D ++ SC++ID+S SG +++ + + + ++VL + RVVR G A+EF
Sbjct: 130 -AILTLDDGSRMSCRIIDMSRSGAAIAAEHRPPLHAQVLLGRVASRVVRHLDDGFALEFI 188
Query: 191 SVQESNIAFKSLI 203
Q S+
Sbjct: 189 HEQLEETLEDSVT 201
>gi|90424624|ref|YP_532994.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris BisB18]
gi|90106638|gb|ABD88675.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris BisB18]
Length = 204
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 72/192 (37%), Positives = 114/192 (59%), Gaps = 4/192 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
++R FQRVKV L GR++L D E+ C V +SPGGL ++ + VG+R I +++ +GR
Sbjct: 15 ERRRFQRVKVHLLGRYMLPDRREFPCQVINMSPGGLAMLAPG-IGNVGDRVIAYLDHIGR 73
Query: 72 IEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVD 131
+EGK+ N G+A+ + + +R KLA +L WLAN+D L+L + R + R + R+
Sbjct: 74 VEGKITRIIDN-GFAMTVGATPRKRDKLAAQLTWLANRDILNLPEDRRHDRIVPRNPI-- 130
Query: 132 AQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSS 191
+ L L D +K SC++ID+S SG ++S D + + S+V + RVVR G A+EF
Sbjct: 131 SILTLEDGSKQSCRIIDMSRSGAAISADFRPTLNSQVALGRVQARVVRHLDDGFALEFIH 190
Query: 192 VQESNIAFKSLI 203
Q + S+
Sbjct: 191 EQIAETLEDSVT 202
>gi|192292269|ref|YP_001992874.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris TIE-1]
gi|192286018|gb|ACF02399.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris TIE-1]
Length = 203
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+++R FQRVKV L GR++L D E+ C V +SPGGL ++ + VG+R I +++ VG
Sbjct: 13 LERRRFQRVKVHLLGRYMLPDRREFPCQVINMSPGGLALLAPG-IGNVGDRVIAYLDHVG 71
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
R+EGK+ N G+A+ + + +R KLA +L WLAN+D L+L + R + R + R+
Sbjct: 72 RVEGKITRIIDN-GFAMTVAATPRKRDKLAAQLTWLANRDILNLPEDRRHDRIVPRNPI- 129
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
A L L+D ++ SC++ID+S SG +++ + + + ++VL + RVVR G A+EF
Sbjct: 130 -AVLTLDDGSRMSCRIIDMSRSGAAIAAEQRPPLNAQVLLGRVASRVVRHLDDGFALEFV 188
Query: 191 SVQESNIAFKSLI 203
Q S+
Sbjct: 189 HEQLEETLEDSVT 201
>gi|92118084|ref|YP_577813.1| hypothetical protein Nham_2571 [Nitrobacter hamburgensis X14]
gi|91800978|gb|ABE63353.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 202
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 66/193 (34%), Positives = 115/193 (59%), Gaps = 4/193 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+++R FQRV+V L GR++L D E+ C + +SPGGL ++ + VG+R +V+++ +G
Sbjct: 12 VERRRFQRVRVHLLGRYMLPDRREFPCQIINMSPGGLAMLAPG-IGNVGDRVVVYLDHIG 70
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
R+EGK+ + G+A+ + + +R +LA +L WLAN+D L+L + R + R + R
Sbjct: 71 RVEGKITRII-DSGFAMSVGATPRKRDRLAAQLTWLANRDILNLPEDRRHDRIVPRSPIT 129
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
L L D T+ +C++ID+S SG ++S + + + S+V +L RVVR G A+EF
Sbjct: 130 --TLTLEDGTRMTCRIIDLSMSGAAISAETRPPLQSRVALGKVLARVVRNLEDGFALEFV 187
Query: 191 SVQESNIAFKSLI 203
Q + ++
Sbjct: 188 HEQHPDTLEDNVT 200
>gi|115524336|ref|YP_781247.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris BisA53]
gi|115518283|gb|ABJ06267.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris BisA53]
Length = 222
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEK 68
+ ++R FQRVK+ L GR++L D E+ C V ++SPGGL ++ + VG+R I +++
Sbjct: 30 RTEERRRFQRVKLHLLGRYMLPDRREFPCQVIDMSPGGLAMLAPG-IGNVGDRVIAYLDH 88
Query: 69 VGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDR 128
+GR+EGK+ N G+A+ + + +R KLA +L WLAN+D L+L + R + R + R+
Sbjct: 89 IGRVEGKITRIIDN-GFAMTVGATPRKRDKLAAQLTWLANRDILNLPEDRRHDRLVPRNP 147
Query: 129 EVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIE 188
A L + D +KHSC++ID+S SG ++S + + + ++VL + RVVR G A+E
Sbjct: 148 I--AMLSMQDGSKHSCRIIDMSRSGAAISAEFRPPLQAEVLLGRVQARVVRHLEDGFALE 205
Query: 189 FSSVQESNIAFKSLI 203
F Q + S+
Sbjct: 206 FVHEQLEDTLEDSVS 220
>gi|118591266|ref|ZP_01548665.1| type IV pilus assembly PilZ [Stappia aggregata IAM 12614]
gi|118436342|gb|EAV42984.1| type IV pilus assembly PilZ [Stappia aggregata IAM 12614]
Length = 213
Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats.
Identities = 70/200 (35%), Positives = 121/200 (60%), Gaps = 4/200 (2%)
Query: 4 GIHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSI 63
G +LQ D+R QRV+V++ GRF+L D EY C V ++SPGG+ ++ V VGER I
Sbjct: 13 GSRSLQVTDRRRHQRVQVNILGRFMLEDRREYPCQVIDMSPGGMAMITPV-TGRVGERVI 71
Query: 64 VFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRK 123
+++ + R+EG + G+AV + + +R K+A+ L WLAN+D+L+L + R + R
Sbjct: 72 AYLDHLSRVEGTISRLIDG-GFAVELRNTVRKRDKIANVLTWLANRDELNLPEDRRHDRF 130
Query: 124 ITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPG 183
+ ++ +++L D ++H C++ID+S SG +++ D+ EM + + RV+R G
Sbjct: 131 VPKNPMT--KMILPDGSEHVCRIIDVSLSGAAIATDILPEMGDPITLGKMHARVIRRIEG 188
Query: 184 GIAIEFSSVQESNIAFKSLI 203
GIA+EF++VQ + +
Sbjct: 189 GIAVEFAAVQSRELLEHHIS 208
Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 104 IWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIE 163
L + D R + R + + +L D ++ C+VID+S G+++ +
Sbjct: 9 TATEGSRSLQVTDRRRHQRV---QVNILGRFMLEDRREYPCQVIDMSPGGMAMITPVTGR 65
Query: 164 MFSKVL-----FNDILGRVVRIFPGGIAIE 188
+ +V+ + + G + R+ GG A+E
Sbjct: 66 VGERVIAYLDHLSRVEGTISRLIDGGFAVE 95
>gi|254504045|ref|ZP_05116196.1| Type IV pilus assembly protein PilZ [Labrenzia alexandrii DFL-11]
gi|222440116|gb|EEE46795.1| Type IV pilus assembly protein PilZ [Labrenzia alexandrii DFL-11]
Length = 212
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 70/200 (35%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 4 GIHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSI 63
G +LQ D+R QRV+V++ GRF+L D EY C V ++SPGG+ ++ V VGER +
Sbjct: 12 GSKSLQVTDRRRHQRVQVNILGRFMLEDRREYPCQVIDMSPGGMAMITPVS-GKVGERVV 70
Query: 64 VFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRK 123
+++ + R+EG++ G+AV + + +R K+A+ L WLAN+D+L+L + R + R
Sbjct: 71 AYLDHLSRVEGRISRLIDG-GFAVELRNTVRKRDKIANVLTWLANRDELNLPEDRRHDRF 129
Query: 124 ITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPG 183
+ +++ +++L D T+H C++ D+S SG +++ D+ EM ++ + RVVR G
Sbjct: 130 VPKNQMT--KMILPDGTEHVCRIFDVSLSGAAIATDILPEMGDQITLGKMRARVVRQIEG 187
Query: 184 GIAIEFSSVQESNIAFKSLI 203
GIA+EF++VQ + +
Sbjct: 188 GIAVEFAAVQSRELLEHHIT 207
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 107 ANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFS 166
L + D R + R + + +L D ++ C+VID+S G+++ + ++
Sbjct: 11 EGSKSLQVTDRRRHQRV---QVNILGRFMLEDRREYPCQVIDMSPGGMAMITPVSGKVGE 67
Query: 167 KVL-----FNDILGRVVRIFPGGIAIE 188
+V+ + + GR+ R+ GG A+E
Sbjct: 68 RVVAYLDHLSRVEGRISRLIDGGFAVE 94
>gi|328543254|ref|YP_004303363.1| Type IV pilus assembly PilZ [polymorphum gilvum SL003B-26A1]
gi|326413000|gb|ADZ70063.1| Type IV pilus assembly PilZ [Polymorphum gilvum SL003B-26A1]
Length = 212
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFV 66
+ ID+R QRV +++ GRF+L + EY C V +SPGG+ ++ V VGER + ++
Sbjct: 14 TAKGIDRRRHQRVAINVLGRFMLENRQEYPCQVINMSPGGVAMITPVS-GRVGERVVAYL 72
Query: 67 EKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITR 126
+ +GR+EG + G+A+ + ++ +R KLA+ L WLAN+++L+L + R + R + +
Sbjct: 73 DHIGRVEGTIAREIEG-GFAIALHNTQRKRDKLANILTWLANRNELNLPEDRRHDRFVPK 131
Query: 127 DREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIA 186
+ ++VL D T C+++D+S SG +++ + + ++V + R+VR GIA
Sbjct: 132 NPMT--RMVLPDGTSFMCRLLDVSLSGAALACTARPPLGTEVALGKMRARIVRHTEDGIA 189
Query: 187 IEFSSVQESNIAFKSLI 203
+EF+++Q ++ + +
Sbjct: 190 VEFAAIQNRDLLEQHIS 206
>gi|75676353|ref|YP_318774.1| hypothetical protein Nwi_2168 [Nitrobacter winogradskyi Nb-255]
gi|74421223|gb|ABA05422.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 214
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 115/193 (59%), Gaps = 4/193 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+++R FQRV+V L GR++L D E+ C V +SPGGL ++ + VG+R IV+++ +G
Sbjct: 24 VERRRFQRVRVHLLGRYMLPDRREFPCQVINMSPGGLAMLAPG-IGHVGDRVIVYLDHIG 82
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
R+EG++ + G+A+ I + +R KLA +L WLAN+D L+L + R + R + R+
Sbjct: 83 RVEGRITRII-DSGFAMNISATPRKRDKLASQLTWLANRDILNLPEDRRHDRIMPRNPI- 140
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
A L L D T+ +C++ID+S SG +VS + + S+V +L RVVR G A+EF
Sbjct: 141 -AILTLEDGTRMTCRIIDLSMSGAAVSAEKTPPLQSRVALGKVLSRVVRNLEEGFALEFI 199
Query: 191 SVQESNIAFKSLI 203
Q + +
Sbjct: 200 HEQHPDTLEDDVT 212
>gi|209884668|ref|YP_002288525.1| type IV pilus assembly PilZ [Oligotropha carboxidovorans OM5]
gi|209872864|gb|ACI92660.1| type IV pilus assembly PilZ [Oligotropha carboxidovorans OM5]
Length = 204
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 113/195 (57%), Gaps = 4/195 (2%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEK 68
Q ++R FQRV++ L GR++L D EY C +SPGGL ++ + +GER + +++
Sbjct: 11 QAEERRRFQRVRIHLLGRYMLSDRREYPCQAINMSPGGLALLAPG-IGSIGERVVAYLDH 69
Query: 69 VGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDR 128
+GR+EGK+ N G+A+ + + +R KLA +L WLAN++ L+L + R + R + R+
Sbjct: 70 IGRVEGKITRLLDN-GFAMTVNATPRKREKLAAQLTWLANREILNLPEDRRHDRIVPRNA 128
Query: 129 EVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIE 188
L L+D ++ C++ID+S SG ++S ++ + + V+ + RVVR G AIE
Sbjct: 129 SGL--LKLSDGSEMPCRIIDLSLSGAALSGAMRPLVGTDVMLGRVAARVVRHLEEGFAIE 186
Query: 189 FSSVQESNIAFKSLI 203
F+ Q ++
Sbjct: 187 FNHPQSLETVEDNVT 201
Score = 49.5 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 44/107 (41%), Gaps = 9/107 (8%)
Query: 103 LIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQI 162
+ + K ++ R + R + + +L+D ++ C+ I++S G+++
Sbjct: 1 MALVQRKFQPQAEERRRFQRV---RIHLLGRYMLSDRREYPCQAINMSPGGLALLAPGIG 57
Query: 163 EMFSKVL-----FNDILGRVVRIFPGGIAIEF-SSVQESNIAFKSLI 203
+ +V+ + G++ R+ G A+ ++ ++ L
Sbjct: 58 SIGERVVAYLDHIGRVEGKITRLLDNGFAMTVNATPRKREKLAAQLT 104
>gi|222086060|ref|YP_002544592.1| hypothetical protein Arad_2484 [Agrobacterium radiobacter K84]
gi|221723508|gb|ACM26664.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 209
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
DQR FQRV ++++GR +L EY C+V E+SPG + + C + ER + +++ +GR
Sbjct: 23 DQRTFQRVPINMQGRLMLASYEEYECLVTEMSPGDMYVTC-LGRPRANERIVAYIDHLGR 81
Query: 72 IEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVD 131
+EG VV RG+++ I ++ +R KLA +L WLANK +L L + R + R R
Sbjct: 82 VEGNVVAV-DGRGFSMSINATDRKREKLAAQLTWLANKHELGLPEDRRHDRLTPR--STT 138
Query: 132 AQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSS 191
++L L D T + C+++D+S SG +V V+ + + + V ++ GRVVR F G+AIEF S
Sbjct: 139 SELTLEDGTLYVCRIMDLSLSGAAVDVEARPPIGTPVRLGNMRGRVVRHFMEGVAIEFLS 198
Query: 192 VQESNIA 198
+Q
Sbjct: 199 LQSRETL 205
>gi|319783235|ref|YP_004142711.1| type IV pilus assembly PilZ [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169123|gb|ADV12661.1| type IV pilus assembly PilZ [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 205
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 68/192 (35%), Positives = 115/192 (59%), Gaps = 4/192 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
++R FQRV+V + GRF+L D TE+ C V ++SPG + D + + GE+ I +++ +G
Sbjct: 13 AERRNFQRVRVKIYGRFMLEDRTEHPCQVVDMSPGNVAFRTD-RIGMPGEKIIAYIDHIG 71
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
RIEG V + G+A+ ++ S+ ++ KLA +L WLANK +L L + R + R R+
Sbjct: 72 RIEGVVTRTLQD-GFAMTVIASDRKKDKLAAQLTWLANKHELDLPEDRRHERVAPRNP-- 128
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
+ L L D ++ C++ID+S SG +V +D++ + +V+ + G+VVR F G+AIEF+
Sbjct: 129 TSVLQLTDGRQYQCRIIDLSLSGAAVEIDVKPAIGIQVMLGTMRGQVVRHFEDGVAIEFA 188
Query: 191 SVQESNIAFKSL 202
+Q
Sbjct: 189 VIQRPETLDSEF 200
>gi|299135313|ref|ZP_07028504.1| type IV pilus assembly PilZ [Afipia sp. 1NLS2]
gi|298590290|gb|EFI50494.1| type IV pilus assembly PilZ [Afipia sp. 1NLS2]
Length = 204
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 67/195 (34%), Positives = 111/195 (56%), Gaps = 4/195 (2%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEK 68
Q ++R FQRVK+ L GR++L D EY C +SPGGL ++ + +GER + +++
Sbjct: 11 QAEERRHFQRVKIHLLGRYMLSDRREYPCQAINMSPGGLALLAPG-IGNLGERVVAYLDH 69
Query: 69 VGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDR 128
+GR+EGK+ N G+A+ + + +R KLA +L WLAN++ L+L + R + R + R+
Sbjct: 70 IGRVEGKITRLLDN-GFAMTVSATPRKREKLAAQLTWLANREILNLPEDRRHDRIVPRNA 128
Query: 129 EVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIE 188
L L + C++ID+S SG ++S ++ E+ S V+ + RVVR G AIE
Sbjct: 129 MGW--LRLEGGGEMQCRIIDLSLSGAALSGQMRPEVGSHVMLGRVAARVVRHLEEGFAIE 186
Query: 189 FSSVQESNIAFKSLI 203
F+ Q ++
Sbjct: 187 FNHPQVLETVEDNVT 201
>gi|260460730|ref|ZP_05808980.1| type IV pilus assembly PilZ [Mesorhizobium opportunistum WSM2075]
gi|259033307|gb|EEW34568.1| type IV pilus assembly PilZ [Mesorhizobium opportunistum WSM2075]
Length = 205
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 67/192 (34%), Positives = 114/192 (59%), Gaps = 4/192 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
++R FQRV+V + GRF+L D TE+ C V ++SPG + D + + GE+ I +++ +G
Sbjct: 13 AERRNFQRVRVKIYGRFMLEDRTEHPCQVVDMSPGNVAFRTD-RIGMPGEKVIAYIDHIG 71
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
RIEG V + G+A+ ++ S+ ++ KLA +L WLANK +L L + R + R R+
Sbjct: 72 RIEGVVTRTLQD-GFAMTVIASDRKKDKLAAQLTWLANKHELDLPEDRRHERVAPRNP-- 128
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
+ L L D ++ C++ID+S SG +V +D++ + +V + G++VR F G+AIEF+
Sbjct: 129 TSVLQLTDGRQYQCRIIDLSLSGAAVEIDVKPAIGVQVTLGTMRGQIVRHFEDGVAIEFA 188
Query: 191 SVQESNIAFKSL 202
+Q
Sbjct: 189 VIQRPETLDSEF 200
>gi|13470468|ref|NP_102037.1| hypothetical protein mll0185 [Mesorhizobium loti MAFF303099]
gi|14021210|dbj|BAB47823.1| mll0185 [Mesorhizobium loti MAFF303099]
Length = 205
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 66/192 (34%), Positives = 115/192 (59%), Gaps = 4/192 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
++R FQRV+V + GRF+L D TE+ C V ++SPG + D + + GE+ I +++ +G
Sbjct: 13 AERRNFQRVRVKIYGRFMLEDRTEHPCQVVDMSPGNVAFRTD-RIGMPGEKVIAYIDHIG 71
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
RIEG V + G+A+ ++ S+ ++ KLA +L WLANK +L L + R + R R+
Sbjct: 72 RIEGVVTRTLQD-GFAMTVIASDRKKDKLAAQLTWLANKHELDLPEDRRHERVAPRNP-- 128
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
+ L L D ++ C++ID+S SG ++ +D++ + +V+ + G++VR F G+AIEF+
Sbjct: 129 TSVLQLTDGRQYQCRIIDLSLSGAAIEIDVKPAIGVQVMLGTMRGQIVRHFEDGVAIEFA 188
Query: 191 SVQESNIAFKSL 202
+Q
Sbjct: 189 VIQRPETLDSEF 200
>gi|110634076|ref|YP_674284.1| type IV pilus assembly PilZ [Mesorhizobium sp. BNC1]
gi|110285060|gb|ABG63119.1| type IV pilus assembly PilZ [Chelativorans sp. BNC1]
Length = 202
Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats.
Identities = 62/192 (32%), Positives = 108/192 (56%), Gaps = 4/192 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
++R FQRVK+ + GR++L D +E++C V ++SPG + + VGER + +++ +G
Sbjct: 14 TERRRFQRVKISIYGRYMLPDRSEHSCRVVDMSPGSVALKAAQA-GQVGERIVAYLDHIG 72
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
R+EG + + G+ + I S+ +R KLA +L WLAN+ DL L + R Y R +
Sbjct: 73 RVEGYLARIFED-GFEMTIKASQRKRDKLASQLTWLANRHDLDLPEDRRYERVTPANPM- 130
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
+ + D +H C+++D+S SG ++ + + ++V ++ GRV R F G A+EFS
Sbjct: 131 -STIRTPDGYEHPCRIVDLSASGAAIETAPRPAIGTQVFLANLRGRVTRHFENGFALEFS 189
Query: 191 SVQESNIAFKSL 202
+QE
Sbjct: 190 LIQEPATLLAQF 201
>gi|307945505|ref|ZP_07660841.1| type IV pilus assembly PilZ [Roseibium sp. TrichSKD4]
gi|307771378|gb|EFO30603.1| type IV pilus assembly PilZ [Roseibium sp. TrichSKD4]
Length = 216
Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 119/198 (60%), Gaps = 4/198 (2%)
Query: 6 HNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVF 65
LQ +D+R QRVKV++ GR++L D EY C V ++SPGG+ ++ V VGER + +
Sbjct: 15 RTLQALDKRRHQRVKVNILGRYMLEDRREYPCQVIDMSPGGMALIAPVS-GQVGERIVAY 73
Query: 66 VEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKIT 125
++++ R+EGK+ G+AV + S +R K+A L WLANK+ L L + R + R I
Sbjct: 74 LDQMSRVEGKITRTFDG-GFAVELRNSVRKRDKIASILTWLANKEALDLPEDRRHDRFIP 132
Query: 126 RDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGI 185
++ ++ L D T+H+C++ D+S SG ++S DL +E + + RVVR GGI
Sbjct: 133 KN--TLTRIKLPDGTEHTCRISDLSLSGAAISTDLDVEAGDAIEIGKMSARVVRRIEGGI 190
Query: 186 AIEFSSVQESNIAFKSLI 203
A+EF VQ ++ +++
Sbjct: 191 AVEFGEVQNRDLLERTIT 208
>gi|190891887|ref|YP_001978429.1| hypothetical protein RHECIAT_CH0002296 [Rhizobium etli CIAT 652]
gi|190697166|gb|ACE91251.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 203
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 114/187 (60%), Gaps = 4/187 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
+Q FQRV ++++GR +L + E+ C+V ++SPG + + C ER + +++ +GR
Sbjct: 17 EQGVFQRVPINMQGRLMLANYEEFECMVIDMSPGDMYVTCPG-RPRANERVVAYIDHLGR 75
Query: 72 IEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVD 131
+EG V RG+ + I +E +R KLA +L WLANK +L L + R + R RD +
Sbjct: 76 VEGYV-QTLDGRGFTMSINATERKREKLAAQLTWLANKHELGLPEDRRHDRLTPRDIKT- 133
Query: 132 AQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSS 191
+L L+D T+++C+++D+S SG ++ V+++ + + V ++ GRVVR F G+AIEF S
Sbjct: 134 -ELTLDDGTRYACRIMDLSLSGAAIDVEMRPSIGTAVRLGNMRGRVVRHFVEGVAIEFLS 192
Query: 192 VQESNIA 198
+Q
Sbjct: 193 IQSRETL 199
>gi|241204776|ref|YP_002975872.1| type IV pilus assembly PilZ [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858666|gb|ACS56333.1| type IV pilus assembly PilZ [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 203
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 113/187 (60%), Gaps = 4/187 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
+Q FQRV ++++GR +L + E+ C+V ++SPG + + C + ER + +++ +GR
Sbjct: 17 EQGVFQRVPINMQGRLMLANYEEFECMVIDMSPGDMYVTC-LGRPRANERVVAYIDHLGR 75
Query: 72 IEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVD 131
+EG V RG+ + I ++ +R KLA +L WLANK +L L + R + R RD + D
Sbjct: 76 VEGYV-QTIDGRGFTMSINATDRKREKLAAQLTWLANKHELGLPEDRRHDRLTPRDTKTD 134
Query: 132 AQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSS 191
L L D T +SC+++D+S SG +V V+++ + + V ++ GRVVR F G+AIEF S
Sbjct: 135 --LTLEDGTLYSCRIMDLSLSGAAVDVEMRPSIGTAVRLGNMRGRVVRHFVEGVAIEFLS 192
Query: 192 VQESNIA 198
+Q
Sbjct: 193 IQSRETL 199
>gi|222148624|ref|YP_002549581.1| hypothetical protein Avi_2200 [Agrobacterium vitis S4]
gi|221735610|gb|ACM36573.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 203
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 114/186 (61%), Gaps = 4/186 (2%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRI 72
QRAFQRV V L+GR ++ EY C+ ++SPG + ++C + GER I +++ +GRI
Sbjct: 18 QRAFQRVSVSLEGRLMVPSEDEYVCLTVDMSPGDVRVICA-ARPVPGERIIAYIDHIGRI 76
Query: 73 EGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDA 132
EG V+ + G+ + IV +E +R KLA +L W+ANK +L L + R + R +
Sbjct: 77 EGTVIKTTDD-GFVISIVATERKREKLAAQLTWIANKHELGLPEDRRHDRLTPKQPRT-- 133
Query: 133 QLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSV 192
+LV +D K+SC+++D+S SG ++ +D++ + + V + GRVVR F G+AIEF+++
Sbjct: 134 ELVFDDGRKYSCRIMDLSLSGAAIDIDIRPPLGTAVRLGSMRGRVVRHFLEGVAIEFTTL 193
Query: 193 QESNIA 198
Q
Sbjct: 194 QSREAL 199
>gi|116252283|ref|YP_768121.1| hypothetical protein RL2537 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256931|emb|CAK08025.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 203
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 113/187 (60%), Gaps = 4/187 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
+Q FQRV ++++GR +L + E+ C+V ++SPG + + C + ER + +++ +GR
Sbjct: 17 EQGVFQRVPINMQGRLMLANYEEFECMVIDMSPGDMYVTC-LGRPRANERVVAYIDHLGR 75
Query: 72 IEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVD 131
+EG V RG+ + I ++ +R KLA +L WLANK +L L + R + R RD
Sbjct: 76 VEGYV-QTIDGRGFTMSINATDRKREKLAAQLTWLANKHELGLPEDRRHDRLTPRD--TK 132
Query: 132 AQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSS 191
+L L D T++SC+++D+S SG +V V+++ + + V ++ GRVVR F G+AIEF S
Sbjct: 133 TELTLEDGTRYSCRIMDLSLSGAAVDVEMRPSIGTAVRLGNMRGRVVRHFVEGVAIEFLS 192
Query: 192 VQESNIA 198
+Q
Sbjct: 193 IQSRETL 199
>gi|209549449|ref|YP_002281366.1| type IV pilus assembly PilZ [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535205|gb|ACI55140.1| type IV pilus assembly PilZ [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 203
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 113/187 (60%), Gaps = 4/187 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
+Q FQRV ++++GR +L E+ C+V ++SPG + + C + ER + +++ +GR
Sbjct: 17 EQGVFQRVPINMQGRLMLASYEEFECMVIDMSPGDMYVTC-LGRPRTNERVVAYIDHLGR 75
Query: 72 IEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVD 131
+EG V RG+ + I +E +R KLA +L WLANK +L L + R + R RD +
Sbjct: 76 VEGYV-QTLDGRGFTMSINATERKREKLAAQLTWLANKHELGLPEDRRHDRLTPRD--TN 132
Query: 132 AQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSS 191
+L L D T+++C+++D+S SG +V V+++ + + V ++ GRVVR F G+AIEF S
Sbjct: 133 TELTLEDGTRYTCRIMDLSLSGAAVDVEMRPSIGTAVRLGNMRGRVVRHFVEGVAIEFLS 192
Query: 192 VQESNIA 198
+Q
Sbjct: 193 IQSRETL 199
>gi|218462807|ref|ZP_03502898.1| hypothetical protein RetlK5_26662 [Rhizobium etli Kim 5]
Length = 203
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 114/187 (60%), Gaps = 4/187 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
+Q FQRV ++++GR +L + E+ C+V ++SPG + + C ER + +++ +GR
Sbjct: 17 EQGVFQRVPINMQGRLMLANYEEFECMVIDMSPGDMYVTCSG-RPRANERVVAYIDHLGR 75
Query: 72 IEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVD 131
+EG V RG+ + I +E +R KLA +L WLANK +L L + R + R RD V
Sbjct: 76 VEGYV-QMLDGRGFTMSINATERKREKLAAQLTWLANKHELGLPEDRRHDRLTPRD--VK 132
Query: 132 AQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSS 191
+L L+D T+++C+++D+S SG +V V+++ + + V ++ GRVVR F G+AIEF S
Sbjct: 133 TELTLDDGTRYACRIMDLSLSGAAVDVEMRPSIGTAVRLGNMRGRVVRHFVEGVAIEFLS 192
Query: 192 VQESNIA 198
+Q
Sbjct: 193 IQSRETL 199
>gi|39936483|ref|NP_948759.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris CGA009]
gi|39650339|emb|CAE28861.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 183
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 66/184 (35%), Positives = 108/184 (58%), Gaps = 4/184 (2%)
Query: 20 KVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNF 79
KV L GR++L D E+ C V +SPGGL ++ + VG+R I +++ VGR+EGK+
Sbjct: 2 KVHLLGRYMLPDRREFPCQVINMSPGGLALLAPG-IGNVGDRVIAYLDHVGRVEGKITRI 60
Query: 80 DSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDN 139
N G+A+ + + +R KLA +L WLAN+D L+L + R + R + R+ A L L+D
Sbjct: 61 IDN-GFAMTVAATPRKRDKLAAQLTWLANRDILNLPEDRRHDRIVPRNPI--AVLTLDDG 117
Query: 140 TKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSVQESNIAF 199
++ SC++ID+S SG +++ + + + ++VL + RVVR G A+EF Q
Sbjct: 118 SRMSCRIIDMSRSGAAIAAEQRPPLNAQVLLGRVASRVVRHLDDGFALEFVHEQLEETLE 177
Query: 200 KSLI 203
S+
Sbjct: 178 DSVT 181
Score = 40.6 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 12 DQRAFQR-VKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+ R R V + L DG+ +C + ++S G I + L + +G
Sbjct: 96 EDRRHDRIVPRNPIAVLTLDDGSRMSCRIIDMSRSGAAIAAEQRPPLNAQVL------LG 149
Query: 71 RIEGKVVNFDSNRGYAVRI 89
R+ +VV + G+A+
Sbjct: 150 RVASRVVRHLDD-GFALEF 167
>gi|220924974|ref|YP_002500276.1| type IV pilus assembly PilZ [Methylobacterium nodulans ORS 2060]
gi|219949581|gb|ACL59973.1| type IV pilus assembly PilZ [Methylobacterium nodulans ORS 2060]
Length = 209
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 70/200 (35%), Positives = 117/200 (58%), Gaps = 4/200 (2%)
Query: 4 GIHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSI 63
G+ + D+R RV + L GR++L D EY C +ISPGG+ +VC VP +GER +
Sbjct: 13 GLLAARVADRRRHHRVAIALLGRYMLADRREYPCQTVDISPGGVRLVCAVP-GEIGERVV 71
Query: 64 VFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRK 123
+++E +GR+EG + + G+AV + + ++R K+A +L WLAN+ L L + R + R
Sbjct: 72 IYLEHLGRLEGTISRILPD-GFAVALSATPHKREKIASQLTWLANRASLGLPEDRRHERV 130
Query: 124 ITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPG 183
+ R V L L+D ++ ++ID+S SG +++ DL + + S +L RVVR F G
Sbjct: 131 VPRQSAV--TLRLDDGSEVPARLIDVSLSGAALACDLPLPVDSPLLIGRTACRVVRQFKG 188
Query: 184 GIAIEFSSVQESNIAFKSLI 203
G+A+EF + ++L+
Sbjct: 189 GLAVEFRLPLSPDRFDENLV 208
>gi|15965167|ref|NP_385520.1| hypothetical protein SMc00999 [Sinorhizobium meliloti 1021]
gi|307309181|ref|ZP_07588852.1| type IV pilus assembly PilZ [Sinorhizobium meliloti BL225C]
gi|307321511|ref|ZP_07600906.1| type IV pilus assembly PilZ [Sinorhizobium meliloti AK83]
gi|15074347|emb|CAC45993.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|306892818|gb|EFN23609.1| type IV pilus assembly PilZ [Sinorhizobium meliloti AK83]
gi|306900327|gb|EFN30943.1| type IV pilus assembly PilZ [Sinorhizobium meliloti BL225C]
Length = 202
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
+ AFQRV V+L GR +L EY+C E+SPG + + GER I +V+ VGR
Sbjct: 16 QESAFQRVSVNLSGRLMLASHEEYDCTALEMSPGDVLLTSP-ARPRGGERIIAYVDHVGR 74
Query: 72 IEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVD 131
+EG V + + +++ +E +R KLA +L W+ANK +L L + R + R R +
Sbjct: 75 LEGTVSRVADDA-FVIQLNATERKREKLAAQLTWIANKHELGLPEDRRHDRLAPR--KTL 131
Query: 132 AQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSS 191
+L ++ ++SC++ID+S SG +V +D + + S V ++ GR+VR F G+AIEFS
Sbjct: 132 TELTVDTGERYSCRIIDLSLSGAAVDIDTRPAVGSPVRLGNMKGRIVRHFQEGVAIEFSG 191
Query: 192 VQESNIA 198
+Q
Sbjct: 192 IQSREAL 198
>gi|150396264|ref|YP_001326731.1| type IV pilus assembly PilZ [Sinorhizobium medicae WSM419]
gi|150027779|gb|ABR59896.1| type IV pilus assembly PilZ [Sinorhizobium medicae WSM419]
Length = 202
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 109/190 (57%), Gaps = 4/190 (2%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEK 68
+ + AFQRV V+L GR +L EY C E+SPG + GER I +V+
Sbjct: 13 KAYQESAFQRVAVNLSGRLMLASHEEYACTAVEMSPGDVLFTSP-ARPRGGERIIAYVDH 71
Query: 69 VGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDR 128
VGR+EG V S+ + +++ +E +R KLA +L W+ANK +L L + R + R R
Sbjct: 72 VGRLEGTVSRV-SDDAFVIQLNATERKREKLAAQLTWIANKHELGLPEDRRHDRLAPR-- 128
Query: 129 EVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIE 188
+V +L ++ ++SC++ID+S SG +V VD++ + + V ++ GR+VR F G+AIE
Sbjct: 129 KVLTELSVDSGERYSCRIIDLSLSGAAVDVDIRPAIGAPVKLGNMKGRIVRHFQEGVAIE 188
Query: 189 FSSVQESNIA 198
FS +Q
Sbjct: 189 FSGIQSREAL 198
>gi|23009259|ref|ZP_00050375.1| hypothetical protein Magn03004185 [Magnetospirillum magnetotacticum
MS-1]
Length = 208
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 65/198 (32%), Positives = 114/198 (57%), Gaps = 4/198 (2%)
Query: 6 HNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVF 65
++ DQR QRV+ L GR++L D EY C ++SPGG+ + C V + +GER +++
Sbjct: 14 LAIRAADQRRHQRVRTTLLGRYMLADRREYPCQTVDMSPGGVRLTCAV-LGELGERVVLY 72
Query: 66 VEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKIT 125
++++GR+EG+VV +G+A+RI + +R K+A +L+W+AN++ L L + R+ R I
Sbjct: 73 LDQIGRLEGEVVRHV-PQGFAMRINATPRKREKIASQLMWIANRESLGLPEGRSQERLIP 131
Query: 126 RDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGI 185
V L L + +++DIS SG +++ Q+ + + ++ GRVVR F GGI
Sbjct: 132 TQPGV--TLRLENGNVIPARIVDISMSGAALATRSQVPIGTHLMVGSTPGRVVRHFEGGI 189
Query: 186 AIEFSSVQESNIAFKSLI 203
+F + + +I
Sbjct: 190 GAQFMLPISPDRFHEGII 207
>gi|170751021|ref|YP_001757281.1| type IV pilus assembly PilZ [Methylobacterium radiotolerans JCM
2831]
gi|170657543|gb|ACB26598.1| type IV pilus assembly PilZ [Methylobacterium radiotolerans JCM
2831]
Length = 213
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 107/188 (56%), Gaps = 4/188 (2%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEK 68
DQR QRV+V + GR++L D EY C ++SPGG+ + C V VGER ++++E
Sbjct: 22 GAADQRRHQRVRVAVLGRYMLADRREYPCQTVDMSPGGVRLTCAV-KGEVGERVVLYLEH 80
Query: 69 VGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDR 128
+GRIEG V + G+AV++ + +R KLA +L WLAN++ L L + R++ R + +
Sbjct: 81 IGRIEGVVARTCPD-GFAVQLNATSRKRDKLASQLTWLANREMLGLPEGRSHERLVPTNT 139
Query: 129 EVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIE 188
V L + + ++IDIS SGV++S + + + + V GR+VR F GG ++
Sbjct: 140 AV--VLRVEGGREIRARLIDISMSGVAISCPVPLPLGAAVTVGSTPGRLVRYFEGGFGVQ 197
Query: 189 FSSVQESN 196
F +
Sbjct: 198 FLLPLSPD 205
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 106 LANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMF 165
LA + D R + R V + +L D ++ C+ +D+S GV ++ ++ E+
Sbjct: 15 LAAEPARGAADQRRHQRV---RVAVLGRYMLADRREYPCQTVDMSPGGVRLTCAVKGEVG 71
Query: 166 SKVL-----FNDILGRVVRIFPGGIAIEF-SSVQESNIAFKSLI 203
+V+ I G V R P G A++ ++ ++ + L
Sbjct: 72 ERVVLYLEHIGRIEGVVARTCPDGFAVQLNATSRKRDKLASQLT 115
>gi|188581467|ref|YP_001924912.1| type IV pilus assembly PilZ [Methylobacterium populi BJ001]
gi|179344965|gb|ACB80377.1| type IV pilus assembly PilZ [Methylobacterium populi BJ001]
Length = 207
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 106/187 (56%), Gaps = 4/187 (2%)
Query: 10 FIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKV 69
+QR QRV+ L GR++L D EY C ++SPGG+ + C V + +GER ++++E++
Sbjct: 17 AAEQRRHQRVRATLLGRYMLADRREYPCQTVDMSPGGVRLTCAV-IGALGERVVLYLEQI 75
Query: 70 GRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDRE 129
GR+EG +V G+A+RI + +R K+A +L+WLAN++ L L + R R +
Sbjct: 76 GRLEGVIVRH-PPGGFAMRINATPRKRDKIASQLMWLANRESLGLPEGRTNERLVPNQPG 134
Query: 130 VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEF 189
V L L + + ++IDIS SGV+++ + + +L GRVVR F GGI +F
Sbjct: 135 V--TLRLENGRFIAARIIDISMSGVALATASAPPIGTHLLVGSTPGRVVRYFEGGIGAQF 192
Query: 190 SSVQESN 196
+
Sbjct: 193 MLPISPD 199
>gi|153009265|ref|YP_001370480.1| type IV pilus assembly PilZ [Ochrobactrum anthropi ATCC 49188]
gi|151561153|gb|ABS14651.1| type IV pilus assembly PilZ [Ochrobactrum anthropi ATCC 49188]
Length = 201
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 109/189 (57%), Gaps = 4/189 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+ Q F V VDL GR++L + +E+ CI++ +SP G ++ + GER I +++ VG
Sbjct: 13 VRQENFNAVNVDLNGRYMLENRSEFPCIIKRMSP-GTALMSGIATPRNGERIIAYIDHVG 71
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
RIEG + N ++ G+ + + TSE ++ KL+ +L WLANK +L L + R + R + R +
Sbjct: 72 RIEG-IANEVTSEGFHILLSTSEQKKDKLSAQLTWLANKHELALPEDRRHERVVPR--KT 128
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
+ D + C++ D+S SG ++ + + + S V+ I G VVR F GG AIEF+
Sbjct: 129 QQNITFADGAQRLCRIADLSLSGAAIESEFKPAIKSGVMLGPIRGTVVRHFQGGFAIEFA 188
Query: 191 SVQESNIAF 199
++Q S
Sbjct: 189 TIQTSTTLD 197
>gi|227821814|ref|YP_002825784.1| hypothetical protein NGR_c12500 [Sinorhizobium fredii NGR234]
gi|227340813|gb|ACP25031.1| hypothetical protein NGR_c12500 [Sinorhizobium fredii NGR234]
Length = 203
Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 105/185 (56%), Gaps = 5/185 (2%)
Query: 15 AFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEG 74
AFQRV V+L GR +L + EY C ++SPG + GER I +++ VGR+EG
Sbjct: 19 AFQRVSVNLSGRLMLANRDEYECTAVDMSPGDVLF-STAARPRAGERIIAYIDHVGRLEG 77
Query: 75 KVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQL 134
V + + +++ ++ +R KLA +L W+ANK +L L + R + R R + +L
Sbjct: 78 TVSRLAEDA-FVIQLNATDRKREKLAAQLTWIANKHELGLPEDRRHDRLAPR--KTVTEL 134
Query: 135 VLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFND-ILGRVVRIFPGGIAIEFSSVQ 193
++ K+ C++ID+S SG +V +D++ + + V + + GR+VR F G+AIEFS +Q
Sbjct: 135 TVDTGEKYICRIIDLSLSGAAVDIDVRPAIGTAVRLGNGMKGRIVRHFQEGVAIEFSGIQ 194
Query: 194 ESNIA 198
Sbjct: 195 AREAL 199
>gi|239832143|ref|ZP_04680472.1| type IV pilus assembly PilZ [Ochrobactrum intermedium LMG 3301]
gi|239824410|gb|EEQ95978.1| type IV pilus assembly PilZ [Ochrobactrum intermedium LMG 3301]
Length = 202
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 62/189 (32%), Positives = 107/189 (56%), Gaps = 4/189 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+ Q F V VDL GR++L + +E+ C+++ +SP G ++ + GER I +++ VG
Sbjct: 14 VRQENFNAVNVDLNGRYMLENRSEFPCVIKRMSP-GTALMSGIATPRNGERIIAYIDHVG 72
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
RIEG + + ++ G+ + + TSE ++ KL+ +L WLANK +L L + R + R +
Sbjct: 73 RIEG-IAHEVTSEGFHILLATSEQKKDKLSAQLTWLANKHELALPEDRRHERVVPHKNR- 130
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
+ D T+ C++ D+S SG ++ + + + S V+ I G VVR F G AIEF+
Sbjct: 131 -QNITFADGTQRLCRIADLSLSGAAIESEFKPAIKSSVMLGPIRGTVVRHFQDGFAIEFA 189
Query: 191 SVQESNIAF 199
++Q S
Sbjct: 190 TIQTSATLD 198
>gi|218530487|ref|YP_002421303.1| type IV pilus assembly PilZ [Methylobacterium chloromethanicum CM4]
gi|218522790|gb|ACK83375.1| type IV pilus assembly PilZ [Methylobacterium chloromethanicum CM4]
Length = 207
Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 10 FIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKV 69
+QR QRV+ L GR++L D EY C ++SPGG+ + C V + + ER ++++E++
Sbjct: 17 AAEQRRHQRVRATLLGRYMLADRREYPCQTVDMSPGGVRLTCAV-IGALNERVVLYLEQI 75
Query: 70 GRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDRE 129
GR+EG +V RG+A+RI + +R K+A +L+WLAN++ L L + R R +
Sbjct: 76 GRLEGVIVRH-PPRGFAMRINATPRKRDKIASQLMWLANRESLGLPEGRTNERLVPNQPG 134
Query: 130 VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEF 189
V L L + ++IDIS SGV+++ + + ++ GRVVR F GGI +F
Sbjct: 135 V--TLRLESGRFIAARIIDISMSGVALATASSPPIGAHIMVGSTPGRVVRYFEGGIGAQF 192
Query: 190 SSVQESN 196
+
Sbjct: 193 MLPISPD 199
>gi|163851681|ref|YP_001639724.1| type IV pilus assembly PilZ [Methylobacterium extorquens PA1]
gi|163663286|gb|ABY30653.1| type IV pilus assembly PilZ [Methylobacterium extorquens PA1]
Length = 207
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 10 FIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKV 69
+QR QRV+ L GR++L D EY C ++SPGG+ + C V + + ER ++++E++
Sbjct: 17 AAEQRRHQRVRATLLGRYMLADRREYPCQTVDMSPGGVRLTCAV-IGALNERVVLYLEQI 75
Query: 70 GRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDRE 129
GR+EG +V RG+A+RI + +R K+A +L+WLAN++ L L + R R +
Sbjct: 76 GRLEGVIVRH-PPRGFAMRINATPRKRDKIASQLMWLANRESLGLPEGRTNERLVPNQPG 134
Query: 130 VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEF 189
V L L + ++IDIS SGV+++ + + +L GRVVR F GGI +F
Sbjct: 135 V--TLRLESGRFIAARIIDISMSGVALATASSPPIGAHILVGSTPGRVVRYFEGGIGAQF 192
Query: 190 SSVQESN 196
+
Sbjct: 193 MLPISPD 199
>gi|240138848|ref|YP_002963323.1| hypothetical protein MexAM1_META1p2255 [Methylobacterium extorquens
AM1]
gi|254561451|ref|YP_003068546.1| hypothetical protein METDI3037 [Methylobacterium extorquens DM4]
gi|240008820|gb|ACS40046.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
gi|254268729|emb|CAX24690.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 199
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 10 FIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKV 69
+QR QRV+ L GR++L D EY C ++SPGG+ + C V + + ER ++++E++
Sbjct: 9 AAEQRRHQRVRATLLGRYMLADRREYPCQTVDMSPGGVRLTCAV-IGALNERVVLYLEQI 67
Query: 70 GRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDRE 129
GR+EG +V RG+A+RI + +R K+A +L+WLAN++ L L + R R +
Sbjct: 68 GRLEGVIVRH-PPRGFAMRINATPRKRDKIASQLMWLANRESLGLPEGRTNERLVPNQPG 126
Query: 130 VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEF 189
V L L + ++IDIS SGV+++ + + +L GRVVR F GGI +F
Sbjct: 127 V--TLRLESGRFIAARIIDISMSGVALATASSPPIGAHILVGSTPGRVVRYFEGGIGAQF 184
Query: 190 SSVQESN 196
+
Sbjct: 185 MLPISPD 191
>gi|170741419|ref|YP_001770074.1| type IV pilus assembly PilZ [Methylobacterium sp. 4-46]
gi|168195693|gb|ACA17640.1| type IV pilus assembly PilZ [Methylobacterium sp. 4-46]
Length = 209
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 73/199 (36%), Positives = 114/199 (57%), Gaps = 4/199 (2%)
Query: 5 IHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIV 64
+ Q D+R RV V L GR++L D EY C +ISPGG+ +VC V VGER+++
Sbjct: 14 LLAAQASDRRRHHRVTVSLLGRYMLSDRREYPCQTVDISPGGVRLVCAV-TGEVGERTVI 72
Query: 65 FVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKI 124
++E +GRIEG + + G+AV I + ++R K+A +L WLAN+ L L + R + R +
Sbjct: 73 YLEHLGRIEGTIARVLPD-GFAVAISATAHKREKIASQLTWLANRASLGLPEDRRHERVV 131
Query: 125 TRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGG 184
R V L L+ + ++ID+S SG +++ DL + + S +L RVVR F GG
Sbjct: 132 PRQTAV--TLRLDTGVEVPARLIDVSLSGAALACDLPLAIDSALLVGRTPCRVVRQFRGG 189
Query: 185 IAIEFSSVQESNIAFKSLI 203
IA+EF + ++L+
Sbjct: 190 IAVEFRLPISPDRFDENLV 208
>gi|315122695|ref|YP_004063184.1| hypothetical protein CKC_04735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496097|gb|ADR52696.1| hypothetical protein CKC_04735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 195
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 150/197 (76%), Positives = 173/197 (87%), Gaps = 2/197 (1%)
Query: 1 MYRGIHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGE 60
MYRGIHNLQFIDQRAFQR+KVDLKGRFLLFDGTEY+C+VRE+SPGGLCI CDVP+ L+GE
Sbjct: 1 MYRGIHNLQFIDQRAFQRIKVDLKGRFLLFDGTEYDCVVREVSPGGLCIACDVPIVLIGE 60
Query: 61 RSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAY 120
R IVFVEK+GRIEGKVVNFD +GYAVRI++SE+ RRKLADKL+WLANKDDL LQD R Y
Sbjct: 61 RFIVFVEKIGRIEGKVVNFDIKKGYAVRIISSEDNRRKLADKLVWLANKDDLSLQDHRKY 120
Query: 121 GRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRI 180
RKI ++V+AQL L + T HSC+VIDISESGVSVSVDL I++FSKV FNDILGRVVR
Sbjct: 121 SRKI--SQDVEAQLTLENKTVHSCQVIDISESGVSVSVDLHIKIFSKVFFNDILGRVVRN 178
Query: 181 FPGGIAIEFSSVQESNI 197
FPGG+AIEF+++Q
Sbjct: 179 FPGGVAIEFATIQNMEE 195
>gi|90417800|ref|ZP_01225712.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337472|gb|EAS51123.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 216
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 105/185 (56%), Gaps = 4/185 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
++ +F RV++DL GRF+ D TE+ C +SPG + + V + + ER IV+++ +G
Sbjct: 30 AERSSFMRVRIDLLGRFMREDRTEFPCRAENMSPGDVSVTASV-VPVENERIIVYIDHIG 88
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
R+EG V G+ + ++ +R KLA +L W AN+ +L L + R + R + V
Sbjct: 89 RLEGAVSRVFEG-GFDLAFQSTPRKREKLAAQLTWFANRHELSLPEDRRHERNAPENPFV 147
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
D +VL+D ++ ++ID+S SG +V+ ++ + S++ GR+VR G A+EFS
Sbjct: 148 D--MVLDDGRRYPAQIIDLSLSGAAVTSSIRPAVGSRITLGTTTGRIVRHIEDGFAVEFS 205
Query: 191 SVQES 195
+ +
Sbjct: 206 AERAR 210
Score = 37.9 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 14/98 (14%)
Query: 120 YGRKITRDREVDAQLVL--------NDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF- 170
R +R ++ + D T+ C+ ++S VSV+ + +++
Sbjct: 24 APRSEPAERSSFMRVRIDLLGRFMREDRTEFPCRAENMSPGDVSVTASVVPVENERIIVY 83
Query: 171 ----NDILGRVVRIFPGGIAIEF-SSVQESNIAFKSLI 203
+ G V R+F GG + F S+ ++ L
Sbjct: 84 IDHIGRLEGAVSRVFEGGFDLAFQSTPRKREKLAAQLT 121
>gi|163760300|ref|ZP_02167383.1| hypothetical protein HPDFL43_08559 [Hoeflea phototrophica DFL-43]
gi|162282699|gb|EDQ32987.1| hypothetical protein HPDFL43_08559 [Hoeflea phototrophica DFL-43]
Length = 171
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 52/169 (30%), Positives = 98/169 (57%), Gaps = 4/169 (2%)
Query: 28 LLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAV 87
+ D +E++C+V +SP ++ VGER + +++ +GRIEG V + +
Sbjct: 1 MRADHSEHDCVVDTMSPFD-AVISSNAQPAVGERIVAYLDYLGRIEGAVTEAGMRT-FTM 58
Query: 88 RIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVI 147
+ ++ +R KL+ +L WLANK +L L + R + R + +++ L D ++ C++I
Sbjct: 59 SLNATDRKRDKLSAQLTWLANKHELGLPEDRNHERVAPSNPS--SEIQLEDGRRYPCRII 116
Query: 148 DISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSVQESN 196
D+S SG ++ +D++ + V+ ++ GRVVR F GIA+EF++VQ +
Sbjct: 117 DLSVSGAAIEIDVRPAFGTMVILGNMRGRVVRHFQEGIAMEFTTVQPED 165
>gi|15889059|ref|NP_354740.1| hypothetical protein Atu8163 [Agrobacterium tumefaciens str. C58]
gi|15156856|gb|AAK87525.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 205
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 98/181 (54%), Gaps = 5/181 (2%)
Query: 19 VKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVN 78
V+V GR +L D EY+C E++ C M G+R I +++ +GRIEG V
Sbjct: 25 VRVSFTGRLMLPDHEEYDCTATEMTAERAQFTCSG-MARNGDRVIAYLQHIGRIEGTVT- 82
Query: 79 FDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLND 138
+ G+ + I E +R KLA +L W+A + L L + R + R R+ AQLVL D
Sbjct: 83 ALTPAGFLIAINAPERKREKLAAQLAWIAKRQLLGLPEDRRHDRLTPRN--AKAQLVLED 140
Query: 139 NTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN-DILGRVVRIFPGGIAIEFSSVQESNI 197
+C++ID+S SG ++ ++ + + S+V ++ G++VR F G+A+EF VQ +
Sbjct: 141 GVLVACRLIDLSLSGAAIEIENRPPLGSRVQLGKNMSGKIVRHFMEGVAVEFDRVQSPDA 200
Query: 198 A 198
Sbjct: 201 L 201
>gi|218681768|ref|ZP_03529535.1| type IV pilus assembly PilZ [Rhizobium etli CIAT 894]
Length = 163
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 4/163 (2%)
Query: 36 NCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENE 95
C+V ++SPG + + C ER + +++ +GR+EG V RG+A+ I +E +
Sbjct: 1 ECMVIDMSPGDMYVTCSG-RPRANERVVAYIDHLGRVEGYV-QTLDGRGFAMSINATERK 58
Query: 96 RRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVS 155
R KLA +L WLANK +L L + R + R RD + +L L D T++SC+++D+S SG +
Sbjct: 59 REKLAAQLTWLANKHELGLPEDRRHDRLTPRD--TNTELTLEDGTRYSCRIMDLSLSGAA 116
Query: 156 VSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSVQESNIA 198
V V+++ + + V ++ GRVVR F G+AIEF S+Q
Sbjct: 117 VDVEMRPSIGTAVRLGNMRGRVVRHFVEGVAIEFLSIQSRETL 159
Score = 34.5 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 6 HNLQFIDQRAFQRV-KVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIV 64
H L + R R+ D L DGT Y+C + ++S G + +G
Sbjct: 73 HELGLPEDRRHDRLTPRDTNTELTLEDGTRYSCRIMDLSLSGAAVDV-EMRPSIGTAV-- 129
Query: 65 FVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKL 99
++G + G+VV G A+ S R L
Sbjct: 130 ---RLGNMRGRVVRHFV-EGVAIEF-LSIQSRETL 159
>gi|114704737|ref|ZP_01437645.1| hypothetical protein FP2506_07371 [Fulvimarina pelagi HTCC2506]
gi|114539522|gb|EAU42642.1| hypothetical protein FP2506_07371 [Fulvimarina pelagi HTCC2506]
Length = 195
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 61/185 (32%), Positives = 103/185 (55%), Gaps = 4/185 (2%)
Query: 16 FQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGK 75
+ V VD+ GRF+ D +EY C + E+SPG + ++ V + ER IV+ + VGR+EG+
Sbjct: 12 YSAVSVDILGRFMRSDTSEYPCRIEEMSPGAVQVIAPVA-PDIRERIIVYADHVGRLEGE 70
Query: 76 VVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLV 135
V G+ ++ + SE R KLA KL WL N+ L+L + R + R + D +V
Sbjct: 71 VAELFEG-GFCLKTLASERRREKLAAKLTWLTNRQLLNLPEDRRHERVQPENPFRD--IV 127
Query: 136 LNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSVQES 195
L+D ++ K+ID+S SG ++ ++ + + + + GR++R G A+EFSSV
Sbjct: 128 LDDGRRYKVKIIDLSLSGAALQSKVRPVIGTSITLGAMPGRIIRYLEDGFAVEFSSVLNE 187
Query: 196 NIAFK 200
+ +
Sbjct: 188 DSLHR 192
>gi|325293138|ref|YP_004279002.1| hypothetical protein AGROH133_06723 [Agrobacterium sp. H13-3]
gi|325060991|gb|ADY64682.1| hypothetical protein AGROH133_06723 [Agrobacterium sp. H13-3]
Length = 205
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 5/183 (2%)
Query: 17 QRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKV 76
V+V GR +L D EY+C E++ C + G+R I +++ +GRIEG V
Sbjct: 23 DPVRVSFTGRLMLPDHQEYDCTATEMTAERALFACSG-IARNGDRVISYLQHIGRIEGTV 81
Query: 77 VNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVL 136
+ G+ + I E +R KLA +L W+A + L L + R + R R+ A L+L
Sbjct: 82 TALTA-SGFVIAINAPERKREKLAAQLAWIAKRQLLGLPEDRRHDRLTPRN--TRAHLML 138
Query: 137 NDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN-DILGRVVRIFPGGIAIEFSSVQES 195
D +C++ID+S SG ++ ++ + + ++V ++ G++VR F G+A+EF VQ
Sbjct: 139 EDGVLLACRLIDLSLSGAAIEIENRPPLGTRVQLGKNMSGKIVRHFMEGVAVEFDRVQSP 198
Query: 196 NIA 198
+
Sbjct: 199 DAL 201
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 8 LQFIDQRAFQRV-KVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFV 66
L + R R+ + + +L DG C + ++S G I + +G R
Sbjct: 116 LGLPEDRRHDRLTPRNTRAHLMLEDGVLLACRLIDLSLSGAAIEIENRPP-LGTRV---- 170
Query: 67 EKVGR-IEGKVVNFDSNRGYAVRIV 90
++G+ + GK+V G AV
Sbjct: 171 -QLGKNMSGKIVRHFM-EGVAVEFD 193
>gi|323138251|ref|ZP_08073323.1| type IV pilus assembly PilZ [Methylocystis sp. ATCC 49242]
gi|322396503|gb|EFX99032.1| type IV pilus assembly PilZ [Methylocystis sp. ATCC 49242]
Length = 204
Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 4/185 (2%)
Query: 8 LQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVE 67
L + R FQRV V + GR++L EY C E+SPG + + V VGE+ +V+++
Sbjct: 12 LDANENRRFQRVPVKMFGRYMLESRREYPCQTVEMSPGDMTLFAPV-KAEVGEKVVVYLD 70
Query: 68 KVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRD 127
++GR G V ++ G+A+ + +R KLAD+L W AN+ +L + R + R +
Sbjct: 71 EIGRFAGVAVRV-TDTGFAMAMNLPPMKRDKLADQLTWFANRHAFNLPEDRRHERIVPLM 129
Query: 128 REVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAI 187
+ L + D + K+ DIS SGV V D + + +++L VVR F GI
Sbjct: 130 QRTL--LRMPDGQELMAKIRDISLSGVGVETDARPPLGARILVGSTPALVVRHFDSGIGG 187
Query: 188 EFSSV 192
EF
Sbjct: 188 EFERP 192
>gi|327188331|gb|EGE55549.1| hypothetical protein RHECNPAF_910024 [Rhizobium etli CNPAF512]
Length = 161
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/160 (35%), Positives = 95/160 (59%), Gaps = 4/160 (2%)
Query: 39 VREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRK 98
V ++SPG + + C ER + +++ +GR+EG V RG+ + I +E +R K
Sbjct: 2 VIDMSPGDMYVTCPG-RPRANERVVAYIDHLGRVEGYV-QTLDGRGFTMSINATERKREK 59
Query: 99 LADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSV 158
LA +L WLANK +L L + R + R RD + +L L+D T+++C+++D+S SG ++ V
Sbjct: 60 LAAQLTWLANKHELGLPEDRRHDRLTPRDIKT--ELTLDDGTRYACRIMDLSLSGAAIDV 117
Query: 159 DLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSVQESNIA 198
+++ + + V ++ GRVVR F G+AIEF S+Q
Sbjct: 118 EMRPSIGTAVRLGNMRGRVVRHFVEGVAIEFLSIQSRETL 157
>gi|86357823|ref|YP_469715.1| hypothetical protein RHE_CH02207 [Rhizobium etli CFN 42]
gi|86281925|gb|ABC90988.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 161
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/160 (35%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Query: 39 VREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRK 98
V ++SPG + + C ER + +++ +GR+EG V +RG+ + I +E +R K
Sbjct: 2 VIDMSPGDMYVTCSG-RPRANERVVAYIDHLGRVEGYV-QTLDSRGFTMSINATERKREK 59
Query: 99 LADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSV 158
LA +L WLANK +L L + R + R RD +L L D T+++C+++D+S SG ++ V
Sbjct: 60 LAAQLTWLANKHELGLPEDRRHDRLTPRD--TKTELTLEDGTRYTCRIMDLSLSGAAIDV 117
Query: 159 DLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSVQESNIA 198
+++ + + V ++ GRVVR F G+AIEF S+Q
Sbjct: 118 EMRPSIGTAVRLGNMRGRVVRHFVEGVAIEFLSIQSRETL 157
>gi|154253084|ref|YP_001413908.1| type IV pilus assembly PilZ [Parvibaculum lavamentivorans DS-1]
gi|154157034|gb|ABS64251.1| type IV pilus assembly PilZ [Parvibaculum lavamentivorans DS-1]
Length = 205
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 4/192 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
++R + RV V+ GRFL DG+E+ C +R+IS GG+ I VP+ +G + IV+++ GR
Sbjct: 13 ERRRYPRVAVETPGRFLAPDGSEHQCALRDISIGGIAISSPVPL-QIGAQIIVYIDDFGR 71
Query: 72 IEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKIT--RDRE 129
EGK+V G+A+ S R +L +L LA + + + RA+ R + E
Sbjct: 72 FEGKIVRVFDG-GFAIETAISGPRRERLQQRLEALARGEKIDVSARRAFARYVPGEAGLE 130
Query: 130 VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEF 189
+ L + D + C++ID+S G V++D + + ++V + GR+VR G+ I+F
Sbjct: 131 ESSVLTMTDGSSIPCRIIDMSLGGAQVAIDPRPMIGTQVSIGKMQGRIVRHTEEGVGIQF 190
Query: 190 SSVQESNIAFKS 201
++V E + A
Sbjct: 191 TNVPEHSNALSR 202
>gi|114799843|ref|YP_761349.1| hypothetical protein HNE_2667 [Hyphomonas neptunium ATCC 15444]
gi|114740017|gb|ABI78142.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 203
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 6/185 (3%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
D+R F+R+++ L GRFL+ D ++ +IS G IV + ++ + + ++VGR
Sbjct: 20 DRRGFKRIELKLAGRFLIGDSEDHVLSTADISCDGAFIVSSE-RPGLDQQVVCYFDEVGR 78
Query: 72 IEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVD 131
+ VV S G+AVR TS ++R KLAD+L WL N+D L L++ R R +
Sbjct: 79 VVANVVRV-SPEGFAVRFHTSPHKRDKLADRLTWLLNRDKLGLEEERGEARYQASG---E 134
Query: 132 AQLVLNDNTKHSCKVIDISESGVSVSVDLQ-IEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
A + L++ C V DIS +G + + + +V +++G VVR+ A+ +
Sbjct: 135 ATVNLSNGGHIQCSVTDISLTGAAFETGGKAPFVGERVTVGNLVGEVVRVAGNKFAVRYI 194
Query: 191 SVQES 195
Q+
Sbjct: 195 HGQKP 199
Score = 43.3 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 8 LQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVE 67
L ++R R + + L +G C V +IS G VGER
Sbjct: 118 LGLEEERGEARYQASGEATVNLSNGGHIQCSVTDISLTGAAFETGGKAPFVGERVT---- 173
Query: 68 KVGRIEGKVVNFDSNRGYAVR 88
VG + G+VV + +AVR
Sbjct: 174 -VGNLVGEVVRV-AGNKFAVR 192
>gi|300023305|ref|YP_003755916.1| type IV pilus assembly PilZ [Hyphomicrobium denitrificans ATCC
51888]
gi|299525126|gb|ADJ23595.1| type IV pilus assembly PilZ [Hyphomicrobium denitrificans ATCC
51888]
Length = 208
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 10 FIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKV 69
D R +R+ + L GRF+ D E+NC + IS GG +V VGER I + + +
Sbjct: 20 ARDMRRHRRLPLSLAGRFMRADRNEFNCQLENISVGGAAVVSPHA-PEVGERVIAYFDHL 78
Query: 70 GRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDRE 129
G +EG V + G+A +E++R KLA +++WL N+ D + R + R TR R
Sbjct: 79 GGVEGVVARH-TPDGFAFSFKVTEHKREKLAAQIMWLINRSDFPEEAGRLHERVGTRGRR 137
Query: 130 VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEF 189
L + D +++D+S SG S+ + + S V+ V R GI ++F
Sbjct: 138 T--TLRVED-VIIDVELLDLSASGASLGTPARPPLGSFVVAGKTRAIVRRHHAQGIGVQF 194
Query: 190 SSVQESNIAFKSL 202
++Q S
Sbjct: 195 LTLQSPEALRDSF 207
>gi|146342076|ref|YP_001207124.1| hypothetical protein BRADO5217 [Bradyrhizobium sp. ORS278]
gi|146194882|emb|CAL78907.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 231
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 8 LQFIDQRAFQRVKVDLKGRFLLFDGTE-------YNCIVREISPGGLCIVCDVPMFLVGE 60
+F+ QRA V++ G + L + + + C +SP + V + VG+
Sbjct: 5 ARFLKQRA---VRIQTAGTYTLPNWYDPEGKLRSFACRTTRVSPFRALLDVPV-VGKVGD 60
Query: 61 RSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKD-DLHLQDCRA 119
R + G+ EG++ + + G+ + + + ER KLA+KL+WL K D ++D R
Sbjct: 61 RLTSYFRDFGKFEGEISDTV-HGGFLLELEMTRAERAKLAEKLVWLEKKQKDPTVRDSRR 119
Query: 120 YGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVR 179
R + + L L D + C VID S SG +VS ++Q E+ + + +GRVVR
Sbjct: 120 EARFVPNSPH--SALTLADGSIIPCFVIDASMSGAAVSAEVQPEIGTPLAVGSCVGRVVR 177
Query: 180 IFPGGIAIEFS-SVQESNIAFKSLI 203
FP G A++F ++ + + +I
Sbjct: 178 HFPDGFAVKFVDTLSATTELERRVI 202
>gi|90423310|ref|YP_531680.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris BisB18]
gi|90105324|gb|ABD87361.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris BisB18]
Length = 235
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTE-------YNCIVREISPGGLCIVCDVPMFLVGER 61
+F+ QRA V + + G + L + + + C +SP + + V + +G+
Sbjct: 5 KFLKQRA---VNLVVGGHYTLANWYDMQGKPRNFACRTSRVSPFRMIMAVPV-VGRIGDH 60
Query: 62 SIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKD-DLHLQDCRAY 120
+ + GR+EG++ + G+ + + RRKLAD+L WL + D ++D R
Sbjct: 61 ITSYFSEFGRLEGRISDTMPG-GFLLELAMPHALRRKLADQLAWLEARQRDPSVRDARRQ 119
Query: 121 GRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRI 180
R I + L D + H C VID+S SGV++S D+Q E+ + + +GRVVR
Sbjct: 120 ARIIPATPH--STLTFADGSIHGCFVIDMSVSGVAISADVQPEVGTPLAVGACVGRVVRH 177
Query: 181 FPGGIAIEFSSVQESNIAFKSLI 203
GG A++F + ++
Sbjct: 178 LNGGFAVKFVEQVNRDDLESRIV 200
>gi|192290093|ref|YP_001990698.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris TIE-1]
gi|192283842|gb|ACF00223.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris TIE-1]
Length = 243
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTE-------YNCIVREISPGGLCIVCDVPMFLVGER 61
+F+ QRA V V + G + L + + + C +SP + + V + VG+
Sbjct: 5 RFLKQRA---VNVTVGGNYSLANWYDQNGKLRQFACRTSRVSPFRMIVDVPV-IGRVGDH 60
Query: 62 SIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKD-DLHLQDCRAY 120
+ + G+++G + + G+ + + + R +L+++L WL K D ++D R
Sbjct: 61 ISSYFSEFGKLDGHISDTLPG-GFLLELAVTRAMRERLSNQLSWLEKKMLDPAIKDAREQ 119
Query: 121 GRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRI 180
R + + L L D + H+C VID+S SG +VS DLQ E+ + + +GRVVR
Sbjct: 120 ARVVPVCPH--SSLTLADGSSHTCFVIDMSISGAAVSADLQPEIGTPLAVGSCVGRVVRH 177
Query: 181 FPGGIAIEFSSVQESNIAFKSL 202
P G A++F+ +Q + +
Sbjct: 178 RPDGFAVKFTELQSRSELEWRI 199
>gi|316935320|ref|YP_004110302.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris DX-1]
gi|315603034|gb|ADU45569.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris DX-1]
Length = 243
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 56/202 (27%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTE-------YNCIVREISPGGLCIVCDVPMFLVGER 61
+F+ QRA V V + G + L + + + C +SP + + V + VG++
Sbjct: 5 RFLKQRA---VNVTVGGNYSLANWYDQNGKLRQFACRTSRVSPFRMIVDVPV-IGRVGDQ 60
Query: 62 SIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKD-DLHLQDCRAY 120
+ + G++EG + + G+ + + + R +L+++L WL K D ++D R
Sbjct: 61 ISSYFSEFGKLEGHISDTLPG-GFLLELAVTRAMRERLSNQLSWLERKMLDPEIKDAREQ 119
Query: 121 GRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRI 180
R + + L+L D + H+C VID+S SGV+VS D+Q E+ + + +GRVVR
Sbjct: 120 ARIVPACPH--STLILADGSTHTCFVIDMSISGVAVSADVQPEIGTPLAVGGCVGRVVRH 177
Query: 181 FPGGIAIEFSSVQESNIAFKSL 202
P G A++F+ +Q N +
Sbjct: 178 RPDGFAVKFTELQNRNELEWRI 199
>gi|39934580|ref|NP_946856.1| hypothetical protein RPA1508 [Rhodopseudomonas palustris CGA009]
gi|39648429|emb|CAE26950.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 243
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDG-------TEYNCIVREISPGGLCIVCDVPMFLVGER 61
+F+ QRA V V + G + L + ++ C +SP + + V + VG+
Sbjct: 5 RFLKQRA---VNVTVGGNYSLANWYNQNGKLRQFACRTSRVSPFRMIVDVPV-IGRVGDH 60
Query: 62 SIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKD-DLHLQDCRAY 120
+ + G+++G + + G+ + + + R +L+++L WL K D ++D R
Sbjct: 61 ISSYFSEFGKLDGHISDTLPG-GFLLELAVTRAMRERLSNQLSWLEKKMLDPAIKDAREQ 119
Query: 121 GRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRI 180
R + + L L D + H+C VID+S SG +VS DLQ E+ + + +GRVVR
Sbjct: 120 ARVVPVCPH--SSLTLADGSSHTCFVIDMSISGAAVSADLQPEIGTPLAVGSCVGRVVRH 177
Query: 181 FPGGIAIEFSSVQESNIAFKSL 202
P G A++F+ +Q + +
Sbjct: 178 RPDGFAVKFTELQNRSELEWRI 199
>gi|115523913|ref|YP_780824.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris BisA53]
gi|115517860|gb|ABJ05844.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris BisA53]
Length = 240
Score = 183 bits (466), Expect = 9e-45, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTE-------YNCIVREISPGGLCIVCDVPMFLVGER 61
+F QRA V + + G + L + + + C R ISP + + V + +G+
Sbjct: 6 KFFKQRA---VNIVVGGHYTLANWYDAHGKPRSFACRTRRISPFRMMVDVPV-VGRLGDS 61
Query: 62 SIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANK-DDLHLQDCRAY 120
+ G++EG++ + + + + + + RR++AD+L WL K D ++D R +
Sbjct: 62 ITSYFGDFGQLEGRITDTVAG-SFLLELDMTGEMRRRMADQLSWLEKKLKDPSVRDERKH 120
Query: 121 GRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRI 180
R + + L D SC VID+S SG ++S D+Q E+ + + +GRVVR
Sbjct: 121 ARIVPATPH--STLTFGDGATRSCFVIDMSVSGAAISADVQPEIGTPLAVGAAVGRVVRH 178
Query: 181 FPGGIAIEFSSVQESNIAFKSLI 203
G A+ F Q + +I
Sbjct: 179 RQDGFAVSFVEPQRLEELERRII 201
>gi|86751123|ref|YP_487619.1| hypothetical protein RPB_4015 [Rhodopseudomonas palustris HaA2]
gi|86574151|gb|ABD08708.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 243
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 10 FIDQRAFQRVKVDLKGRFLLFDGTE-------YNCIVREISPGGLCIVCDVPMFLVGERS 62
F+ QRA V + + G + L + + + C +SP + + V + VG+
Sbjct: 6 FLKQRA---VNIAVGGNYSLANWYDQNGKPRNFACRTSRVSPFRMIVDVPV-VGRVGDAI 61
Query: 63 IVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANK-DDLHLQDCRAYG 121
+ G+++G + + G+ + + + R +L+++L WL K +D + D R
Sbjct: 62 SSYFSDFGKLDGHISDTVPG-GFLLELAVTRAMRERLSNQLNWLEKKLNDPAIVDAREQA 120
Query: 122 RKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIF 181
R + + L++ D + H+C VID+S SGV+VS D+Q E+ + + +GRVVR
Sbjct: 121 RIVPACPH--SSLIMADGSVHTCFVIDMSISGVAVSADVQPEIGTPLAVGGCVGRVVRHR 178
Query: 182 PGGIAIEFSSVQESNIAFKSL 202
G A++FS +Q + +
Sbjct: 179 SDGFAVKFSELQNRSELEWRI 199
>gi|148256955|ref|YP_001241540.1| hypothetical protein BBta_5681 [Bradyrhizobium sp. BTAi1]
gi|146409128|gb|ABQ37634.1| hypothetical protein BBta_5681 [Bradyrhizobium sp. BTAi1]
Length = 229
Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 8 LQFIDQRAFQRVKVDLKGRFLLFDGTE-------YNCIVREISPGGLCIVCDVPMFLVGE 60
+F+ QRA V++ G + L + + + C +SP + V + +G+
Sbjct: 4 ARFLKQRA---VRIQTVGSYTLPNWYDPEGKLRSFACRTTRVSPFRALLDVPV-VGKIGD 59
Query: 61 RSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKD-DLHLQDCRA 119
R + + G+ EG++ + + G+ + + + ER KLA+KL+WL + D ++D R
Sbjct: 60 RLTSYFREFGKFEGQISDTV-HGGFLLELEMTRAERAKLAEKLVWLEKRQRDPTIRDARR 118
Query: 120 YGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVR 179
R + + L+L D + C VID S SGV+VS +LQ E+ + + +GRVVR
Sbjct: 119 DARYVPDSPH--SALMLADGSSIPCLVIDASMSGVAVSSELQPEIGTPLAVGSCVGRVVR 176
Query: 180 IFPGGIAIEFSSVQES-NIAFKSLINH 205
F G A+ F S + ++
Sbjct: 177 HFHDGFAVRFVDPLASMTELERRVVTQ 203
>gi|27379505|ref|NP_771034.1| hypothetical protein bll4394 [Bradyrhizobium japonicum USDA 110]
gi|27352657|dbj|BAC49659.1| bll4394 [Bradyrhizobium japonicum USDA 110]
Length = 221
Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 8 LQFIDQRAFQRVKVDLKGRFLLFDGTE-------YNCIVREISPGGLCIVCDVPMFLVGE 60
+F+ QRA V+V + G + L + + C + +SP + + V + +GE
Sbjct: 17 AEFLRQRA---VEVTVSGSYSLPRWYDCEGKLRTFACRTKRVSPFRMIVDVPV-VGKIGE 72
Query: 61 RSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKD-DLHLQDCRA 119
R + + G + + G+ + + + R +++KL WL K D +Q+ R
Sbjct: 73 RVTSYFQDFGEFQCTISATL-KSGFLMELDMTRARRAWMSEKLTWLEKKQRDASVQELRN 131
Query: 120 YGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVR 179
R + + L L D + H C +ID+S +GV++S + + + + +GRV+R
Sbjct: 132 DARFVPQVSHTF--LTLADGSTHPCFIIDVSTAGVAISCEYDPPIGTPLAIGACVGRVIR 189
Query: 180 IFPGGIAIEFSSVQESNIAFKSL 202
F G A++F+ Q+ + + +
Sbjct: 190 KFDNGFAVKFAEKQQWDDVVRLI 212
>gi|323136579|ref|ZP_08071660.1| type IV pilus assembly PilZ [Methylocystis sp. ATCC 49242]
gi|322397896|gb|EFY00417.1| type IV pilus assembly PilZ [Methylocystis sp. ATCC 49242]
Length = 201
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 4/194 (2%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEK 68
+R V+VDL+GRF+L G E+ C + +S G + V +GE+ IV++ +
Sbjct: 10 GAARERIHNSVEVDLEGRFMLASGAEHPCRIVAMSTGEMLFSTPV-RPRLGEKVIVYIAE 68
Query: 69 VGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDR 128
+GR EG V G+A+ + +E + RKLA++L+W AN+D L L + R + R + +
Sbjct: 69 LGRFEGGVSRH-EGEGFAIGLKLTEMKHRKLAEQLVWFANRDVLDLPENRRHKRIVPMLQ 127
Query: 129 EVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIE 188
+ L++ + + K+ DIS SGVSV V+ + + +V+ +VVR+ GG E
Sbjct: 128 WTI--VRLSNGKEKTAKINDISLSGVSVEVNARPLVGGRVMVGSKAAKVVRLVDGGFVAE 185
Query: 189 FSSVQESNIAFKSL 202
F + +
Sbjct: 186 FEVPFAEGELDERV 199
>gi|254293022|ref|YP_003059045.1| type IV pilus assembly PilZ [Hirschia baltica ATCC 49814]
gi|254041553|gb|ACT58348.1| type IV pilus assembly PilZ [Hirschia baltica ATCC 49814]
Length = 193
Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 6/187 (3%)
Query: 5 IHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIV 64
+ N+ D+R F+RV + R L DG E+N ++ GG+ + D P +G++ I+
Sbjct: 11 VRNIGAKDRRRFRRVIHETTARCLWKDGHEFNAKTVDLCGGGVSLRTDEPC-NLGDQIII 69
Query: 65 FVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKI 124
+V+++GR+ G + G+AV + + K D+L W+ N+ L L+D R R
Sbjct: 70 YVDQLGRLAGTAAR-KTEEGFAVSVKFVPQKLDKFVDQLTWIVNQRSLGLEDDRLSRR-- 126
Query: 125 TRDREVDAQLVLNDNTKHSCKVIDISESGVSV-SVDLQIEMFSKVLFNDILGRVVRIFPG 183
R C VIDIS GV++ + + E+ S+V GR R
Sbjct: 127 -RTSSGQLIATYESGIVAQCNVIDISLLGVALRTSGPRPEIGSRVQIGRKAGRCARYVEN 185
Query: 184 GIAIEFS 190
G A+EF
Sbjct: 186 GFAVEFL 192
>gi|304391876|ref|ZP_07373818.1| type IV pilus assembly PilZ [Ahrensia sp. R2A130]
gi|303296105|gb|EFL90463.1| type IV pilus assembly PilZ [Ahrensia sp. R2A130]
Length = 209
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 96/179 (53%), Gaps = 4/179 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
D RA +R +++L GR LL +G E C +I + I + +G+ IV+++++GR
Sbjct: 23 DDRAVERFRLELSGRCLLPNGLELPCQTTDIQHNAVSITA-LDSAELGQTIIVYLDELGR 81
Query: 72 IEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVD 131
+ G+V G+ + + +E +R KLA+ + A++D + + G E +
Sbjct: 82 LSGEVTRIFEG-GFVLALELTERKRDKLAEHIESYADRDLID--QVLSDGPSTPNINERN 138
Query: 132 AQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
+LVL D + ++ D+S SG S++ ++ + ++V + GRVV+ +PGG+ +EF
Sbjct: 139 ERLVLTDGRSYPVQIKDLSLSGASMTCEVIPALSAQVEVAGLSGRVVQHYPGGLRVEFD 197
>gi|114569626|ref|YP_756306.1| type IV pilus assembly PilZ [Maricaulis maris MCS10]
gi|114340088|gb|ABI65368.1| type IV pilus assembly PilZ [Maricaulis maris MCS10]
Length = 207
Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 5/189 (2%)
Query: 5 IHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIV 64
I ++R RV + L GRF E+ C + +ISPGG I+ + + R ++
Sbjct: 15 IAARGAQERRRHARVPLQLHGRFWSEANGEHACRLVDISPGGARIIARLNLAAE-TRIVL 73
Query: 65 FVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKI 124
+ +GRIEG+VV S ++R +R KLAD + W NKD L L++ R RK
Sbjct: 74 MITSIGRIEGQVVRQ-SGEEISIRFNAPLRKRDKLADAITWRFNKDRLGLEEDRTAPRKP 132
Query: 125 TRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGG 184
R R A+++L+D V+D+S +G + + + + ++ GRV RI G
Sbjct: 133 GRGR---ARILLSDGVVIQANVVDVSVTGAAFECLERPRVGEGLRVGEMSGRVARILDNG 189
Query: 185 IAIEFSSVQ 193
A+ F +
Sbjct: 190 FAVVFDPPE 198
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 44/116 (37%), Gaps = 18/116 (15%)
Query: 93 ENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISES 152
+ + K+A + Q+ R + R + N +H+C+++DIS
Sbjct: 9 DRRKIKIAAR----------GAQERRRHARVPLQLHGRFWS---EANGEHACRLVDISPG 55
Query: 153 GVSVSVDLQIEMFSKVL-----FNDILGRVVRIFPGGIAIEFSSVQESNIAFKSLI 203
G + L + ++++ I G+VVR I+I F++ I
Sbjct: 56 GARIIARLNLAAETRIVLMITSIGRIEGQVVRQSGEEISIRFNAPLRKRDKLADAI 111
>gi|83945654|ref|ZP_00958000.1| hypothetical protein OA2633_15190 [Oceanicaulis alexandrii
HTCC2633]
gi|83851020|gb|EAP88879.1| hypothetical protein OA2633_15190 [Oceanicaulis alexandrii
HTCC2633]
Length = 204
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 21 VDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFD 80
+ + GR L E+ C + +ISPGG I C P ER ++ + +GR+EG+V+
Sbjct: 34 LTVPGRGLSPSAGEFTCTLVDISPGGARIACKTP-PEKAERVVLLFDGLGRLEGEVLRAG 92
Query: 81 SNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNT 140
G+ VR+ S+ +R +LAD + W N L L + R RK R R A++ L D
Sbjct: 93 -RSGFIVRLHGSQRKRDRLADAITWRFNMQRLGLDEDRTAPRKPGRGR---AKIRLRDGV 148
Query: 141 KHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSVQESN 196
VID+S SG + + + + V D+ G V R G A+ F + +
Sbjct: 149 VIQADVIDVSISGAAFACLERPRIGEAVRVGDMQGHVARWLDNGFAVAFDPPADRS 204
>gi|323135566|ref|ZP_08070649.1| type IV pilus assembly PilZ [Methylocystis sp. ATCC 49242]
gi|322398657|gb|EFY01176.1| type IV pilus assembly PilZ [Methylocystis sp. ATCC 49242]
Length = 173
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 4/174 (2%)
Query: 28 LLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAV 87
+L EY C EISPG + V + GE+ ++++ +GR G G+ +
Sbjct: 1 MLKSSEEYPCHTFEISPGEASLFAPV-KAMPGEKVVLYLRDLGRFAGLATRATE-IGFEM 58
Query: 88 RIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVI 147
+ S +R +LAD+L W AN+ L + + R + R + L L +H ++
Sbjct: 59 SLQLSPKKRERLADQLTWYANRSALAVDERRRHERIVP--LMELTVLRLARGDEHIVRIR 116
Query: 148 DISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSVQESNIAFKS 201
+S SGV++ +L + +V+ + VVR F G+A EF + ++
Sbjct: 117 SLSLSGVALETELTPLLGEQVVIGNTPATVVRFFDDGLACEFVTHFRPGEIDET 170
Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 2 YRGIHNLQFIDQRAFQR-VKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGE 60
Y L ++R +R V + L G E+ +R +S G+ + ++ L+GE
Sbjct: 77 YANRSALAVDERRRHERIVPLMELTVLRLARGDEHIVRIRSLSLSGVALETEL-TPLLGE 135
Query: 61 RSIVFVEKVGRIEGKVVNFDSNR 83
+ + +G VV F +
Sbjct: 136 QVV-----IGNTPATVVRFFDDG 153
>gi|170742548|ref|YP_001771203.1| type IV pilus assembly PilZ [Methylobacterium sp. 4-46]
gi|168196822|gb|ACA18769.1| type IV pilus assembly PilZ [Methylobacterium sp. 4-46]
Length = 201
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
+ V + + GR+LL +G E+ C R +SP ++ VP L+G+ ++++ +G
Sbjct: 14 RRAGPAPVLLRIAGRYLLPNGDEHACETRSLSPAEADLLAAVP-GLLGDPVTIYLDTIGA 72
Query: 72 IEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVD 131
I G V+ + G+ V I S R ++A +L WLA + + + D R+ R + + V
Sbjct: 73 ITG-VIRSLTPTGFVVAIEVSPERRARIAARLDWLAARANGRI-DQRSDARIVPVTKAV- 129
Query: 132 AQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSS 191
++ L D +ID+S SG +V++ + + + V VVR GGIA+ F
Sbjct: 130 -EVKLPDGALLPGTLIDLSMSGAAVAMAARPAVGATVTVGKRFATVVRHLDGGIAVAFKL 188
Query: 192 VQESNIAFKSLI 203
++
Sbjct: 189 PFRPETFNDQVV 200
>gi|304319827|ref|YP_003853470.1| hypothetical protein PB2503_01247 [Parvularcula bermudensis
HTCC2503]
gi|303298730|gb|ADM08329.1| hypothetical protein PB2503_01247 [Parvularcula bermudensis
HTCC2503]
Length = 194
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 9/191 (4%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
D+R+ +R+ + RFLL + E +V +S GL + +G IV+V+ +GR
Sbjct: 8 DRRSHRRLPLRSAARFLLPEYGESQALVTNVSLSGLALKSPS-RPRLGVPLIVYVDALGR 66
Query: 72 IEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVD 131
+E +VV S+ G+A+ ++ + R++A K++ A L R G
Sbjct: 67 LEAEVVRHLSD-GFALVFKFTKEKTRRIARKILAFA------LNQRRGSGLASPTLARAT 119
Query: 132 AQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF-NDILGRVVRIFPGGIAIEFS 190
+ + D + +CK+ D S G V + + + + V+ + VVR G A+EFS
Sbjct: 120 SPIRYEDGREEACKLRDFSILGAIVESERRPFLGATVIVHGRLEATVVRHLNDGYAVEFS 179
Query: 191 SVQESNIAFKS 201
+S F
Sbjct: 180 QYWQSIPKFAQ 190
>gi|218528286|ref|YP_002419102.1| type IV pilus assembly PilZ [Methylobacterium chloromethanicum CM4]
gi|218520589|gb|ACK81174.1| type IV pilus assembly PilZ [Methylobacterium chloromethanicum CM4]
Length = 185
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 4/184 (2%)
Query: 19 VKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVN 78
+ V L GR LL G E +C+ R + +V VG R I V+ +G IE V
Sbjct: 4 IPVALAGRILLPCGAERDCLCRLSQADEVYVVIGDAGAAVGSRVICHVDGLGVIEASVTT 63
Query: 79 FDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLND 138
S + + S R +LA +L W + D +D R R I D V ++ L+D
Sbjct: 64 V-SRGSLRLSVEGSPAHRARLATRLAWHRARLD-GREDQRGAMRVIPLDPSV--EVTLSD 119
Query: 139 NTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSVQESNIA 198
+++D+S +G ++ + L+ + + + RVVR G+A+ F
Sbjct: 120 GMAVEARIVDLSATGAALEMVLRPPLDAALTLGRRRARVVRHTDTGVAVRFVLPLRPEDV 179
Query: 199 FKSL 202
+
Sbjct: 180 SADI 183
>gi|296444790|ref|ZP_06886753.1| type IV pilus assembly PilZ [Methylosinus trichosporium OB3b]
gi|296257738|gb|EFH04802.1| type IV pilus assembly PilZ [Methylosinus trichosporium OB3b]
Length = 185
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Query: 25 GRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRG 84
GRF D +Y C ++S + + CD VG R ++ +E+ G+ EG V+ + G
Sbjct: 12 GRFTAPDRRDYFCRAIDMSAEVVALRCDYA-PDVGARIVLHLERWGKFEGAVIRVFAG-G 69
Query: 85 YAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSC 144
+ V + ++ R +A +L WL+ + R++ R R R + + C
Sbjct: 70 FTVGLEVADRGRAHVAMQLAWLS-RHAAG-AAFRSHERLTPRRRFITFTVQ---GVTLPC 124
Query: 145 KVIDISESGVSVSVDLQIEMFSKVLFND-ILGRVVRIFPGGIAIEF 189
+V+D+S SG + ++++ + V + V R G A+ F
Sbjct: 125 EVLDLSRSGALLRTEVKVPDGAAVTLGRKTIAEVARQTDQGFAVRF 170
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 128 REVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF-----NDILGRVVRIFP 182
+ D + C+ ID+S V++ D ++ ++++ G V+R+F
Sbjct: 8 PRFKGRFTAPDRRDYFCRAIDMSAEVVALRCDYAPDVGARIVLHLERWGKFEGAVIRVFA 67
Query: 183 GGIAI 187
GG +
Sbjct: 68 GGFTV 72
>gi|240142085|ref|YP_002966595.1| hypothetical protein MexAM1_META2p0402 [Methylobacterium extorquens
AM1]
gi|240012029|gb|ACS43254.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 197
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 5/175 (2%)
Query: 15 AFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEG 74
R ++ + GR LL DGTE +C + V + +R + +E+VG + G
Sbjct: 13 RQSRTELLVGGRVLLADGTERSC-CVRFDSEDVATVFAAADPAMFDRVLFRLEEVGSLSG 71
Query: 75 KVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQL 134
VV + + +R+ S RR++ KL WL ++ R+ R + R R V Q
Sbjct: 72 IVV-ANDRASFEIRLEGSGERRRRVQTKLDWLEA-HAGGREERRSEIRIVPRRRTV--QF 127
Query: 135 VLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEF 189
+ +++D+S SG S+S+ ++ + VL VVR G+A+ F
Sbjct: 128 RRPGEEPFTTRILDVSPSGASLSMPIRPGIGETVLVGRRYAEVVRHSDEGVAVRF 182
>gi|163852450|ref|YP_001640493.1| type IV pilus assembly PilZ [Methylobacterium extorquens PA1]
gi|163664055|gb|ABY31422.1| type IV pilus assembly PilZ [Methylobacterium extorquens PA1]
Length = 196
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 4/185 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
I++ A V L ++ + +++S G+ V E + +G
Sbjct: 7 IERPASNLHTVFLPALCWSRRQPDFYAVTQDLSRTGITFRSASD-PAVNEPLTCSIRYIG 65
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
++E +VV+ N+ + VR++ S ++A ++ LA + + RA+ R ++V
Sbjct: 66 QVEARVVSSGDNQ-FVVRLMASRQRAAEVARTMLALAREQGRSFESARAHPRINPARKDV 124
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
+ L D ++I++S SG ++++D + + + D +VVRIF GI F+
Sbjct: 125 L--VTLEDGRVLPGRLINVSSSGAALAIDHTLSRGASITIGDTAAKVVRIFRDGIGATFA 182
Query: 191 SVQES 195
+
Sbjct: 183 FPLDP 187
>gi|218531206|ref|YP_002422022.1| type IV pilus assembly PilZ [Methylobacterium chloromethanicum CM4]
gi|218523509|gb|ACK84094.1| type IV pilus assembly PilZ [Methylobacterium chloromethanicum CM4]
Length = 196
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 4/185 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
I++ A V L ++ + +++S G+ V E + +G
Sbjct: 7 IERPASNLHTVFLPALCWSRRQPDFYAVTQDLSRTGITFRSASD-PAVNEPLTCSIRYIG 65
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
++E +VV+ N+ + VR++ S ++A ++ LA + + RA+ R ++V
Sbjct: 66 QVEARVVSSGDNQ-FVVRLMASRQRAAEVARTMLALAREQGRTFESARAHPRINPARKDV 124
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
+ L D ++I++S SG ++++D + + + D +VVRIF GI F+
Sbjct: 125 L--VTLEDGRVLPGRLINVSSSGAALAIDHTLSRGASITIGDTAAKVVRIFRDGIGAAFA 182
Query: 191 SVQES 195
+
Sbjct: 183 FPLDP 187
>gi|240139786|ref|YP_002964263.1| hypothetical protein MexAM1_META1p3242 [Methylobacterium extorquens
AM1]
gi|240009760|gb|ACS40986.1| hypothetical protein MexAM1_META1p3242 [Methylobacterium extorquens
AM1]
Length = 191
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 82/185 (44%), Gaps = 4/185 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
I++ A V L ++ + +++S G+ V E + +G
Sbjct: 2 IERPASNLHTVFLPALCWSRRQPDFYAVTQDLSRTGITFRSASD-PAVNEPLTCSIRYIG 60
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
++E +VV+ N+ + VR++ S ++A ++ LA + + RA+ R ++V
Sbjct: 61 QVEARVVSSGDNQ-FVVRLMASRQRAAEVARTMLALAREQGRTFESARAHPRINPARKDV 119
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
+ L D ++I++S SG ++++D + + + D +VVR+F GI F+
Sbjct: 120 L--VTLEDGRVLPGRLINVSSSGAALAIDHTLSRGASITIGDTAAKVVRVFRDGIGAAFA 177
Query: 191 SVQES 195
+
Sbjct: 178 FPLDP 182
>gi|254562200|ref|YP_003069295.1| hypothetical protein METDI3807 [Methylobacterium extorquens DM4]
gi|254269478|emb|CAX25444.1| hypothetical protein METDI3807 [Methylobacterium extorquens DM4]
Length = 191
Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 82/185 (44%), Gaps = 4/185 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
I++ A V L ++ + +++S G+ V E + +G
Sbjct: 2 IERPASNLHTVFLPALCWSRRQPDFYAVTQDLSRTGITFRSASD-PAVNEPLTCSIRYIG 60
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
++E +VV+ N+ + VR++ S ++A ++ LA + + RA+ R ++V
Sbjct: 61 QVEARVVSSGDNQ-FVVRLMASRQRAAEVARTMLALAREQGRTFESARAHPRINPARKDV 119
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
+ L D ++I++S SG ++++D + + + D +VVR+F GI F+
Sbjct: 120 L--VTLEDGRVLPGRLINVSSSGAALAIDHTLSRGASITIGDTAAKVVRVFRDGIGATFA 177
Query: 191 SVQES 195
+
Sbjct: 178 FPLDP 182
>gi|170751465|ref|YP_001757725.1| type IV pilus assembly PilZ [Methylobacterium radiotolerans JCM
2831]
gi|170657987|gb|ACB27042.1| type IV pilus assembly PilZ [Methylobacterium radiotolerans JCM
2831]
Length = 179
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 69/170 (40%), Gaps = 4/170 (2%)
Query: 23 LKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSN 82
L ++ + ++S G+ + GE + +G +E ++ +
Sbjct: 2 LPALCWNQRRRDFYAVTADVSTEGIRFRSSSLL-APGEDLTCSIRHIGTLEARIARV-AG 59
Query: 83 RGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKH 142
+ + V + LA + + LA DL + RA+ R + R + V Q+
Sbjct: 60 QEFIVCVRGGRAILTDLARQFVTLARAQDLQPEPVRAHRRIVPRQKIV--QVTTATGEAF 117
Query: 143 SCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSV 192
V+++S SGV++ VD ++E+ + + V+R F G+ FS
Sbjct: 118 QGHVLNVSASGVALLVDHELEIGAMIRVGRKTATVMRHFTHGVGAAFSEP 167
>gi|188582465|ref|YP_001925910.1| type IV pilus assembly PilZ [Methylobacterium populi BJ001]
gi|179345963|gb|ACB81375.1| type IV pilus assembly PilZ [Methylobacterium populi BJ001]
Length = 191
Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 84/192 (43%), Gaps = 4/192 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
++ A V L ++ + +++SP G+ V E + +G
Sbjct: 2 TERPASDLRTVFLPALCWSRRQADFYAVTQDLSPDGITFRSAF-EPAVDESLTCSIRYIG 60
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
++E +VV+ D N + VR++TS ++A ++ L+ + + RA+ R ++V
Sbjct: 61 QVETRVVSVDDNL-FVVRLMTSRQRAAEVARTMLALSREQGRSFESARAHPRINPARKDV 119
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
+ L D ++I++S SG ++++D + +++ +VVRIF GI F+
Sbjct: 120 L--VTLEDGRVLPGRLINVSASGAALALDHTLASGARITIGATAAQVVRIFRDGIGAAFA 177
Query: 191 SVQESNIAFKSL 202
+ +
Sbjct: 178 FPLDPAQVHAEI 189
>gi|304321680|ref|YP_003855323.1| hypothetical protein PB2503_10649 [Parvularcula bermudensis
HTCC2503]
gi|303300582|gb|ADM10181.1| hypothetical protein PB2503_10649 [Parvularcula bermudensis
HTCC2503]
Length = 217
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 74/191 (38%), Gaps = 5/191 (2%)
Query: 16 FQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGK 75
F+ V +L L+ E+ C VR IS G I G R+++++ R G
Sbjct: 4 FKSVHTNLHATVLIGADEEWECRVRRISAKGFLIQGVQGQPDEGTRAVLYLNANERFVG- 62
Query: 76 VVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLV 135
++ + +A + S+ +R + + + + + R R ++
Sbjct: 63 ILRQAAKY-FA-TLSISDQQRARAIECMDLYEGTAPPRVANRIGDEPVENRVRIEPKEVT 120
Query: 136 --LNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSVQ 193
L + + + ++ D+S SG+ VS+ + S V + RV R G E +
Sbjct: 121 VLLKNGDEVTGQLTDVSRSGLGVSMPAVLSPTSIVTIGGLTLRVKRTHTLGYGFELLNGI 180
Query: 194 ESNIAFKSLIN 204
+I+ ++
Sbjct: 181 ARDISEARAMD 191
>gi|240136930|ref|YP_002961397.1| Type IV pilus assembly PilZ [Methylobacterium extorquens AM1]
gi|240006894|gb|ACS38120.1| Type IV pilus assembly PilZ [Methylobacterium extorquens AM1]
Length = 185
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 4/183 (2%)
Query: 20 KVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNF 79
V L GR LL G E +C+ R + +V VG R I V+ +G IE V
Sbjct: 5 PVALAGRILLPCGAERDCLCRLSRADEVYVVIGDASAAVGSRVICHVDGLGVIEASVTTV 64
Query: 80 DSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDN 139
S + + S +LA +L W + D +D R R I D V ++ L+D
Sbjct: 65 -SRGSLRLSVEGSPAHMARLATRLAWHRARLD-GREDQRGAMRVIPLDPSV--EVTLSDG 120
Query: 140 TKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSVQESNIAF 199
++ D+S +G ++ + L+ + + + RVVR GIA+ F
Sbjct: 121 MAVEARIADLSATGAALEMVLRPPVDAVLTVGRRRARVVRQTDAGIAVRFVLPLRPQDVS 180
Query: 200 KSL 202
+
Sbjct: 181 ADI 183
>gi|220924042|ref|YP_002499344.1| type IV pilus assembly PilZ [Methylobacterium nodulans ORS 2060]
gi|219948649|gb|ACL59041.1| type IV pilus assembly PilZ [Methylobacterium nodulans ORS 2060]
Length = 200
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 5/183 (2%)
Query: 21 VDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFD 80
+ + GR+LL +G E+ C R S ++ VP L G+ +++ +G + G V+
Sbjct: 22 LRISGRYLLPNGHEHACETRTFSLTEAELIAAVP-GLPGDPVTIYLNTIGAVTG-VIRSL 79
Query: 81 SNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNT 140
+ G+ V I R ++A +L WLA + + D R+ R + + V Q+ L D +
Sbjct: 80 TPAGFIVAIEIGPGRRARIAARLAWLAARASGKI-DQRSDVRIVPATKAV--QVKLPDGS 136
Query: 141 KHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSVQESNIAFK 200
+ID+S +G +++V + + + V VVR GGIA+ F +
Sbjct: 137 VLPGSLIDLSMTGAAIAVAARPAVGATVTVGKRFATVVRHLDGGIAVAFRLPFRPETFNE 196
Query: 201 SLI 203
S++
Sbjct: 197 SVV 199
>gi|240142365|ref|YP_002966875.1| hypothetical protein MexAM1_META2p0689 [Methylobacterium extorquens
AM1]
gi|240012309|gb|ACS43534.1| Hypothetical protein MexAM1_META2p0689 [Methylobacterium extorquens
AM1]
Length = 189
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 69/182 (37%), Gaps = 6/182 (3%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+ + A Q + + L + D ++ + ++S G+ + + GE + +
Sbjct: 2 LQKDAVQPLTIVLPAFCRVPDRIDFYAVTGDVSMRGVRLRSAS-LPRRGEVVECRIRGID 60
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
EG+VV + +A +L R + R + R
Sbjct: 61 PFEGRVVQVTQTD---FTVKVGGASPGVIARQLFEAGRSQPKPEPPVRVHPRFVPR--RT 115
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS 190
D ++ +D + +++++S SGV+V+ +E S V L RVVR F GG F
Sbjct: 116 DVEVARSDGQSFAARILNLSASGVAVAAARYVEPDSIVTIGATLARVVRRFEGGFGAAFL 175
Query: 191 SV 192
Sbjct: 176 QP 177
>gi|23004164|ref|ZP_00047641.1| COG0532: Translation initiation factor 2 (IF-2; GTPase)
[Magnetospirillum magnetotacticum MS-1]
Length = 100
Score = 85.7 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 103 LIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQI 162
++ LA++ + L+ R + R +R+V + L D ++I++S SG ++ ++ +
Sbjct: 1 MLALAHEQERPLEAWRLHARINPVNRDVL--VTLEDGRVLPGRLINVSASGAALVIEDTV 58
Query: 163 EMFSKVLFNDILGRVVRIFPGGIAIEFSSV 192
E + ++ RVVR+F GI F +
Sbjct: 59 ERGAHIVIGSTAARVVRVFRDGIGAAFVTP 88
>gi|218663518|ref|ZP_03519448.1| type IV pilus assembly PilZ [Rhizobium etli IE4771]
Length = 58
Score = 73.8 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 145 KVIDISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSVQESNIA 198
+++D+S SG +V V+++ + + V ++ GRVVR F G+AIEF S+Q
Sbjct: 1 RIMDLSLSGAAVDVEMRPSIGTAVRLGNMRGRVVRHFVEGVAIEFLSIQSRETL 54
>gi|254504525|ref|ZP_05116676.1| Type IV pilus assembly protein PilZ [Labrenzia alexandrii DFL-11]
gi|222440596|gb|EEE47275.1| Type IV pilus assembly protein PilZ [Labrenzia alexandrii DFL-11]
Length = 810
Score = 71.1 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 113 HLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF-- 170
++D R R + D + K + ++ID+S +G + ++ + K++
Sbjct: 719 DVEDRRKAAR---KAISEDVTITFGQGKKRTVQLIDVSTTGAQIMDMSELALGEKLVLDF 775
Query: 171 ---NDILGRVVRIFPGGIAIEFSSVQESN 196
+ + G VVR G +EF+ +
Sbjct: 776 LDGSRLQGTVVRHTGAGCGVEFADALPHD 804
>gi|158424973|ref|YP_001526265.1| methyl-accepting chemotaxis sensory transducer [Azorhizobium
caulinodans ORS 571]
gi|158331862|dbj|BAF89347.1| methyl-accepting chemotaxis sensory transducer [Azorhizobium
caulinodans ORS 571]
Length = 581
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
D+R F R V++ GR G + ++S GG + P VGER + + +G
Sbjct: 318 DRRKFDRWPVEISGRLSHA-GGTASVKTLDLSMGGALLAAVTPTPRVGERITLDLPGLGA 376
Query: 72 IEGKVVNFDSNRGYAVRIVTSEN 94
+ G++ +S G + +++
Sbjct: 377 LPGRIA-ANSPLGCHIAFERTDH 398
Score = 35.6 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 12/99 (12%)
Query: 97 RKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSV 156
+++ L+ + + L D R + R + S K +D+S G +
Sbjct: 301 EEMSRHLLSVLRQTPLG--DRRKFDRWPVEISGRLSHA----GGTASVKTLDLSMGGALL 354
Query: 157 SVD-LQIEMFSKVL-----FNDILGRVVRIFPGGIAIEF 189
+ + ++ + GR+ P G I F
Sbjct: 355 AAVTPTPRVGERITLDLPGLGALPGRIAANSPLGCHIAF 393
>gi|118588233|ref|ZP_01545642.1| methyl-accepting chemotaxis protein [Stappia aggregata IAM 12614]
gi|118438939|gb|EAV45571.1| methyl-accepting chemotaxis protein [Stappia aggregata IAM 12614]
Length = 810
Score = 67.2 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 113 HLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF-- 170
++D R R + D L + K + +++D+S +G + + ++
Sbjct: 719 DVEDRRRATR---KAISEDVTLTCANGHKRTAQLVDVSITGAQILNVTDLPNGERLTLEF 775
Query: 171 --ND-ILGRVVRIFPGGIAIEFSS 191
+ +VVR G +EF+
Sbjct: 776 LDGTVLQAKVVRQTGAGCGVEFAE 799
Score = 37.6 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 2/79 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR 71
D+R R + +G + + ++S G I+ + GER +
Sbjct: 722 DRRRATRKAISEDVTLTCANGHKRTAQLVDVSITGAQILNVTDLPN-GERLTLEFLDGTV 780
Query: 72 IEGKVVNFDSNRGYAVRIV 90
++ KVV + G V
Sbjct: 781 LQAKVVRQ-TGAGCGVEFA 798
>gi|27377559|ref|NP_769088.1| cellulose synthase catalytic subunit [Bradyrhizobium japonicum USDA
110]
gi|27350703|dbj|BAC47713.1| bll2448 [Bradyrhizobium japonicum USDA 110]
Length = 646
Score = 62.6 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 26/81 (32%), Gaps = 8/81 (9%)
Query: 115 QDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFS----KVLF 170
R R + L+ D H ++ DIS +G + S ++
Sbjct: 531 PRKRKAERFDRNEPI----LLRQDGKWHLARLADISITGARLIDPDPPAPGSTIDCRIYG 586
Query: 171 NDILGRVVRIFPGGIAIEFSS 191
I VVR G A+ F
Sbjct: 587 RSIAAIVVRRTTDGFAVRFEE 607
Score = 35.6 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Query: 27 FLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYA 86
L DG + + +IS G ++ P G + GR +V + G+A
Sbjct: 546 LLRQDGKWHLARLADISITGARLIDPDP-PAPGSTIDCRI--YGRSIAAIVVRRTTDGFA 602
Query: 87 VRIV 90
VR
Sbjct: 603 VRFE 606
>gi|209519566|ref|ZP_03268358.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
sp. H160]
gi|209499983|gb|EEA00047.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
sp. H160]
Length = 858
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 14/115 (12%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERS-IV-- 64
+ R R+ + + LL +G C S GGL + + GER +
Sbjct: 702 EARQVRVSHRIPLHVPATLLLPNGRTLACRTINYSIGGLGLALPPGAKVTTGERVGVCLS 761
Query: 65 --FVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKL-----IWLANKDDL 112
+E G +V + +R+ + R++ W+ +
Sbjct: 762 RGHIEHC--FPGVIVRTGARET-GIRLELTPEMERQVIQCTFGRADAWIESAQAP 813
Score = 41.0 bits (95), Expect = 0.096, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Query: 113 HLQDCRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN 171
+ R R V A L+L + +C+ I+ S G+ ++ + +KV
Sbjct: 698 GVAQEARQVRVSHRIPLHVPATLLLPNGRTLACRTINYSIGGLGLA----LPPGAKVTTG 753
Query: 172 DILG 175
+ +G
Sbjct: 754 ERVG 757
>gi|319788003|ref|YP_004147478.1| cellulose synthase catalytic subunit (UDP-forming)
[Pseudoxanthomonas suwonensis 11-1]
gi|317466515|gb|ADV28247.1| cellulose synthase catalytic subunit (UDP-forming)
[Pseudoxanthomonas suwonensis 11-1]
Length = 715
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 14/117 (11%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVG-- 70
R RV + + + DGT C + S GG+ + D P G V + G
Sbjct: 563 RRAHRVPLRMPAVLHMPDGTAVPCHTVDFSTGGMALRPDSPYPMAPGTEVQVELGHRGRS 622
Query: 71 -RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWL----ANKDDLHLQDCRAYGR 122
R+ V +G ++ + E+ + WL + DL + + R
Sbjct: 623 YRLPAVVRQDRDEQGVSIEFQELDLEQER------WLVASTFARADLWMSQWGRHDR 673
Score = 39.9 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 14/86 (16%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSV--SVDLQIEMFSKVLFN-DIL 174
R R R V L + D T C +D S G+++ + ++V
Sbjct: 563 RRAHRVPLRMPAV---LHMPDGTAVPCHTVDFSTGGMALRPDSPYPMAPGTEVQVELGHR 619
Query: 175 GR------VVRI--FPGGIAIEFSSV 192
GR VVR G++IEF +
Sbjct: 620 GRSYRLPAVVRQDRDEQGVSIEFQEL 645
>gi|319648310|ref|ZP_08002527.1| hypothetical protein HMPREF1012_03566 [Bacillus sp. BT1B_CT2]
gi|317389945|gb|EFV70755.1| hypothetical protein HMPREF1012_03566 [Bacillus sp. BT1B_CT2]
Length = 508
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 39/198 (19%)
Query: 8 LQFIDQRAFQ---RVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIV 64
L D+ F+ R V+ F E+ C + ++S G I + + +
Sbjct: 271 LVAFDRPRFRSSERFTVNKPAAFSTVSVDEHKCELIDVSDTGARIR----LPYTADSDMY 326
Query: 65 F------VEKVGRIEGKVVNFDSNR---------------------GYAV-RIVTSENER 96
+ ++ VG++ +V+ + G+ + +R
Sbjct: 327 YHVDGLIIDAVGKVPARVMWTTKDEADIEIGLHFKEMDKELYVKLIGFMFNEENAKKADR 386
Query: 97 RKLADKLIW----LANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISES 152
K AD L L + R Y R+ + ++ H + DIS S
Sbjct: 387 EKRADTLSTVIRFLTKTEKSPDAFKRKYVREAFQGLGTLLFPRDSEKGAHEVMIKDISLS 446
Query: 153 GVSVSVDLQIEMFSKVLF 170
G + +E+ VL
Sbjct: 447 GCQIESGFPLEINEHVLV 464
>gi|52082435|ref|YP_081226.1| glycosyl transferase family protein [Bacillus licheniformis ATCC
14580]
gi|52787831|ref|YP_093660.1| hypothetical protein BLi04154 [Bacillus licheniformis ATCC 14580]
gi|52005646|gb|AAU25588.1| putative Glycosyl transferase, family 2 [Bacillus licheniformis
ATCC 14580]
gi|52350333|gb|AAU42967.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
Length = 752
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 39/198 (19%)
Query: 8 LQFIDQRAFQ---RVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIV 64
L D+ F+ R V+ F E+ C + ++S G I + + +
Sbjct: 515 LVAFDRPRFRSSERFTVNKPAAFSTVSVDEHKCELIDVSDTGARIR----LPYTADSDMY 570
Query: 65 F------VEKVGRIEGKVVNFDSNR---------------------GYAV-RIVTSENER 96
+ ++ VG++ +V+ + G+ + +R
Sbjct: 571 YHVDGLIIDAVGKVPARVMWTTKDEADIEIGLHFKEMDKELYVKLIGFMFNEENAKKADR 630
Query: 97 RKLADKLIW----LANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISES 152
K AD L L + R Y R+ + ++ H + DIS S
Sbjct: 631 EKRADTLSTVIRFLTKTEKSPDAFKRKYVREAFQGLGTLLFPRDSEKGAHEVMIKDISLS 690
Query: 153 GVSVSVDLQIEMFSKVLF 170
G + +E+ VL
Sbjct: 691 GCQIESGFPLEINEHVLV 708
>gi|117924695|ref|YP_865312.1| type IV pilus assembly PilZ [Magnetococcus sp. MC-1]
gi|117608451|gb|ABK43906.1| type IV pilus assembly PilZ [Magnetococcus sp. MC-1]
Length = 417
Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 117 CRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQI-EMFSKV---LFND 172
R + R +D +VL D K S +++DIS +G+ V V + +
Sbjct: 297 DRNHIRVKPKDP--VNVVVLGDGRKLSGELLDISATGMGVVCGGTPIPFGEPVECNMVLE 354
Query: 173 ILGRVVRIFPGGIAIE 188
G+ +R+ +A++
Sbjct: 355 KKGQTLRVSGSIVAVK 370
>gi|296282570|ref|ZP_06860568.1| hypothetical protein CbatJ_03060 [Citromicrobium bathyomarinum
JL354]
Length = 249
Score = 46.4 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 59/198 (29%), Gaps = 37/198 (18%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
D+R +R K L+ G + I+R +S GG + V + G+ + + + +
Sbjct: 27 ADRRKNERQIATFKLACLMVRGEAHPAILRNVSDGGAMLEALVAV-NPGDAVVYWWDGIA 85
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
++E +V NR I + R R
Sbjct: 86 QVEARVAWVKGNRLGLANISGPPQ--------------------------PLAVPRQRAT 119
Query: 131 DAQLVLNDNTKHSCK-----VIDISESGVSVSVDLQIEMFS--KVLFNDIL---GRVVRI 180
+ + +C+ + DIS +G++ I + + +VRI
Sbjct: 120 RIPVRVPVRVWAACRGHWGELTDISLTGLAAKGLQGIAPGTLCTIELGGQALHNATLVRI 179
Query: 181 FPGGIAIEFSSVQESNIA 198
I F
Sbjct: 180 DGEVAGIRFERPLPPAKL 197
>gi|167615538|ref|ZP_02384173.1| glycosyl transferase, group 2 family protein [Burkholderia
thailandensis Bt4]
Length = 679
Score = 46.0 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 9/118 (7%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R R+ + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 523 EAKQVRVTHRIAMRVPATLLLPDGTTLACRTKDYSAGGLGLDAVPLARIALGDTLDVCVS 582
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERRKLADKL----IWLANKDDLHLQDC 117
+ R +V D ++ G +T E ER+ + WL +D D
Sbjct: 583 RGDRPFHFPVRVTRVDATHLGVQFERLTLEQERQLVQCTFGRADAWLGWRDASAEPDD 640
>gi|254502541|ref|ZP_05114692.1| Type IV pilus assembly protein PilZ [Labrenzia alexandrii DFL-11]
gi|222438612|gb|EEE45291.1| Type IV pilus assembly protein PilZ [Labrenzia alexandrii DFL-11]
Length = 584
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 5 IHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVP-MFLVGERSI 63
I D+R R+ + L G + T R+IS GG+ + D + G
Sbjct: 309 IRQTDVGDRRVDDRLPLKLSGTATSGNVTMRI-ETRDISMGGVLFITDADTVPHTGAVLR 367
Query: 64 VFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWL 106
+ + +G E KVVN + ++ R L ++ L
Sbjct: 368 LDLNGIGSTEAKVVNVSDGGCHCAFTSSAGAFRTALEQRITSL 410
>gi|323490164|ref|ZP_08095384.1| hypothetical protein GPDM_12457 [Planococcus donghaensis MPA1U2]
gi|323396212|gb|EGA89038.1| hypothetical protein GPDM_12457 [Planococcus donghaensis MPA1U2]
Length = 116
Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 9/113 (7%)
Query: 13 QRAFQRVKVD--LKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+R F RV + L G+ ++ G+ + ++S GGL + + +GE E +
Sbjct: 5 RREFFRVSFNQALSGKVSVYGGSFLPIQIYDVSAGGLVFSSPLNLP-IGESVSCSFELLE 63
Query: 71 R---IEGKVVNFDSN---RGYAVRIVTSENERRKLADKLIWLANKDDLHLQDC 117
+ +EG +V + V S+ +L +L + + L +
Sbjct: 64 KDFLLEGAIVRKATGVDVVECGVEFSVSQGASSELFKQLNYYQIRQRKSLLED 116
Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
Query: 114 LQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN-- 171
+ + R +++ ++ + ++ + + ++ D+S G+ S L + + V +
Sbjct: 1 MSENRREFFRVSFNQALSGKVSVYGGSFLPIQIYDVSAGGLVFSSPLNLPIGESVSCSFE 60
Query: 172 ------DILGRVVRIFPG----GIAIEFSSVQ-ESNIAFKSL 202
+ G +VR G +EFS Q S+ FK L
Sbjct: 61 LLEKDFLLEGAIVRKATGVDVVECGVEFSVSQGASSELFKQL 102
>gi|94311194|ref|YP_584404.1| glycosyl transferase family protein [Cupriavidus metallidurans
CH34]
gi|93355046|gb|ABF09135.1| cellulose synthase, catalytic subunit [Cupriavidus metallidurans
CH34]
Length = 857
Score = 44.5 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLV 58
+ R R+ + + LL DG C S GGL +V + + LV
Sbjct: 702 EARQVRVSHRIPMRVPATLLLPDGRTIACKTENYSMGGLGMVLPIDVPLV 751
Score = 35.2 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Query: 113 HLQDCRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN 171
+ R R V A L+L D +CK + S G+ + + + + +
Sbjct: 698 GVAREARQVRVSHRIPMRVPATLLLPDGRTIACKTENYSMGGLGMVLPIDVPLVEGAPVG 757
Query: 172 DILGRVVR--IFP 182
L R R FP
Sbjct: 758 VCLSRGSRTYHFP 770
>gi|157363483|ref|YP_001470250.1| type IV pilus assembly PilZ [Thermotoga lettingae TMO]
gi|157314087|gb|ABV33186.1| type IV pilus assembly PilZ [Thermotoga lettingae TMO]
Length = 234
Score = 43.7 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 8 LQFIDQRAFQRVKVDLKGRFLLF-DGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFV 66
++ I +R F R+ + L G + + D EY+ + R+ S GG+ ++C + VG+ V +
Sbjct: 110 VRRIQRRCFVRIPIVLNGTYTVPGDDKEYSFLTRDFSAGGM-LMCTKNILSVGQPISVNM 168
Query: 67 E 67
+
Sbjct: 169 D 169
>gi|325914218|ref|ZP_08176568.1| cellulose synthase catalytic subunit (UDP-forming) [Xanthomonas
vesicatoria ATCC 35937]
gi|325539473|gb|EGD11119.1| cellulose synthase catalytic subunit (UDP-forming) [Xanthomonas
vesicatoria ATCC 35937]
Length = 714
Score = 43.7 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 40/114 (35%), Gaps = 9/114 (7%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGRI 72
R+ RV +D+ L DG C S GG+ I P G + + G +
Sbjct: 562 RSAHRVPLDVPVNLYLPDGAALACRSVNFSTGGMAIKLAQPQPIEPGSAVQIGLSHRG-V 620
Query: 73 EGK---VVNFDSNRGYAVRI-VTSENERRKLADKLIWLANKDDLHLQDCRAYGR 122
E VV D + +++ S + R L + D+ L + R
Sbjct: 621 EQTLPAVVRQDRDGQVSIQFTQMSMEQERWLVA---STFARADIWLSQWGQHDR 671
Score = 37.9 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 11/84 (13%)
Query: 119 AYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSV--SVDLQIEMFSKVLFN---- 171
R R +V L L D +C+ ++ S G+++ + IE S V
Sbjct: 559 RQVRSAHRVPLDVPVNLYLPDGAALACRSVNFSTGGMAIKLAQPQPIEPGSAVQIGLSHR 618
Query: 172 ---DILGRVVRIFPGG-IAIEFSS 191
L VVR G ++I+F+
Sbjct: 619 GVEQTLPAVVRQDRDGQVSIQFTQ 642
>gi|73537356|ref|YP_297723.1| cellulose synthase (UDP-forming) [Ralstonia eutropha JMP134]
gi|72120693|gb|AAZ62879.1| Cellulose synthase (UDP-forming) [Ralstonia eutropha JMP134]
Length = 855
Score = 43.3 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+ R R+ + + LL DG C S GGL ++ V GE+
Sbjct: 700 EARQVRISHRIPMRVPATLLLPDGRTLACRTENYSLGGLGLMLPVETRVDPGEQV 754
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 30/91 (32%), Gaps = 11/91 (12%)
Query: 110 DDLHLQDCRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVS--VDLQIEMFS 166
+ + R R V A L+L D +C+ + S G+ + V+ +++
Sbjct: 693 AAIGVAREARQVRISHRIPMRVPATLLLPDGRTLACRTENYSLGGLGLMLPVETRVDPGE 752
Query: 167 KVLF----NDI----LGRVVRIFPGGIAIEF 189
+V V R + + F
Sbjct: 753 QVGVCLSRGKRSYHFPAVVTRNADRHLGVRF 783
>gi|257142099|ref|ZP_05590361.1| glycosyl transferase, group 2 family protein [Burkholderia
thailandensis E264]
Length = 860
Score = 43.3 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 11/119 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R R+ + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 704 EAKQVRVTHRIAMRVPATLLLPDGTTLACRTKDYSAGGLGLDAVPLARIALGDTLDVCVS 763
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERRKLADKL-----IWLANKDDLHLQDC 117
+ R +V D ++ G + + R+L + WL +D D
Sbjct: 764 RGDRPFHFPVRVTRVDATHLGVQFE-RLTLEQERQLVECTFGRADAWLGWRDASAEPDD 821
>gi|227356454|ref|ZP_03840842.1| cellulose synthase catalytic subunit [Proteus mirabilis ATCC 29906]
gi|227163564|gb|EEI48485.1| cellulose synthase catalytic subunit [Proteus mirabilis ATCC 29906]
Length = 865
Score = 43.3 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLV---GERSI 63
+++ +R F RV++ + LL DG+ Y+C + + S G IV + +
Sbjct: 689 SVEAKQERQFPRVRLRVPAMLLLQDGSLYSCQLNDFSDNGCAIVLPDNFTVPLSCHQEIT 748
Query: 64 VFVEKVGR---IEGKVVNFDSN 82
V +++ R E +++ D+
Sbjct: 749 VILKQNQREYAFEARILRIDNR 770
Score = 34.9 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 119 AYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSVD 159
R+ R R V A L+L D + +SC++ D S++G ++ +
Sbjct: 693 KQERQFPRVRLRVPAMLLLQDGSLYSCQLNDFSDNGCAIVLP 734
>gi|197285946|ref|YP_002151818.1| cellulose synthase catalytic subunit [Proteus mirabilis HI4320]
gi|194683433|emb|CAR44193.1| cellulose synthase catalytic subunit [UDP-forming] [Proteus
mirabilis HI4320]
Length = 865
Score = 43.3 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLV---GERSI 63
+++ +R F RV++ + LL DG+ Y+C + + S G IV + +
Sbjct: 689 SVEAKQERQFPRVRLRVPAMLLLQDGSLYSCQLNDFSDNGCAIVLPDNFTVPLSCHQEIT 748
Query: 64 VFVEKVGR---IEGKVVNFDSN 82
V +++ R E +++ D+
Sbjct: 749 VILKQNQREYAFEARILRIDNR 770
Score = 34.9 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 119 AYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSVD 159
R+ R R V A L+L D + +SC++ D S++G ++ +
Sbjct: 693 KQERQFPRVRLRVPAMLLLQDGSLYSCQLNDFSDNGCAIVLP 734
>gi|83718202|ref|YP_438994.1| group 2 family glycosyl transferase [Burkholderia thailandensis
E264]
gi|83652027|gb|ABC36091.1| glycosyl transferase, group 2 family protein [Burkholderia
thailandensis E264]
Length = 845
Score = 43.3 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 11/119 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R R+ + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 689 EAKQVRVTHRIAMRVPATLLLPDGTTLACRTKDYSAGGLGLDAVPLARIALGDTLDVCVS 748
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERRKLADKL-----IWLANKDDLHLQDC 117
+ R +V D ++ G + + R+L + WL +D D
Sbjct: 749 RGDRPFHFPVRVTRVDATHLGVQFE-RLTLEQERQLVECTFGRADAWLGWRDASAEPDD 806
>gi|114778692|ref|ZP_01453504.1| hypothetical protein SPV1_13492 [Mariprofundus ferrooxydans PV-1]
gi|114551054|gb|EAU53616.1| hypothetical protein SPV1_13492 [Mariprofundus ferrooxydans PV-1]
Length = 155
Score = 42.9 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 14/100 (14%)
Query: 120 YGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSK----VLFND--- 172
+ V A L +V+D+S SGV + D + M ++ +L
Sbjct: 35 HRNYSRSKVSVGAVLSPEGKEPFGVEVVDLSMSGVFLHSDTALPMGTRCQLSILLGHFKH 94
Query: 173 -----ILGRVVRIFPGGIAIEF--SSVQESNIAFKSLINH 205
G VVR GIA+ F V+ + + +++H
Sbjct: 95 ELPIITEGTVVRTDKKGIALRFESVKVESAPKLEELVVDH 134
>gi|300022027|ref|YP_003754638.1| glycosyl transferase family 2 [Hyphomicrobium denitrificans ATCC
51888]
gi|299523848|gb|ADJ22317.1| glycosyl transferase family 2 [Hyphomicrobium denitrificans ATCC
51888]
Length = 656
Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
Query: 115 QDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN--- 171
Q R R R + + D+S SG+ + DL + + + V +
Sbjct: 541 QQRRTGDRFDVRVPVKLTV----NGEQRDYFASDLSVSGMHLIGDLPVPVGTPVKISFAD 596
Query: 172 -DILGRVVRIFPGGIAIEF 189
+ + R G ++F
Sbjct: 597 ISLEAHIRRTTQTGFGLQF 615
>gi|197117398|ref|YP_002137825.1| PilZ domain-containing protein [Geobacter bemidjiensis Bem]
gi|197086758|gb|ACH38029.1| PilZ domain protein [Geobacter bemidjiensis Bem]
Length = 124
Score = 42.6 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 12/84 (14%)
Query: 119 AYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN------- 171
R +R + L+ + +V D+S G+ + D QI M S V
Sbjct: 2 KDRRNFSRVEFRVSALLQAEGVAIKGEVTDVSLHGLYMETDEQIPMGSPVEITIYLSATT 61
Query: 172 -----DILGRVVRIFPGGIAIEFS 190
++ G V R+ PGGI F
Sbjct: 62 EPVVINVKGTVARLVPGGIGCAFD 85
>gi|325526468|gb|EGD04045.1| cellulose synthase (UDP-forming) [Burkholderia sp. TJI49]
Length = 695
Score = 42.6 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 12/108 (11%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVC-DVPMFLVGERSIVFVEKVGR- 71
R R+ + + LL DGT C + S GGL + VG+ V V + R
Sbjct: 544 RVTHRIAMRVPATLLLADGTTAACFTSDYSTGGLGLEAVPGLSLAVGDPLTVCVTRGDRS 603
Query: 72 --IEGKVVNFDS-NRGYAVRIVTSENERR-------KLADKLIWLANK 109
+V + G + +T + ER+ + L W A +
Sbjct: 604 FPFPARVSRVTPTHVGLSFDALTLDQERQLVQCTFGRADAWLDWHAGE 651
Score = 35.2 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 14/107 (13%)
Query: 110 DDLHLQDCRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFS 166
L + R R V A L+L D T +C D S G+ + L + +
Sbjct: 532 AALAVARETKQVRVTHRIAMRVPATLLLADGTTAACFTSDYSTGGLGLEAVPGLSLAVGD 591
Query: 167 KVLFNDILG--------RVVRIFPGGIAIEFSSV---QESNIAFKSL 202
+ G RV R+ P + + F ++ QE + +
Sbjct: 592 PLTVCVTRGDRSFPFPARVSRVTPTHVGLSFDALTLDQERQLVQCTF 638
>gi|114776986|ref|ZP_01452006.1| hypothetical protein SPV1_06479 [Mariprofundus ferrooxydans PV-1]
gi|114552507|gb|EAU54967.1| hypothetical protein SPV1_06479 [Mariprofundus ferrooxydans PV-1]
Length = 143
Score = 42.2 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 15/121 (12%)
Query: 99 LADKLIWLANKDDLHL-QDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVS 157
LA++L + L L R R+ R+ + + H DIS +GV V
Sbjct: 15 LAERLPEEKERQLLSLIASWREDVRRSPRESYNELLHFSSSKGAHYGHARDISGTGVFVE 74
Query: 158 VDLQIEMFSKVLFN----------DILGRVVRIFPGGIAIEFSSVQESNI---AFKSLIN 204
E+ +V + G VVR G+ + F Q + +
Sbjct: 75 TLADFELGEQVSLELTFISAPNPVRLTGEVVRKEEDGVGLRFDQ-QSQDQVAKLDDIISQ 133
Query: 205 H 205
H
Sbjct: 134 H 134
>gi|324113650|gb|EGC07625.1| cellulose synthase catalytic subunit [Escherichia fergusonii B253]
Length = 701
Score = 42.2 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF----LVGERS 62
+++ R R++V G LL +GT + C V + S GGL I + +
Sbjct: 550 SIEQKQVRVSPRIEVAFSGHLLLTNGTRHPCSVIDFSEGGLGITLHSRLGNRNIEKNKPM 609
Query: 63 IVFVEKVGRIEGKV 76
+++ G E +
Sbjct: 610 TLYL-HTGDEECAI 622
Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 102 KLIWLANK-----DDLHLQDCRAYGRKITRDREVDA-QLVLNDNTKHSCKVIDISESGVS 155
L+WL L + + R R + L+L + T+H C VID SE G+
Sbjct: 532 CLMWLVYNTIIIGATLAVSIEQKQVRVSPRIEVAFSGHLLLTNGTRHPCSVIDFSEGGLG 591
Query: 156 VSVDLQI 162
+++ ++
Sbjct: 592 ITLHSRL 598
>gi|167042421|gb|ABZ07147.1| hypothetical protein ALOHA_HF4000ANIW133B20ctg1g9 [uncultured
marine microorganism HF4000_ANIW133B20]
Length = 237
Score = 41.8 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 8/89 (8%)
Query: 6 HNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVF 65
H +Q R R+KVD++GR L D T + IS G I+ D + V + ++
Sbjct: 111 HAIQVKKIRREMRIKVDIEGRLGLQDRTILPVKLTNISATGCQILVDRDIGKVDGQVVLN 170
Query: 66 VEKVGRIEGKVVNFDSNRGYAVRIVTSEN 94
+ + A+ +
Sbjct: 171 F--------NIAQLHDDETSAMTLEAKVR 191
>gi|162451020|ref|YP_001613387.1| hypothetical protein sce2748 [Sorangium cellulosum 'So ce 56']
gi|161161602|emb|CAN92907.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length = 769
Score = 41.8 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Query: 17 QRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGR---IE 73
QRV+V+ G + ++SP G+ + + VG+ I + +G+ +E
Sbjct: 34 QRVRVEALVAVGETSGGGFEAESIDMSPEGMRLRTAY-LPRVGDALICRFDGLGKELVVE 92
Query: 74 GKV---VNFDSNRGYAVRIVTSENERRKLADKL 103
G+V + +R + + +
Sbjct: 93 GEVCWRTEQARGGEFGLRFTGLDAGSEEAVRAM 125
>gi|163794441|ref|ZP_02188412.1| hypothetical protein BAL199_04489 [alpha proteobacterium BAL199]
gi|159180165|gb|EDP64688.1| hypothetical protein BAL199_04489 [alpha proteobacterium BAL199]
Length = 155
Score = 41.8 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 8/99 (8%)
Query: 111 DLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVL- 169
D + R + ++ + D + ++DIS GV + D Q+ +K+
Sbjct: 53 DSPTPESRRHHLRVPEAIGTALMV---DGREVDAVIVDISVGGVGMVTDEQLPAGTKLRV 109
Query: 170 ----FNDILGRVVRIFPGGIAIEFSSVQESNIAFKSLIN 204
I VV + + F + ++ ++L++
Sbjct: 110 AVPPVGWIEAEVVATDDDRLHVRFRTDDATSDQQRALLD 148
Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRI 72
+R RV + G L+ DG E + ++ +IS GG+ +V D + G + V V VG I
Sbjct: 60 RRHHLRVPEAI-GTALMVDGREVDAVIVDISVGGVGMVTDEQLPA-GTKLRVAVPPVGWI 117
Query: 73 EGKVVNFDSNR---GYAVRIVTSENERRKL 99
E +VV D +R + TS+ +R L
Sbjct: 118 EAEVVATDDDRLHVRFRTDDATSDQQRALL 147
>gi|91775201|ref|YP_544957.1| hypothetical protein Mfla_0848 [Methylobacillus flagellatus KT]
gi|91775345|ref|YP_545101.1| hypothetical protein Mfla_0992 [Methylobacillus flagellatus KT]
gi|91709188|gb|ABE49116.1| hypothetical protein Mfla_0848 [Methylobacillus flagellatus KT]
gi|91709332|gb|ABE49260.1| hypothetical protein Mfla_0992 [Methylobacillus flagellatus KT]
Length = 221
Score = 41.8 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 8/89 (8%)
Query: 6 HNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVF 65
H +Q R R+KVD++GR L D T + IS G I+ D + V + ++
Sbjct: 95 HAIQVKKIRREMRIKVDIEGRLGLQDRTILPVKLTNISATGCQILVDRDIGKVDGQVVLN 154
Query: 66 VEKVGRIEGKVVNFDSNRGYAVRIVTSEN 94
+ + A+ +
Sbjct: 155 F--------NIAQLHDDETSAMTLEAKVR 175
>gi|167840227|ref|ZP_02466911.1| glycosyl transferase, group 2 family protein [Burkholderia
thailandensis MSMB43]
Length = 836
Score = 41.8 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 13/120 (10%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R R+ + + LL DGT C ++ S GGL + +G+ V V
Sbjct: 680 EAKQVRVTHRIAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPGARIALGDTLDVCVS 739
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWL-ANKDDLHLQ 115
+ R +V D ++ G +T E ER+ + L W AN+D
Sbjct: 740 RGDRPFHFPVRVTRVDATHLGVQFERLTLEQERQLVQCTFGRADAWLDWRDANRDADDAP 799
>gi|163795195|ref|ZP_02189163.1| hypothetical protein BAL199_05989 [alpha proteobacterium BAL199]
gi|159179593|gb|EDP64122.1| hypothetical protein BAL199_05989 [alpha proteobacterium BAL199]
Length = 121
Score = 41.4 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 10/85 (11%)
Query: 113 HLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN- 171
+ + R Y R D C++ ++S GV ++ + + M + V
Sbjct: 13 RVAERRRYPRYPASAPLEIDV----DGATMECRLDNVSAGGVRLTPAVTVHMGAMVTVRH 68
Query: 172 -----DILGRVVRIFPGGIAIEFSS 191
+ GRVV ++F S
Sbjct: 69 SSSGLALQGRVVGQDDESTRVQFDS 93
>gi|293393852|ref|ZP_06638159.1| cellulose synthase catalytic subunit [Serratia odorifera DSM 4582]
gi|291423679|gb|EFE96901.1| cellulose synthase catalytic subunit [Serratia odorifera DSM 4582]
Length = 867
Score = 41.4 bits (96), Expect = 0.071, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 13/122 (10%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVF 65
++ R RV++ L DG + C +R+ S GG+ + V G+R +
Sbjct: 687 AVEAKQVRQSHRVEIALPAALARADGHLFPCTLRDYSDGGVGVEMRVADQWQEGDRVALL 746
Query: 66 VEKVGR----IEGKVVNFD-SNRGYAVRIVTSENERRKL----ADKLIWLANKDDLHLQD 116
+++ G+ +V + G + +T+ + A W +D +
Sbjct: 747 LKR-GQQEYSFPCQVTRAFGAKVGLRMVDMTTRQHIDFIQCTFARADTWALWQD--GFPE 803
Query: 117 CR 118
+
Sbjct: 804 DK 805
>gi|322420974|ref|YP_004200197.1| type IV pilus assembly PilZ [Geobacter sp. M18]
gi|320127361|gb|ADW14921.1| type IV pilus assembly PilZ [Geobacter sp. M18]
Length = 125
Score = 41.4 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 12/84 (14%)
Query: 119 AYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN------- 171
R +R + L+ + +V D+S G+ + + ++ + + V
Sbjct: 3 KDRRNFSRVDFRVSALLQAEGVAIKGEVSDVSLHGLYMETEEELPVGTPVEVTIYLSATP 62
Query: 172 -----DILGRVVRIFPGGIAIEFS 190
++ G V R+ PGGI F
Sbjct: 63 EPIVINVKGTVARLVPGGIGCSFD 86
>gi|313499297|gb|ADR60663.1| BcsA [Pseudomonas putida BIRD-1]
Length = 244
Score = 41.4 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVC-DVPMFLVGERSIVFVEKVGR- 71
R RV + L +L G Y C + + S GG+ + GE+ + + + R
Sbjct: 71 RRAHRVPMRLPAGLMLASGHAYPCTLVDYSDGGIGLQVQPGLELKPGEQVRLLLNRGQRE 130
Query: 72 --IEGKVVNFD 80
+ V
Sbjct: 131 FAFQACVTRTV 141
>gi|325496948|gb|EGC94807.1| cellulose synthase catalytic subunit [Escherichia fergusonii
ECD227]
Length = 701
Score = 41.4 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF----LVGERS 62
+++ R R++V G LL +GT + C + + S GGL I + +
Sbjct: 550 SIEQKQVRVSPRIEVAFSGHLLLTNGTRHPCSIIDFSEGGLGITLHSSLGNRNIEKNKPM 609
Query: 63 IVFVEKVGRIEGKV 76
+++ G E +
Sbjct: 610 TLYL-HTGDEECAI 622
Score = 35.6 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 102 KLIWLANK-----DDLHLQDCRAYGRKITRDREVDA-QLVLNDNTKHSCKVIDISESGVS 155
L+WL L + + R R + L+L + T+H C +ID SE G+
Sbjct: 532 CLMWLVYNTIIIGATLAVSIEQKQVRVSPRIEVAFSGHLLLTNGTRHPCSIIDFSEGGLG 591
Query: 156 VS 157
++
Sbjct: 592 IT 593
>gi|222056295|ref|YP_002538657.1| type IV pilus assembly PilZ [Geobacter sp. FRC-32]
gi|221565584|gb|ACM21556.1| type IV pilus assembly PilZ [Geobacter sp. FRC-32]
Length = 88
Score = 41.4 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 15/85 (17%)
Query: 116 DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN---- 171
+ R + R D + N+ T +S V D+S G V+ D+ I + V
Sbjct: 2 EKRKFARLA---MHSDTNIKFNN-TMYSGTVRDLSMKGAFVTTDVLIPVNETVEVTIYTS 57
Query: 172 -------DILGRVVRIFPGGIAIEF 189
D+ +V+R GI +EF
Sbjct: 58 STPNMLCDLQAKVIRSTEYGIGLEF 82
>gi|167724301|ref|ZP_02407537.1| glycosyl transferase, group 2 family protein [Burkholderia
pseudomallei DM98]
Length = 644
Score = 41.4 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 488 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 547
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 548 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 607
Query: 117 CRA 119
R
Sbjct: 608 LRG 610
>gi|167850274|ref|ZP_02475782.1| glycosyl transferase, group 2 family protein [Burkholderia
pseudomallei B7210]
Length = 642
Score = 41.0 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 486 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 545
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 546 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 605
Query: 117 CRA 119
R
Sbjct: 606 LRG 608
>gi|167743265|ref|ZP_02416039.1| glycosyl transferase, group 2 family protein [Burkholderia
pseudomallei 14]
Length = 637
Score = 41.0 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 481 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 540
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 541 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 600
Query: 117 CRA 119
R
Sbjct: 601 LRG 603
>gi|304394234|ref|ZP_07376157.1| type IV pilus assembly protein PilZ [Ahrensia sp. R2A130]
gi|303293674|gb|EFL88051.1| type IV pilus assembly protein PilZ [Ahrensia sp. R2A130]
Length = 280
Score = 41.0 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 117 CRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF----ND 172
+ RK R + +++ + + +ID+S SG + +E +++ +
Sbjct: 181 DKMESRKARRYKLSLEAVMVLEGRETIAFIIDLSSSGAKLECIATVEKDTRIKLLVDDLE 240
Query: 173 ILGRVVRIFPGGIAIEFSSV 192
I RVV G I ++F++
Sbjct: 241 IPARVVWSGGGNIGLQFTTP 260
>gi|124515765|gb|EAY57274.1| Cellulose synthase catalytic subunit (UDP-forming) [Leptospirillum
rubarum]
gi|206602270|gb|EDZ38752.1| Cellulose synthase catalytic subunit (UDP- forming) [Leptospirillum
sp. Group II '5-way CG']
Length = 714
Score = 41.0 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 6/110 (5%)
Query: 13 QRAFQ-RVKVDLKGRFLLFDGTEYNCIVREISPGGLCIV-CDVPMFLVGERSIVFVEKVG 70
QR F+ R+ V+ R DG ++S G+ I GE V + +
Sbjct: 559 QRRFRPRINVNYPVRLSAPDGQYVYGETEDMSDDGVRIRLLKSASLRTGEDVRVEIPFLD 618
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDD----LHLQD 116
RI +++R+ + ++++ L + D L L +
Sbjct: 619 RIHEFPAEIVGMDEFSIRLNFHPLTLEEEKNRVLLLYGRADAWVKLGLSE 668
>gi|167583135|ref|ZP_02376009.1| glycosyl transferase, group 2 family protein [Burkholderia
thailandensis TXDOH]
Length = 677
Score = 41.0 bits (95), Expect = 0.095, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 9/118 (7%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R R+ + + L DGT C ++ S GGL + +G+ V V
Sbjct: 521 EAKQVRVTHRIAMRVPATLLFADGTTAACHTKDYSAGGLGLDAVPGARVALGDTLDVCVS 580
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERRKLADKL----IWLANKDDLHLQDC 117
+ R +V D ++ G +T E ER+ + WL +D D
Sbjct: 581 RGDRPFHFPVRVTRVDATHLGVQFERLTLEQERQLVQCTFGRADAWLGWRDASAEPDD 638
>gi|251767715|ref|ZP_02268187.2| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
mallei PRL-20]
gi|243061960|gb|EES44146.1| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
mallei PRL-20]
Length = 698
Score = 41.0 bits (95), Expect = 0.095, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 542 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 601
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 602 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 661
Query: 117 CRA 119
R
Sbjct: 662 LRG 664
>gi|167923405|ref|ZP_02510496.1| glycosyl transferase, group 2 family protein [Burkholderia
pseudomallei BCC215]
Length = 656
Score = 41.0 bits (95), Expect = 0.099, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 500 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 559
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 560 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 619
Query: 117 CRA 119
R
Sbjct: 620 LRG 622
>gi|15606591|ref|NP_213971.1| cellulose synthase catalytic subunit [Aquifex aeolicus VF5]
gi|2983803|gb|AAC07360.1| cellulose synthase catalytic subunit [Aquifex aeolicus VF5]
Length = 759
Score = 41.0 bits (95), Expect = 0.099, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 117 CRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQI 162
R RK R D ++ D+ +VIDIS G++V ++ +
Sbjct: 586 ERRQRRKFHRIPSNDQIIIYRDSETLLGRVIDISLGGLAVKLETKP 631
>gi|319789137|ref|YP_004150770.1| type IV pilus assembly PilZ [Thermovibrio ammonificans HB-1]
gi|317113639|gb|ADU96129.1| type IV pilus assembly PilZ [Thermovibrio ammonificans HB-1]
Length = 209
Score = 41.0 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 22/142 (15%)
Query: 49 IVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRG---------YAVRIVTSENERRKL 99
+ C + + + EG V S G + + S +
Sbjct: 13 VRCPGGR-EITVPILFSFKGEESEEGVVATSFSPPGIVEILKKRQFFLIKENSRRRTVLV 71
Query: 100 ADKLIW------LANKDDLHLQDCRAYGRKI--TRDREVDAQLVLNDNTKHSCKVIDISE 151
K+ W L D+ +++ R Y R + + +L L + + KV+DIS
Sbjct: 72 KGKVKWCKGNSCLFQLDEEVIEEKRFYERFVFCPEELGE-FELHLKNGERIPVKVLDISM 130
Query: 152 SGVSVSVDLQIEMFSKVLFNDI 173
SG+ + V+ KV +
Sbjct: 131 SGIKLLVERY---GEKVSAGET 149
>gi|299135205|ref|ZP_07028396.1| type IV pilus assembly PilZ [Afipia sp. 1NLS2]
gi|298590182|gb|EFI50386.1| type IV pilus assembly PilZ [Afipia sp. 1NLS2]
Length = 89
Score = 41.0 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 118 RAYGRKITRDREVDAQLVLNDN-TKHSCKVIDISESGVSVSVDLQIEMFSKVLFN----- 171
+ RK ++ A L L+ K C ++D+S +G +SV ++ SK+
Sbjct: 5 KRESRKARHQTQLGAWLTLDGGFAKRPCTIVDLSATGARLSVQNGGKLGSKIALALTMDV 64
Query: 172 --DILGRVVRIFPGGIAIEFSSV 192
R+V I +EF V
Sbjct: 65 RKLTPCRLVWQRGNEIGVEFVHV 87
>gi|167907195|ref|ZP_02494400.1| glycosyl transferase, group 2 family protein [Burkholderia
pseudomallei NCTC 13177]
Length = 681
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 525 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 584
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 585 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 644
Query: 117 CRA 119
R
Sbjct: 645 LRG 647
>gi|167828816|ref|ZP_02460287.1| glycosyl transferase, group 2 family protein [Burkholderia
pseudomallei 9]
Length = 658
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 502 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 561
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 562 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 621
Query: 117 CRA 119
R
Sbjct: 622 LRG 624
>gi|67640569|ref|ZP_00439371.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
mallei GB8 horse 4]
gi|238521314|gb|EEP84767.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
mallei GB8 horse 4]
Length = 575
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 419 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 478
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 479 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 538
Query: 117 CRA 119
R
Sbjct: 539 LRG 541
>gi|167820446|ref|ZP_02452126.1| glycosyl transferase, group 2 family protein [Burkholderia
pseudomallei 91]
Length = 663
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 507 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 566
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 567 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 626
Query: 117 CRA 119
R
Sbjct: 627 LRG 629
>gi|167915562|ref|ZP_02502653.1| glycosyl transferase, group 2 family protein [Burkholderia
pseudomallei 112]
Length = 659
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 503 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 562
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 563 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 622
Query: 117 CRA 119
R
Sbjct: 623 LRG 625
>gi|167898876|ref|ZP_02486277.1| glycosyl transferase, group 2 family protein [Burkholderia
pseudomallei 7894]
Length = 671
Score = 41.0 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 515 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 574
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 575 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 634
Query: 117 CRA 119
R
Sbjct: 635 LRG 637
>gi|227328206|ref|ZP_03832230.1| cellulose synthase catalytic subunit [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 899
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 40/105 (38%), Gaps = 13/105 (12%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVF 65
++ R RV++ + L DG + C++R+ S GG+ + VG+ +
Sbjct: 689 AVEAKQVRQAHRVEMSMSAAILRADGHLFPCVLRDYSDGGVGVEARESGILQVGDSVSLL 748
Query: 66 VEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKD 110
+++ + YA + K+ ++ LA +
Sbjct: 749 LKR------------GQQEYAFPFSVTRAFDNKIGLRMTNLAIRQ 781
>gi|26989354|ref|NP_744779.1| cellulose synthase catalytic subunit [Pseudomonas putida KT2440]
gi|24984212|gb|AAN68243.1|AE016458_8 cellulose synthase, putative [Pseudomonas putida KT2440]
Length = 869
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVC-DVPMFLVGERSIVFVEKVGR- 71
R RV++ L +L G Y C + + S GG+ + GE+ + + + R
Sbjct: 696 RRAHRVQMRLPAGLMLASGHAYPCTLVDYSDGGIGLQVQPGLELKPGEQVRLLLNRGQRE 755
Query: 72 --IEGKVVNFD 80
+ V
Sbjct: 756 FAFQACVTRTV 766
>gi|148547357|ref|YP_001267459.1| cellulose synthase catalytic subunit [Pseudomonas putida F1]
gi|148511415|gb|ABQ78275.1| Cellulose synthase (UDP-forming) [Pseudomonas putida F1]
Length = 869
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVC-DVPMFLVGERSIVFVEKVGR- 71
R RV++ L +L G Y C + + S GG+ + GE+ + + + R
Sbjct: 696 RRAHRVQMRLPAGLMLASGHAYPCTLVDYSDGGIGLQVQPGLELKPGEQVRLLLNRGQRE 755
Query: 72 --IEGKVVNFD 80
+ V
Sbjct: 756 FAFQACVTRTV 766
>gi|121998304|ref|YP_001003091.1| type IV pilus assembly PilZ [Halorhodospira halophila SL1]
gi|121589709|gb|ABM62289.1| type IV pilus assembly PilZ [Halorhodospira halophila SL1]
Length = 189
Score = 40.6 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 13/88 (14%)
Query: 115 QDCRAYGRKIT--RDREVDAQLVLNDN-----TKHSCKVIDISESGVSVS--VDLQIEMF 165
R + R R +L TK +C++ +IS+SG ++ + LQ
Sbjct: 100 PAWRGHPRNNPLDRRAAPRHRLTAEAGIEAARTKITCRIHNISKSGALITLHLMLQPSDE 159
Query: 166 SKVLFND----ILGRVVRIFPGGIAIEF 189
+ I G+V R+ G I F
Sbjct: 160 VHLTLRSRDQPINGQVARVSDHGCGILF 187
>gi|253701847|ref|YP_003023036.1| type IV pilus assembly PilZ [Geobacter sp. M21]
gi|251776697|gb|ACT19278.1| type IV pilus assembly PilZ [Geobacter sp. M21]
Length = 124
Score = 40.6 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 12/84 (14%)
Query: 119 AYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN------- 171
R +R + L+ + +V D+S G+ + D I + S V
Sbjct: 2 KDRRNFSRVEFRVSALLQAEGVAIKGEVTDVSLHGLYMETDELIPVGSPVEITIYLSATT 61
Query: 172 -----DILGRVVRIFPGGIAIEFS 190
++ G V R+ PGGI F
Sbjct: 62 EPVVINVKGTVARLVPGGIGCAFD 85
>gi|220936203|ref|YP_002515102.1| hypothetical protein Tgr7_3046 [Thioalkalivibrio sp. HL-EbGR7]
gi|219997513|gb|ACL74115.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 91
Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 17/88 (19%)
Query: 116 DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDL--QIEMFSKV---LF 170
D R + R EV+ +L + + D+S SGV + + + + ++V +
Sbjct: 4 DRRRHPRIP---MEVEVELHVPAEALRVVRTRDLSGSGVLLLMPAEGRPAIGARVQVRVV 60
Query: 171 NDI---------LGRVVRIFPGGIAIEF 189
+ VVR P G+A+ F
Sbjct: 61 GALGDGDAPPLVPATVVRDLPEGVAVAF 88
>gi|320547940|ref|ZP_08042223.1| glycosyltransferase [Streptococcus equinus ATCC 9812]
gi|320447480|gb|EFW88240.1| glycosyltransferase [Streptococcus equinus ATCC 9812]
Length = 747
Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 22/113 (19%)
Query: 111 DLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQ--IEMFSKV 168
+ R R I + V D + +V DISE+G+S S L + ++
Sbjct: 506 AIGRPTYRNSERFIVDEPMVID----ADGESYDVRVCDISETGISFSSPLPLYLPPKKEL 561
Query: 169 LF--------NDILGRVVRIFPGG------IAIEFSSVQESNIAFKSLINHCY 207
G VVR+ ++F+SV++++I + + Y
Sbjct: 562 TLHLQSRNYRALTKGHVVRVVVNDEAKGWRYGVQFTSVEKADI--RQFYQYIY 612
>gi|209884863|ref|YP_002288720.1| type IV pilus assembly PilZ [Oligotropha carboxidovorans OM5]
gi|209873059|gb|ACI92855.1| type IV pilus assembly PilZ [Oligotropha carboxidovorans OM5]
Length = 88
Score = 40.6 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 8/82 (9%)
Query: 118 RAYGRKITRDREVDAQLVLNDN-TKHSCKVIDISESGVSVSVDLQIEMFSKVL------F 170
+ RK ++ L L+ K C ++D+S SG ++V ++ +K+
Sbjct: 5 KREARKPRHKIQLGVWLTLDGGFAKRPCTILDLSTSGARLAVSNSGKLGNKLALALTKDV 64
Query: 171 NDI-LGRVVRIFPGGIAIEFSS 191
+ R+V I +EF
Sbjct: 65 GKLTPCRLVWQRGDEIGVEFVQ 86
>gi|94265934|ref|ZP_01289660.1| hypothetical protein MldDRAFT_3859 [delta proteobacterium MLMS-1]
gi|93453520|gb|EAT03928.1| hypothetical protein MldDRAFT_3859 [delta proteobacterium MLMS-1]
Length = 366
Score = 40.6 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 65/203 (32%), Gaps = 31/203 (15%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVR--EISPGGLCIVC-DVPMFLVGERS--IVF 65
I +R +R++V L T +C ++S G ++ D+ + G+R + F
Sbjct: 107 IQRRREERLEVPEGSSVSLRRTTGNSCHGVPLDLSRCGARMLLRDIAIHRSGDRIGPVSF 166
Query: 66 --VEKVGRIE--------GKV--VNFDSNRGYAVRIVTSEN--ERRKLADKLIWLANKDD 111
+ K+ R E V V RG + + R LA L ++
Sbjct: 167 NLLRKLSRSESISITVPEATVAWVREADGRGTMIGVQFPHEIEGRESLAAWLRMREEEEK 226
Query: 112 LHLQ------------DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVD 159
L + D R R D V +DIS +G ++ +
Sbjct: 227 LLTEQSEKSDVGEITDDRRRQERVTPADHSVLTMAAPGGGRLLRAVAVDISRTGARITGN 286
Query: 160 LQIEMFSKVLFNDILGRVVRIFP 182
+ ++ + + R
Sbjct: 287 FPAGLQRGMVVGPLTFTLNRQLT 309
>gi|288941294|ref|YP_003443534.1| type IV pilus assembly PilZ [Allochromatium vinosum DSM 180]
gi|288896666|gb|ADC62502.1| type IV pilus assembly PilZ [Allochromatium vinosum DSM 180]
Length = 98
Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 22/99 (22%)
Query: 115 QDCRAYGRKITRDREVDAQLVLNDNTKHSCKVI--DISESGVSVSVDLQ---IEMFSKVL 169
+ R + R V+ ++ L+ + + C V D+S GVS+ ++ + ++V
Sbjct: 5 NEKRQHPRLP-----VEVEVELHRSGRSMCLVWTDDLSNGGVSLMMNGHGDWPPIGARVQ 59
Query: 170 FND------------ILGRVVRIFPGGIAIEFSSVQESN 196
+ VVR GIA+ F
Sbjct: 60 IRVSCPLGGDDESPLVDAIVVRHTEAGIAVRFDETPTRE 98
>gi|126739523|ref|ZP_01755216.1| hypothetical protein RSK20926_21440 [Roseobacter sp. SK209-2-6]
gi|126719623|gb|EBA16332.1| hypothetical protein RSK20926_21440 [Roseobacter sp. SK209-2-6]
Length = 303
Score = 40.2 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 117 CRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN----D 172
R R + + + + + ++++S SG + + ++ +V N
Sbjct: 203 QRRTRRY---GCMLPCTVTDAN-SLYPAMIVNVSRSGAKLQIARGLDSGHRVELNFLGER 258
Query: 173 ILGRVVRIFPGGIAIEFSSVQESNIAFKSLIN 204
RVVR + ++F + + + ++L N
Sbjct: 259 APARVVRCSKDHMMLDFDEMMNTELLDRALFN 290
>gi|218548531|ref|YP_002382322.1| cellulose synthase catalytic subunit [Escherichia fergusonii ATCC
35469]
gi|218356072|emb|CAQ88689.1| cellulose synthase catalytic subunit [UDP-forming] [Escherichia
fergusonii ATCC 35469]
Length = 701
Score = 40.2 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF----LVGERS 62
+++ R R++V G LL +GT + C V + S GGL I + +
Sbjct: 550 SIEQKQVRVSPRIEVAFSGHLLLTNGTRHTCSVIDFSEGGLGITLHSRLGNRNIEKNKPM 609
Query: 63 IVFVEKVGRIEGKV 76
+++ G E +
Sbjct: 610 TLYL-HTGDEECAI 622
Score = 35.6 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 102 KLIWLANK-----DDLHLQDCRAYGRKITRDREVDA-QLVLNDNTKHSCKVIDISESGVS 155
L+WL L + + R R + L+L + T+H+C VID SE G+
Sbjct: 532 CLMWLVYNTIIIGATLAVSIEQKQVRVSPRIEVAFSGHLLLTNGTRHTCSVIDFSEGGLG 591
Query: 156 VSVDLQI 162
+++ ++
Sbjct: 592 ITLHSRL 598
>gi|158520869|ref|YP_001528739.1| type IV pilus assembly PilZ [Desulfococcus oleovorans Hxd3]
gi|158509695|gb|ABW66662.1| type IV pilus assembly PilZ [Desulfococcus oleovorans Hxd3]
Length = 356
Score = 40.2 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 56/161 (34%), Gaps = 34/161 (21%)
Query: 60 ERSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTS------ENERRKL-------ADKLIWL 106
E +I + +GR G + + + +V S R K+ A ++ L
Sbjct: 154 EPAINSADSIGRYSG-LSVLIGSVAVLISVVLSCLVLLYARRRIKMEKEIVNTAGQVEAL 212
Query: 107 AN------KDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDL 160
+ K+ ++ R + R R + VL + + + DIS G +
Sbjct: 213 RHTIENIYKNPDDAKEKREHTRVPGLVR---VEFVLAN-QAYLGVIKDISVGGAFIETKK 268
Query: 161 QIEMFSKVLFN----------DILGRVVRIFPGGIAIEFSS 191
+ + ++ N + ++R P GIA+ F
Sbjct: 269 RFSVGQNLVMNYPFQAIQGYIRMNAVIIRTEPDGIAVRFKE 309
>gi|294010700|ref|YP_003544160.1| putative glycosyltransferase [Sphingobium japonicum UT26S]
gi|292674030|dbj|BAI95548.1| putative glycosyltransferase [Sphingobium japonicum UT26S]
Length = 648
Score = 40.2 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRI 72
+RA +R + F D + +IS G+ + + +G+R + + ++G +
Sbjct: 534 RRAEERAPISGTALFNAGDSAT-PVRLLDISSSGVAF-ANEGGWRIGDRGTISIRELGEV 591
Query: 73 EGKVVNFDSN 82
+
Sbjct: 592 PAIIARITDR 601
Score = 36.0 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 121 GRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF-----NDILG 175
R R L ++ +++DIS SGV+ + + + + ++
Sbjct: 534 RRAEERAPISGTALFNAGDSATPVRLLDISSSGVAFANEGGWRIGDRGTISIRELGEVPA 593
Query: 176 RVVRIFPGGIAIEFSSVQESNIAFKSL 202
+ RI + + + +A
Sbjct: 594 IIARITDRVVGAKILLSPQQQVALTHF 620
>gi|294625745|ref|ZP_06704365.1| celullose synthase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292599981|gb|EFF44098.1| celullose synthase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
Length = 731
Score = 40.2 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 9/114 (7%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGRI 72
R+ RV +D+ L DG S GG+ I+ P G + + G +
Sbjct: 579 RSAHRVPLDVPVTLYLPDGGALPSRSVNFSTGGMAIMLAQPQPIEPGLPVQIGLSHRG-V 637
Query: 73 EGK---VVNFDSNRGYAVRI-VTSENERRKLADKLIWLANKDDLHLQDCRAYGR 122
E VV D + +++ S + R L + D+ L + R
Sbjct: 638 EQTLPAVVRQDRDGQVSIQFTQMSMEQERWLVA---STFARADIWLSQWGQHDR 688
>gi|221214987|ref|ZP_03587955.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
multivorans CGD1]
gi|221165214|gb|EED97692.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
multivorans CGD1]
Length = 637
Score = 39.9 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERS---IVFVEKV 69
R R+ + + LL DGT C + S GGL + VG+R + ++
Sbjct: 486 RVTHRIAMRVPATLLLADGTTAACFTSDYSTGGLGLDAVPGLSLAVGDRLQVCVSRGDRS 545
Query: 70 GRIEGKVVNFDS 81
+V
Sbjct: 546 FPFPVRVSRVTP 557
>gi|119896936|ref|YP_932149.1| hypothetical protein azo0645 [Azoarcus sp. BH72]
gi|119669349|emb|CAL93262.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 120
Score = 39.9 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVP--MFLVGERSIVFV-- 66
++ R F R++ L+ DG E C V ++S G I P + GER ++ +
Sbjct: 3 VEHRHFSRIRFQTGAHLLI-DGREIACEVCDLSLKGALIEAPDPATLPPPGERCLLELQL 61
Query: 67 --EKVGRIEGKVVNFDSNR 83
+ + R+EG V + + R
Sbjct: 62 DSDALVRMEGDVAHVEGRR 80
>gi|126728311|ref|ZP_01744127.1| hypothetical protein SSE37_20012 [Sagittula stellata E-37]
gi|126711276|gb|EBA10326.1| hypothetical protein SSE37_20012 [Sagittula stellata E-37]
Length = 96
Score = 39.9 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 133 QLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDIL----GRVVRIFPGGIAIE 188
+L D + ++++SE+G L + + S+V + VVRI P G+A+
Sbjct: 16 ELRSEDGD-FAATIVNVSETGAFAEGSLPLAVGSRVKLMAMRQPVYASVVRISPRGVALS 74
Query: 189 FSSV 192
F +
Sbjct: 75 FETP 78
>gi|254175978|ref|ZP_04882636.1| glycosyl transferase, group 2 family protein [Burkholderia mallei
ATCC 10399]
gi|160697020|gb|EDP86990.1| glycosyl transferase, group 2 family protein [Burkholderia mallei
ATCC 10399]
Length = 844
Score = 39.9 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 688 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 747
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 748 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 807
Query: 117 CRA 119
R
Sbjct: 808 LRG 810
>gi|53716245|ref|YP_106168.1| glycosyl transferase, group 2 family protein [Burkholderia mallei
ATCC 23344]
gi|124382430|ref|YP_001025809.1| glycosyl transferase, group 2 family protein [Burkholderia mallei
NCTC 10229]
gi|126446204|ref|YP_001077892.1| glycosyl transferase, group 2 family protein [Burkholderia mallei
NCTC 10247]
gi|254201038|ref|ZP_04907403.1| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
mallei FMH]
gi|254205003|ref|ZP_04911356.1| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
mallei JHU]
gi|254359122|ref|ZP_04975394.1| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
mallei 2002721280]
gi|52422215|gb|AAU45785.1| glycosyl transferase, group 2 family protein [Burkholderia mallei
ATCC 23344]
gi|126239058|gb|ABO02170.1| glycosyltransferase, group 2 family [Burkholderia mallei NCTC
10247]
gi|147748650|gb|EDK55725.1| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
mallei FMH]
gi|147754589|gb|EDK61653.1| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
mallei JHU]
gi|148028309|gb|EDK86269.1| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
mallei 2002721280]
gi|261826802|gb|ABM98502.2| glycosyltransferase, group 2 family [Burkholderia mallei NCTC
10229]
Length = 848
Score = 39.9 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 692 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 751
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 752 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 811
Query: 117 CRA 119
R
Sbjct: 812 LRG 814
>gi|294663986|ref|ZP_06729402.1| celullose synthase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|292606240|gb|EFF49475.1| celullose synthase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 731
Score = 39.9 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 9/114 (7%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGRI 72
R+ RV +D+ L DG S GG+ I+ P G + + G +
Sbjct: 579 RSAHRVPLDVPVTLYLPDGGVLPSRSVNFSTGGMAIMLAQPQPIEPGLPVQIGLSHRG-V 637
Query: 73 EGK---VVNFDSNRGYAVRI-VTSENERRKLADKLIWLANKDDLHLQDCRAYGR 122
E VV D + +++ S + R L + D+ L + R
Sbjct: 638 EQTLPAVVRQDRDGQVSIQFTQMSMEQERWLVA---STFARADIWLSQWGQHDR 688
>gi|254185123|ref|ZP_04891712.1| cellulose synthase, catalytic subunit (UDP-forming) [Burkholderia
pseudomallei 1655]
gi|184215715|gb|EDU12696.1| cellulose synthase, catalytic subunit (UDP-forming) [Burkholderia
pseudomallei 1655]
Length = 846
Score = 39.9 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 690 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 749
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 750 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 809
Query: 117 CRA 119
R
Sbjct: 810 LRG 812
>gi|22001530|sp|P58932|BCSA_XANAC RecName: Full=Cellulose synthase catalytic subunit [UDP-forming]
gi|21109886|gb|AAM38361.1| celullose synthase [Xanthomonas axonopodis pv. citri str. 306]
Length = 729
Score = 39.5 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 9/114 (7%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGRI 72
R+ RV +D+ L DG S GG+ I+ P G + + G +
Sbjct: 577 RSAHRVPLDVPVTLYLPDGDVLPSRSVNFSTGGMAIMLAQPQPIEPGLPVQIGLSHRG-V 635
Query: 73 EGK---VVNFDSNRGYAVRI-VTSENERRKLADKLIWLANKDDLHLQDCRAYGR 122
E VV D + +++ S + R L + D+ L + R
Sbjct: 636 EQTLPAVVRQDRDGQVSIQFTQMSMEQERWLVA---STFARADIWLSQWGQHDR 686
>gi|126443249|ref|YP_001063220.1| cellulose synthase, catalytic subunit [Burkholderia pseudomallei
668]
gi|126222740|gb|ABN86245.1| cellulose synthase, catalytic subunit (UDP-forming) [Burkholderia
pseudomallei 668]
Length = 846
Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 690 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 749
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 750 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 809
Query: 117 CRA 119
R
Sbjct: 810 LRG 812
>gi|237508688|ref|ZP_04521403.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
pseudomallei MSHR346]
gi|235000893|gb|EEP50317.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
pseudomallei MSHR346]
Length = 846
Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 690 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 749
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 750 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 809
Query: 117 CRA 119
R
Sbjct: 810 LRG 812
>gi|253686484|ref|YP_003015674.1| cellulose synthase catalytic subunit (UDP-forming) [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251753062|gb|ACT11138.1| cellulose synthase catalytic subunit (UDP-forming) [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 899
Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 39/105 (37%), Gaps = 13/105 (12%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVF 65
++ R RV++ + L DG + C++R+ S GG+ I VG+ +
Sbjct: 689 AVEAKQVRQAHRVEMSMSAAILRPDGHLFPCVLRDYSDGGVGIETRESGILQVGDSVSLL 748
Query: 66 VEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKD 110
+++ + YA + K+ ++ L +
Sbjct: 749 LKR------------GQQEYAFPFSVTRAFDNKIGLRMTNLTIRQ 781
>gi|134282118|ref|ZP_01768824.1| cellulose synthase, catalytic subunit (UDP-forming) [Burkholderia
pseudomallei 305]
gi|134246647|gb|EBA46735.1| cellulose synthase, catalytic subunit (UDP-forming) [Burkholderia
pseudomallei 305]
Length = 846
Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 690 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 749
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 750 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 809
Query: 117 CRA 119
R
Sbjct: 810 LRG 812
>gi|53722598|ref|YP_111583.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
pseudomallei K96243]
gi|76817627|ref|YP_335785.1| glycosyl transferase, group 2 family protein [Burkholderia
pseudomallei 1710b]
gi|217425218|ref|ZP_03456713.1| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
pseudomallei 576]
gi|226196083|ref|ZP_03791669.1| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
pseudomallei Pakistan 9]
gi|254186907|ref|ZP_04893423.1| cellulose synthase, catalytic subunit (UDP-forming) [Burkholderia
pseudomallei Pasteur 52237]
gi|254193834|ref|ZP_04900266.1| cellulose synthase, catalytic subunit (UDP-forming) [Burkholderia
pseudomallei S13]
gi|254265271|ref|ZP_04956136.1| cellulose synthase, catalytic subunit (UDP-forming) [Burkholderia
pseudomallei 1710a]
gi|52213012|emb|CAH39050.1| putative cellulose synthase catalytic subunit [UDP-forming]
[Burkholderia pseudomallei K96243]
gi|76582100|gb|ABA51574.1| glycosyl transferase, group 2 family protein [Burkholderia
pseudomallei 1710b]
gi|157934591|gb|EDO90261.1| cellulose synthase, catalytic subunit (UDP-forming) [Burkholderia
pseudomallei Pasteur 52237]
gi|169650585|gb|EDS83278.1| cellulose synthase, catalytic subunit (UDP-forming) [Burkholderia
pseudomallei S13]
gi|217391823|gb|EEC31850.1| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
pseudomallei 576]
gi|225931976|gb|EEH27977.1| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
pseudomallei Pakistan 9]
gi|254216273|gb|EET05658.1| cellulose synthase, catalytic subunit (UDP-forming) [Burkholderia
pseudomallei 1710a]
Length = 846
Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 690 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 749
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 750 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 809
Query: 117 CRA 119
R
Sbjct: 810 LRG 812
>gi|126456135|ref|YP_001076173.1| cellulose synthase, catalytic subunit [Burkholderia pseudomallei
1106a]
gi|242312477|ref|ZP_04811494.1| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
pseudomallei 1106b]
gi|126229903|gb|ABN93316.1| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
pseudomallei 1106a]
gi|242135716|gb|EES22119.1| cellulose synthase, catalytic subunit, UDP-forming [Burkholderia
pseudomallei 1106b]
Length = 848
Score = 39.5 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R RV + + LL DGT C ++ S GGL + + +G+ V V
Sbjct: 692 EAKQVRVTHRVAMRVPATLLLADGTTAACHTKDYSAGGLGLDAVPLARIALGDTLDVCVS 751
Query: 68 KVGR---IEGKVVNFD-SNRGYAVRIVTSENERR-------KLADKLIWLANKDDLHLQD 116
+ R +V D ++ G +T E ER+ + L W + +
Sbjct: 752 RGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDARAEHDDAP 811
Query: 117 CRA 119
R
Sbjct: 812 LRG 814
>gi|295699210|ref|YP_003607103.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
sp. CCGE1002]
gi|295438423|gb|ADG17592.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
sp. CCGE1002]
Length = 735
Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 11/94 (11%)
Query: 117 CRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSVD--LQIEMFSKVLFN-- 171
R R + R ++ L + +C+ ID SE GV V + +++ M +V +
Sbjct: 574 ERRQIRAVPRVAMKMPVMLKFSTGRTLACETIDYSEGGVGVKLPSTIEVPMQERVTVSLF 633
Query: 172 ------DILGRVVRIFPGGIAIEFSSVQESNIAF 199
V PG + + FSS+
Sbjct: 634 RGDEEYAFPATVSFTEPGRVGLRFSSLSPEQEYE 667
>gi|77748724|ref|NP_643825.2| celullose synthase [Xanthomonas axonopodis pv. citri str. 306]
Length = 731
Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 9/114 (7%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGRI 72
R+ RV +D+ L DG S GG+ I+ P G + + G +
Sbjct: 579 RSAHRVPLDVPVTLYLPDGDVLPSRSVNFSTGGMAIMLAQPQPIEPGLPVQIGLSHRG-V 637
Query: 73 EGK---VVNFDSNRGYAVRI-VTSENERRKLADKLIWLANKDDLHLQDCRAYGR 122
E VV D + +++ S + R L + D+ L + R
Sbjct: 638 EQTLPAVVRQDRDGQVSIQFTQMSMEQERWLVA---STFARADIWLSQWGQHDR 688
>gi|291519664|emb|CBK74885.1| PilZ domain [Butyrivibrio fibrisolvens 16/4]
Length = 220
Score = 39.5 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 26/55 (47%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFV 66
++R RV V G ++ DG ++ V ++S G+ + + +G++ +
Sbjct: 108 ERREDARVMVKKPGSAMMEDGRRFSISVIDVSDSGVSFIGNANRVTIGDKVEINF 162
Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 115 QDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVS-VSVDLQIEMFSKVLF 170
+ R R + + ++ D + S VID+S+SGVS + ++ + KV
Sbjct: 107 SERREDARVMVKKP---GSAMMEDGRRFSISVIDVSDSGVSFIGNANRVTIGDKVEI 160
>gi|115351316|ref|YP_773155.1| cellulose synthase [Burkholderia ambifaria AMMD]
gi|115281304|gb|ABI86821.1| Cellulose synthase (UDP-forming) [Burkholderia ambifaria AMMD]
Length = 845
Score = 39.5 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 12/106 (11%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGR- 71
R R+ + + LL DG+ C + S GGL + + +G+ V V + R
Sbjct: 694 RVTHRIAMRVPATLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAIGDTLTVCVTRGDRP 753
Query: 72 --IEGKVVNFDS-NRGYAVRIVTSENERR-------KLADKLIWLA 107
+V + G + +T E ER+ + L W A
Sbjct: 754 FPFPVRVSRVTPTHVGVSFEALTLEQERQLVQCTFGRADAWLDWHA 799
Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 11/91 (12%)
Query: 110 DDLHLQDCRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFS 166
L + R R V A L+L D + +C D S G+ + L + +
Sbjct: 682 AALAVARETKQVRVTHRIAMRVPATLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAIGD 741
Query: 167 KVLFNDILG--------RVVRIFPGGIAIEF 189
+ G RV R+ P + + F
Sbjct: 742 TLTVCVTRGDRPFPFPVRVSRVTPTHVGVSF 772
>gi|116694734|ref|YP_728945.1| glycosyltransferase [Ralstonia eutropha H16]
gi|113529233|emb|CAJ95580.1| Glycosyltransferase [Ralstonia eutropha H16]
Length = 653
Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 13/83 (15%)
Query: 114 LQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEM--FSKVLF- 170
L R R A L+ D ++ D+S +GV+V+ L + ++
Sbjct: 533 LPRPRKEERF----PHRAAALLRVDGKEYRVTTRDLSCNGVAVTTPLAPAIPAGTEGALW 588
Query: 171 ----NDILGRVVRIFPG--GIAI 187
I RVVR GIA+
Sbjct: 589 LAQAGWIPCRVVRRDGQLLGIAL 611
>gi|114319323|ref|YP_741006.1| type IV pilus assembly PilZ [Alkalilimnicola ehrlichii MLHE-1]
gi|114225717|gb|ABI55516.1| type IV pilus assembly PilZ [Alkalilimnicola ehrlichii MLHE-1]
Length = 212
Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 24/87 (27%), Gaps = 9/87 (10%)
Query: 116 DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF----- 170
D R + R + C + D+S G +V + +V
Sbjct: 117 DRRRHRRVPQGCPVSLW----AHGRRTECAMRDLSRGGAAVEDCDGLNPGDRVSVRIPGF 172
Query: 171 NDILGRVVRIFPGGIAIEFSSVQESNI 197
L VVR I + F S
Sbjct: 173 GMKLAAVVRTRVNRIGLAFESQLPWEP 199
Score = 37.9 bits (87), Expect = 0.78, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+D+R +RV L G C +R++S GG + D G+R V + G
Sbjct: 116 VDRRRHRRVPQGCPVS-LWAHGRRTECAMRDLSRGGAAVE-DCDGLNPGDRVSVRIPGFG 173
Query: 71 RIEGKVVNF 79
VV
Sbjct: 174 MKLAAVVRT 182
>gi|172060351|ref|YP_001808003.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
ambifaria MC40-6]
gi|171992868|gb|ACB63787.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
ambifaria MC40-6]
Length = 845
Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 12/106 (11%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGR- 71
R R+ + + LL DG+ C + S GGL + + +G+ V V + R
Sbjct: 694 RVTHRIAMRVPATLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAIGDTLTVCVTRGDRP 753
Query: 72 --IEGKVVNFDS-NRGYAVRIVTSENERR-------KLADKLIWLA 107
+V + G + +T E ER+ + L W A
Sbjct: 754 FPFPVRVSRVTPTHVGVSFEALTLEQERQLVQCTFGRADAWLDWHA 799
Score = 37.6 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 11/91 (12%)
Query: 110 DDLHLQDCRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFS 166
L + R R V A L+L D + +C D S G+ + L + +
Sbjct: 682 AALAVARETRQVRVTHRIAMRVPATLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAIGD 741
Query: 167 KVLFNDILG--------RVVRIFPGGIAIEF 189
+ G RV R+ P + + F
Sbjct: 742 TLTVCVTRGDRPFPFPVRVSRVTPTHVGVSF 772
>gi|254245680|ref|ZP_04939001.1| Glycosyl transferase [Burkholderia cenocepacia PC184]
gi|124870456|gb|EAY62172.1| Glycosyl transferase [Burkholderia cenocepacia PC184]
Length = 585
Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGR- 71
R R+ + + LL DG+ C + S GGL + + VG+ V V + R
Sbjct: 434 RVTHRIAMRVPAMLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAVGDTLTVCVTRGDRA 493
Query: 72 --IEGKVVNFDS-NRGYAVRIVTSENER 96
+V + G + +T E ER
Sbjct: 494 FPFPVRVTRVTPTHVGVSFEALTLEQER 521
Score = 36.0 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 11/91 (12%)
Query: 110 DDLHLQDCRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFS 166
L + R R V A L+L D + +C D S G+ + L + +
Sbjct: 422 AALAVARETKQVRVTHRIAMRVPAMLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAVGD 481
Query: 167 KVLFNDILG--------RVVRIFPGGIAIEF 189
+ G RV R+ P + + F
Sbjct: 482 TLTVCVTRGDRAFPFPVRVTRVTPTHVGVSF 512
>gi|170692073|ref|ZP_02883237.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
graminis C4D1M]
gi|170143357|gb|EDT11521.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
graminis C4D1M]
Length = 855
Score = 39.5 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 11/119 (9%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERS---IV 64
+ R RV + + LL DGT C+ + S GGL + V G+ +
Sbjct: 699 EAKQIRGSHRVPMSMPATLLLSDGTTVACMTSDYSTGGLGLHVAPGLPLAEGDWLQVCVS 758
Query: 65 FVEKVGRIEGKVVNFDSNRGYAVRI-VTSENERRKLADKL-----IWLANKDDLHLQDC 117
++ VV + + V+ + + R+L W+A D+ ++
Sbjct: 759 RGDRQFAFPVHVVRA-AGQHLGVQFDELTLEQERQLVQCTFGRADAWIAAADEARTEED 816
>gi|298504420|gb|ADI83143.1| PilZ domain protein [Geobacter sulfurreducens KN400]
Length = 119
Score = 39.5 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 16/86 (18%)
Query: 116 DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN---- 171
+ R + R ++ ++ T +V ++S G+ V D +I + +V +
Sbjct: 2 EKRKFERI----DFRSEAIIRHNGTSFRAEVENVSLKGLFVRTDQKIPINEQVDVSMFFF 57
Query: 172 --------DILGRVVRIFPGGIAIEF 189
+ VVRI GI + F
Sbjct: 58 GSSAELSFSLEASVVRITDDGIGLNF 83
>gi|170703653|ref|ZP_02894389.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
ambifaria IOP40-10]
gi|170131441|gb|EDT00033.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
ambifaria IOP40-10]
Length = 845
Score = 39.5 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 12/106 (11%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGR- 71
R R+ + + LL DG+ C + S GGL + + +G+ V V + R
Sbjct: 694 RVTHRIAMRVPATLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAIGDTLTVCVTRGDRP 753
Query: 72 --IEGKVVNFDS-NRGYAVRIVTSENERR-------KLADKLIWLA 107
+V + G + +T E ER+ + L W A
Sbjct: 754 FPFPVRVSRVTPTHVGVSFEALTLEQERQLVQCTFGRADAWLDWHA 799
Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 11/91 (12%)
Query: 110 DDLHLQDCRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFS 166
L + R R V A L+L D + +C D S G+ + L + +
Sbjct: 682 AALAVARETKQVRVTHRIAMRVPATLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAIGD 741
Query: 167 KVLFNDILG--------RVVRIFPGGIAIEF 189
+ G RV R+ P + + F
Sbjct: 742 TLTVCVTRGDRPFPFPVRVSRVTPTHVGVSF 772
>gi|126729578|ref|ZP_01745391.1| hypothetical protein SSE37_03870 [Sagittula stellata E-37]
gi|126709697|gb|EBA08750.1| hypothetical protein SSE37_03870 [Sagittula stellata E-37]
Length = 242
Score = 39.5 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCD--VPMFLVGERSIVFVEKVGR 71
R QRV V + R L DG C + +IS GG + D + + + G+
Sbjct: 142 RRSQRVSVKVAARC-LQDGYVIPCEILDISEGGARLRFDSLGIAGIRDAPLNLQIPGYGQ 200
Query: 72 IEGKVVNFDSNRGYA--VRIVTSENERRKLADKL 103
+ F G+A ++ ++ L+ ++
Sbjct: 201 F---LAEFRWRHGFAAGAEFQLTDRQKELLSRRI 231
Score = 38.7 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 62/178 (34%), Gaps = 34/178 (19%)
Query: 14 RAFQRVKVDLKGRFL-LFDGTEYNCIVREISPGGLCI--VCDVPMFLVGERSIVFVEKVG 70
R R+ ++L R + + DG E VR +S GG+ + + + + +G
Sbjct: 4 RRSSRIAINL--RVIAIQDGLEIPGTVRNLSGGGIQMDLEAISSSAIRSSPLELEISGIG 61
Query: 71 RIEGKVV-NFDSNRGYAVRIVTSENERRKL-ADKLIWLANKDDLHLQ------------- 115
R ++V ++ G RI S + KL L+ KD
Sbjct: 62 RFPARIVWRAANSLGAEFRISDSMRQLVKLRIAALVRELAKDSPGTSTETPTQTELPQSQ 121
Query: 116 --------------DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVD 159
+ AY R+ R A L D C+++DISE G + D
Sbjct: 122 EVSDPVDPPPIATAEEPAYLRRSQRVSVKVAARCLQDGYVIPCEILDISEGGARLRFD 179
>gi|171321495|ref|ZP_02910437.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
ambifaria MEX-5]
gi|171093223|gb|EDT38429.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
ambifaria MEX-5]
Length = 845
Score = 39.5 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 12/107 (11%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGR- 71
R R+ + + LL DG+ C + S GGL + + +G+ V V + R
Sbjct: 694 RVTHRIAMRVPATLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAIGDTLTVCVTRGDRP 753
Query: 72 --IEGKVVNFDS-NRGYAVRIVTSENERR-------KLADKLIWLAN 108
+V + G + +T E ER+ + L W A
Sbjct: 754 FPFPVRVSRVTPTHVGVSFEALTLEQERQLVQCTFGRADAWLDWHAG 800
Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 11/91 (12%)
Query: 110 DDLHLQDCRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFS 166
L + R R V A L+L D + +C D S G+ + L + +
Sbjct: 682 AALAVARETKQVRVTHRIAMRVPATLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAIGD 741
Query: 167 KVLFNDILG--------RVVRIFPGGIAIEF 189
+ G RV R+ P + + F
Sbjct: 742 TLTVCVTRGDRPFPFPVRVSRVTPTHVGVSF 772
>gi|154253058|ref|YP_001413882.1| hypothetical protein Plav_2617 [Parvibaculum lavamentivorans DS-1]
gi|154157008|gb|ABS64225.1| hypothetical protein Plav_2617 [Parvibaculum lavamentivorans DS-1]
Length = 120
Score = 39.1 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 19 VKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVN 78
+ ++GR + G + C++ E+S G +V P+ +G + V VG G+
Sbjct: 22 IATRVEGRIVFA-GVDAECLIHEMSATG-AVVEVAPLPALGAEIALDVPGVGFARGRATR 79
Query: 79 FDSNRGYAVRIVTSENERRKLADKLIWLANKDDL 112
+ ++ + + E+ + KL D+LI A ++
Sbjct: 80 YPADGLVGIDLAVPEDRQDKLTDRLILAAFRNPP 113
>gi|307295466|ref|ZP_07575302.1| type IV pilus assembly PilZ [Sphingobium chlorophenolicum L-1]
gi|306878505|gb|EFN09725.1| type IV pilus assembly PilZ [Sphingobium chlorophenolicum L-1]
Length = 114
Score = 39.1 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 33/108 (30%), Gaps = 10/108 (9%)
Query: 101 DKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDL 160
L L D + R + V AQ H ++I+IS G+ +
Sbjct: 3 ASLAHLNRSPDPAVNQRRVQRDLVDMVSHVTAQ-----GRSHGVRIINISALGLMCRTEA 57
Query: 161 QIEMFSKVLFN----DILGRVVRIFPGG-IAIEFSSVQESNIAFKSLI 203
Q+ + +V VR G I +EF + L
Sbjct: 58 QLAIGERVTVWLPVVKEQAGEVRWAEEGRIGVEFRERIDPRTYDAMLS 105
>gi|297580227|ref|ZP_06942154.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297535873|gb|EFH74707.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 236
Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISES--GVSVSVDLQIEMFSKVLFN---- 171
R++ R + DN ++ ++D S S GV + + ++ M SKV N
Sbjct: 130 RSHERYKVAIPAEVS----EDNKNYAGTLVDFSISGCGVFIGGENELHMGSKVRINSELD 185
Query: 172 -----DILGRVV--RIFPGG--IAIEFSSVQE-SNIAFKSLINHCY 207
+ +V R G I I+F + K ++ H +
Sbjct: 186 PFLPKRLKSHIVNIRRKSNGHLIGIQFEQPITLTETLKKQVLEHAF 231
>gi|229526742|ref|ZP_04416146.1| hypothetical protein VCA_000872 [Vibrio cholerae bv. albensis
VL426]
gi|229336900|gb|EEO01918.1| hypothetical protein VCA_000872 [Vibrio cholerae bv. albensis
VL426]
Length = 221
Score = 39.1 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISES--GVSVSVDLQIEMFSKVLFN---- 171
R++ R + DN ++ ++D S S GV + + ++ M SKV N
Sbjct: 115 RSHERYKVAIPAEVS----EDNKNYAGTLVDFSISGCGVFIGGENELHMGSKVRINSELD 170
Query: 172 -----DILGRVV--RIFPGG--IAIEFSSVQE-SNIAFKSLINHCY 207
+ +V R G I I+F + K ++ H +
Sbjct: 171 PFLPKRLKSHIVNIRRKSNGHLIGIQFEQPITLTETLKKQVLEHAF 216
>gi|323934087|gb|EGB30530.1| cellulose synthase catalytic [Escherichia coli E1520]
Length = 701
Score = 39.1 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIV----CDVPMFLVGERS 62
+++ R R++V G LL +GT C V + S GGL I D +
Sbjct: 550 SIEQKQVRVSPRIEVVFSGHLLLTNGTRNPCSVIDFSEGGLGITLHGGVDNRNIEKNKPM 609
Query: 63 IVFVEKVGRIEGKV 76
+++ G E +
Sbjct: 610 TLYL-HTGDEECAI 622
Score = 34.9 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 102 KLIWLANK-----DDLHLQDCRAYGRKITRDREVDA-QLVLNDNTKHSCKVIDISESGVS 155
L+WLA L + + R R V + L+L + T++ C VID SE G+
Sbjct: 532 CLMWLAYNTIIIGATLAVSIEQKQVRVSPRIEVVFSGHLLLTNGTRNPCSVIDFSEGGLG 591
Query: 156 VS 157
++
Sbjct: 592 IT 593
>gi|153217331|ref|ZP_01951082.1| hypothetical protein A55_A0587 [Vibrio cholerae 1587]
gi|124113647|gb|EAY32467.1| hypothetical protein A55_A0587 [Vibrio cholerae 1587]
Length = 236
Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFSKVLFN---- 171
R++ R + DN ++ ++D S SG V + + ++ M SKV N
Sbjct: 130 RSHERYKVAIPAEVS----EDNKNYAGTLVDFSISGCGVFIRGENELHMGSKVRINSELD 185
Query: 172 -----DILGRVV--RIFPGG--IAIEFSSVQE-SNIAFKSLINHCY 207
+ +V R G I I+F + K ++ H +
Sbjct: 186 PFLPKRLKSHIVNIRRKSNGHLIGIQFEQPITLTETLKKQVLEHAF 231
>gi|121725912|ref|ZP_01679212.1| hypothetical protein VCV52_A0686 [Vibrio cholerae V52]
gi|147671666|ref|YP_001215510.1| hypothetical protein VC0395_0672 [Vibrio cholerae O395]
gi|153829849|ref|ZP_01982516.1| hypothetical protein A59_A0834 [Vibrio cholerae 623-39]
gi|254226170|ref|ZP_04919765.1| hypothetical protein VCV51_0888 [Vibrio cholerae V51]
gi|254285756|ref|ZP_04960719.1| hypothetical protein A33_A1014 [Vibrio cholerae AM-19226]
gi|121631677|gb|EAX64045.1| hypothetical protein VCV52_A0686 [Vibrio cholerae V52]
gi|125621272|gb|EAZ49611.1| hypothetical protein VCV51_0888 [Vibrio cholerae V51]
gi|146314049|gb|ABQ18589.1| hypothetical protein VC0395_0672 [Vibrio cholerae O395]
gi|148874650|gb|EDL72785.1| hypothetical protein A59_A0834 [Vibrio cholerae 623-39]
gi|150424253|gb|EDN16191.1| hypothetical protein A33_A1014 [Vibrio cholerae AM-19226]
gi|227015204|gb|ACP11413.1| conserved hypothetical protein [Vibrio cholerae O395]
Length = 236
Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFSKVLFN---- 171
R++ R + DN ++ ++D S SG V + + ++ M SKV N
Sbjct: 130 RSHERYKVAIPAEVS----EDNKNYAGTLVDFSISGCGVFIRGENELHMGSKVRINSELD 185
Query: 172 -----DILGRVV--RIFPGG--IAIEFSSVQE-SNIAFKSLINHCY 207
+ +V R G I I+F + K ++ H +
Sbjct: 186 PFLPKRLKSHIVNIRRKSNGHLIGIQFEQPITLTETLKKQVLEHAF 231
>gi|15601491|ref|NP_233122.1| hypothetical protein VCA0735 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|153819433|ref|ZP_01972100.1| hypothetical protein A5C_A0922 [Vibrio cholerae NCTC 8457]
gi|153820743|ref|ZP_01973410.1| hypothetical protein A5E_A0743 [Vibrio cholerae B33]
gi|227812302|ref|YP_002812312.1| hypothetical protein VCM66_A0693 [Vibrio cholerae M66-2]
gi|254849895|ref|ZP_05239245.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|298499531|ref|ZP_07009337.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9658156|gb|AAF96634.1| hypothetical protein VC_A0735 [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|126510041|gb|EAZ72635.1| hypothetical protein A5C_A0922 [Vibrio cholerae NCTC 8457]
gi|126521786|gb|EAZ79009.1| hypothetical protein A5E_A0743 [Vibrio cholerae B33]
gi|227011444|gb|ACP07655.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|254845600|gb|EET24014.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297541512|gb|EFH77563.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 236
Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFSKVLFN---- 171
R++ R + DN ++ ++D S SG V + + ++ M SKV N
Sbjct: 130 RSHERYKVAIPAEVS----EDNKNYAGTLVDFSISGCGVFIRGENELHMGSKVRINSELD 185
Query: 172 -----DILGRVV--RIFPGG--IAIEFSSVQE-SNIAFKSLINHCY 207
+ +V R G I I+F + K ++ H +
Sbjct: 186 PFLPKRLKSHIVNIRRKSNGHLIGIQFEQPITLTETLKKQVLEHAF 231
>gi|121585521|ref|ZP_01675317.1| type IV pilus assembly protein PilZ [Vibrio cholerae 2740-80]
gi|153820660|ref|ZP_01973327.1| type IV pilus assembly protein PilZ [Vibrio cholerae B33]
gi|229506108|ref|ZP_04395617.1| hypothetical protein VCF_001322 [Vibrio cholerae BX 330286]
gi|229510035|ref|ZP_04399515.1| hypothetical protein VCE_001436 [Vibrio cholerae B33]
gi|229516404|ref|ZP_04405851.1| hypothetical protein VCC_000419 [Vibrio cholerae RC9]
gi|229605639|ref|YP_002876343.1| hypothetical protein VCD_000585 [Vibrio cholerae MJ-1236]
gi|255746503|ref|ZP_05420450.1| hypothetical protein VCH_002891 [Vibrio cholera CIRS 101]
gi|262152399|ref|ZP_06028532.1| hypothetical protein VIG_000598 [Vibrio cholerae INDRE 91/1]
gi|121550138|gb|EAX60152.1| type IV pilus assembly protein PilZ [Vibrio cholerae 2740-80]
gi|126521703|gb|EAZ78926.1| type IV pilus assembly protein PilZ [Vibrio cholerae B33]
gi|229346285|gb|EEO11256.1| hypothetical protein VCC_000419 [Vibrio cholerae RC9]
gi|229352480|gb|EEO17420.1| hypothetical protein VCE_001436 [Vibrio cholerae B33]
gi|229356459|gb|EEO21377.1| hypothetical protein VCF_001322 [Vibrio cholerae BX 330286]
gi|229372125|gb|ACQ62547.1| hypothetical protein VCD_000585 [Vibrio cholerae MJ-1236]
gi|255736257|gb|EET91655.1| hypothetical protein VCH_002891 [Vibrio cholera CIRS 101]
gi|262030850|gb|EEY49481.1| hypothetical protein VIG_000598 [Vibrio cholerae INDRE 91/1]
Length = 221
Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFSKVLFN---- 171
R++ R + DN ++ ++D S SG V + + ++ M SKV N
Sbjct: 115 RSHERYKVAIPAEVS----EDNKNYAGTLVDFSISGCGVFIRGENELHMGSKVRINSELD 170
Query: 172 -----DILGRVV--RIFPGG--IAIEFSSVQE-SNIAFKSLINHCY 207
+ +V R G I I+F + K ++ H +
Sbjct: 171 PFLPKRLKSHIVNIRRKSNGHLIGIQFEQPITLTETLKKQVLEHAF 216
>gi|153800725|ref|ZP_01955311.1| type IV pilus assembly protein PilZ [Vibrio cholerae MZO-3]
gi|229514184|ref|ZP_04403645.1| hypothetical protein VCB_001832 [Vibrio cholerae TMA 21]
gi|229528390|ref|ZP_04417781.1| hypothetical protein VCG_001475 [Vibrio cholerae 12129(1)]
gi|262168576|ref|ZP_06036272.1| hypothetical protein VIJ_001762 [Vibrio cholerae RC27]
gi|262190200|ref|ZP_06048477.1| hypothetical protein VIH_000572 [Vibrio cholerae CT 5369-93]
gi|124123700|gb|EAY42443.1| type IV pilus assembly protein PilZ [Vibrio cholerae MZO-3]
gi|229334752|gb|EEO00238.1| hypothetical protein VCG_001475 [Vibrio cholerae 12129(1)]
gi|229348164|gb|EEO13122.1| hypothetical protein VCB_001832 [Vibrio cholerae TMA 21]
gi|262023105|gb|EEY41810.1| hypothetical protein VIJ_001762 [Vibrio cholerae RC27]
gi|262033920|gb|EEY52383.1| hypothetical protein VIH_000572 [Vibrio cholerae CT 5369-93]
gi|327485742|gb|AEA80148.1| hypothetical protein VCLMA_B0518 [Vibrio cholerae LMA3894-4]
Length = 221
Score = 39.1 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFSKVLFN---- 171
R++ R + DN ++ ++D S SG V + + ++ M SKV N
Sbjct: 115 RSHERYKVAIPAEVS----EDNKNYAGTLVDFSISGCGVFIRGENELHMGSKVRINSELD 170
Query: 172 -----DILGRVV--RIFPGG--IAIEFSSVQE-SNIAFKSLINHCY 207
+ +V R G I I+F + K ++ H +
Sbjct: 171 PFLPKRLKSHIVNIRRKSNGHLIGIQFEQPITLTETLKKQVLEHAF 216
>gi|163849989|ref|YP_001638032.1| hypothetical protein Mext_0546 [Methylobacterium extorquens PA1]
gi|163661594|gb|ABY28961.1| hypothetical protein Mext_0546 [Methylobacterium extorquens PA1]
Length = 185
Score = 39.1 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGR 176
R R T A + L D T+ C V DIS+SG + V E+ S + I+GR
Sbjct: 71 RREERTSTN---WIALIRLFDGTEIPCNVKDISKSGAKLGVPATYELPSAFMI-RIIGR 125
>gi|167566239|ref|ZP_02359155.1| glycosyl transferase, group 2 family protein [Burkholderia
oklahomensis EO147]
Length = 844
Score = 39.1 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R R+ + + L DGT C ++ S GGL + +G+ V V
Sbjct: 690 EAKQVRVTHRIAMRVPATLLFADGTTAACHTKDYSAGGLGLDAVPGARLALGDTLDVCVN 749
Query: 68 KVGR---IEGKVVNFDS 81
+ GR +V D
Sbjct: 750 RGGRPFHFPVRVTRVDE 766
>gi|170744172|ref|YP_001772827.1| methyl-accepting chemotaxis sensory transducer [Methylobacterium
sp. 4-46]
gi|168198446|gb|ACA20393.1| methyl-accepting chemotaxis sensory transducer [Methylobacterium
sp. 4-46]
Length = 713
Score = 39.1 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 7/105 (6%)
Query: 5 IHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIV 64
+ D R RV F +G + E+S GG I G +
Sbjct: 439 VRAFSATDNRRAPRVPARWPASFEAPEGR-ASLRTIEVSEGGFLIDAPPFATEAGREGTL 497
Query: 65 FVEKVGRIEGKVVNFDSNRGYAVRIVTS-----ENERRKLADKLI 104
+ +GR +V + G ++I S + R ++A L+
Sbjct: 498 DLAGIGRFAVEVA-GEQPLGTRLKIRPSEPEAMDRLRERIAAILV 541
>gi|78049199|ref|YP_365374.1| cellulose synthase catalytic subunit [UDP-forming] (fragment)
[Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|78037629|emb|CAJ25374.1| cellulose synthase catalytic subunit [UDP-forming] (fragment)
[Xanthomonas campestris pv. vesicatoria str. 85-10]
Length = 270
Score = 39.1 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 9/114 (7%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGRI 72
R+ RV +D+ L DG S GG+ I P G + + G +
Sbjct: 118 RSAHRVPLDVPVTLYLPDGGVLPSRSVNFSTGGMAITLAQPQPIEPGLPVQIGLSHRG-V 176
Query: 73 EGK---VVNFDSNRGYAVRI-VTSENERRKLADKLIWLANKDDLHLQDCRAYGR 122
E VV D + +++ S + R L + D+ L + R
Sbjct: 177 EQTLPAVVRQDRDGQVSIQFTQMSMEQERWLVA---STFARADIWLSQWGQHDR 227
>gi|221202079|ref|ZP_03575115.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
multivorans CGD2M]
gi|221204790|ref|ZP_03577807.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
multivorans CGD2]
gi|221175647|gb|EEE08077.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
multivorans CGD2]
gi|221178162|gb|EEE10573.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
multivorans CGD2M]
Length = 846
Score = 39.1 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERS---IVFVEKV 69
R R+ + + LL DGT C + S GGL + VG+R + ++
Sbjct: 695 RVTHRIAMRVPATLLLADGTTAACFTSDYSTGGLGLDAVPGLSLAVGDRLQVCVSRGDRS 754
Query: 70 GRIEGKVVNFDS 81
+V
Sbjct: 755 FPFPVRVSRVTP 766
>gi|227113869|ref|ZP_03827525.1| cellulose synthase catalytic subunit [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 899
Score = 38.7 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 13/105 (12%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVF 65
++ R RV++ + L DG + C++R+ S GG+ + VG+ +
Sbjct: 689 AVEAKQVRQAHRVEMSMSAAILRADGHLFPCVLRDYSDGGVGVEARESGILQVGDSVSLL 748
Query: 66 VEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKD 110
+++ + YA + K+ ++ L +
Sbjct: 749 LKR------------GQQEYAFPFSVTRAFDNKIGLRMTNLTIRQ 781
>gi|58428926|gb|AAW77927.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa]
Length = 272
Score = 38.7 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 35/90 (38%), Gaps = 10/90 (11%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRI 72
QR F RVK+ + R++ + + + ++S GG G+ ++
Sbjct: 6 QRQFARVKLPARIRYIGANREGVDARLLDLSAGGFAFTASGAPIQPGD---LY------- 55
Query: 73 EGKVVNFDSNRGYAVRIVTSENERRKLADK 102
+GK++ + +++ + + +
Sbjct: 56 KGKLLFQVDSISFSLEVEFQVRSVDPASRR 85
>gi|326387951|ref|ZP_08209557.1| hypothetical protein Y88_0866 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207997|gb|EGD58808.1| hypothetical protein Y88_0866 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 112
Score = 38.7 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 4 GIHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSI 63
G L DQR R VDL + + +S G + + GER
Sbjct: 3 GGAQLSVTDQRRSTRHPVDLPTIAEHRRLGDVLLQIVNLSTTGFMTRGQLDLGR-GERVT 61
Query: 64 VFVEKVGRIEGKVVNFD-SNRGYAVR 88
+ + ++GRIE +V D G+
Sbjct: 62 IRLPQIGRIEAFLVWADQDRAGFQFE 87
>gi|240137122|ref|YP_002961591.1| hypothetical protein MexAM1_META1p0366 [Methylobacterium extorquens
AM1]
gi|240007088|gb|ACS38314.1| hypothetical protein MexAM1_META1p0366 [Methylobacterium extorquens
AM1]
Length = 145
Score = 38.7 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGR 176
R R T A + L D T+ C V DIS+SG + V E+ S + I+GR
Sbjct: 31 RREERTSTN---WIALIRLFDGTEIPCNVKDISKSGAKLGVPATYELPSAFMI-RIIGR 85
>gi|168260643|ref|ZP_02682616.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|205350332|gb|EDZ36963.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
Length = 874
Score = 38.7 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + G DG ++C V + S GGL I + L G++ +
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
++ G+ +VV N
Sbjct: 749 LKH-GQQEYVFPTQVVRVTGNE 769
>gi|330994518|ref|ZP_08318442.1| Putative cellulose synthase 3 [Gluconacetobacter sp. SXCC-1]
gi|329758372|gb|EGG74892.1| Putative cellulose synthase 3 [Gluconacetobacter sp. SXCC-1]
Length = 1422
Score = 38.7 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Query: 4 GIHNLQFIDQRAF-QRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERS 62
G+ + QR RV L + G + C ++S GG + G R
Sbjct: 485 GVAAARETRQRRHSHRVAASLPFELVDAQGQVHACRSVDVSMGGCQLDAATVPGAAGGRV 544
Query: 63 IVF 65
++
Sbjct: 545 MLR 547
>gi|294011410|ref|YP_003544870.1| hypothetical protein SJA_C1-14240 [Sphingobium japonicum UT26S]
gi|292674740|dbj|BAI96258.1| hypothetical protein SJA_C1-14240 [Sphingobium japonicum UT26S]
Length = 117
Score = 38.7 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 35/109 (32%), Gaps = 12/109 (11%)
Query: 101 DKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDL 160
L L D + RA + + AQ H ++I+IS G+ +
Sbjct: 6 ASLSHLNQSRDSAVNQRRAQRDLVDMVSHITAQ-----GRTHGTRIINISALGLMCRTEA 60
Query: 161 QIEMFSKVL-----FNDILGRVVRIFPGG-IAIEFSSVQESNIAFKSLI 203
+ M +V D V R G I +EF E + L
Sbjct: 61 PLGMGERVTIWLPVVKDHAAEV-RWSEDGRIGVEFLKPIEPRVYEAMLS 108
>gi|15643667|ref|NP_228713.1| hypothetical protein TM0905 [Thermotoga maritima MSB8]
gi|4981441|gb|AAD35986.1|AE001755_9 hypothetical protein TM_0905 [Thermotoga maritima MSB8]
Length = 229
Score = 38.7 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Query: 8 LQFIDQRAFQRVKVDLKGRFLLFDGTEYNCI--VREISPGGLCIVC-DVPMFLVGERSIV 64
L+ I +R F+R+K+ L+G + + E R+ S GG+ +V D+ +
Sbjct: 106 LRKIQRRRFKRIKIFLEGTYRVASRDEPPKRFVTRDFSAGGMLMVVEDILTPEQIIYVTL 165
Query: 65 FVEKVGRIEGKVVNFDSNRGYAVRIVTSENE 95
+++ +++ G + T E
Sbjct: 166 DLDEDLKLKDHPARVVREAG---ALETGERM 193
>gi|254559134|ref|YP_003066229.1| hypothetical protein METDI0518 [Methylobacterium extorquens DM4]
gi|254266412|emb|CAX22176.1| hypothetical protein METDI0518 [Methylobacterium extorquens DM4]
Length = 145
Score = 38.7 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGR 176
R R T A + L D T+ C V DIS+SG + V E+ S + I+GR
Sbjct: 31 RREERTSTN---WIALIRLFDGTEIPCNVKDISKSGAKLGVPATYELPSAFMI-RIIGR 85
>gi|218528528|ref|YP_002419344.1| hypothetical protein Mchl_0481 [Methylobacterium chloromethanicum
CM4]
gi|218520831|gb|ACK81416.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 150
Score = 38.7 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGR 176
R R T A + L D T+ C V DIS+SG + V E+ S + I+GR
Sbjct: 36 RREERTSTN---WIALIRLFDGTEIPCNVKDISKSGAKLGVPATYELPSAFMI-RIIGR 90
>gi|148269167|ref|YP_001243627.1| type IV pilus assembly PilZ [Thermotoga petrophila RKU-1]
gi|170287829|ref|YP_001738067.1| type IV pilus assembly PilZ [Thermotoga sp. RQ2]
gi|281411465|ref|YP_003345544.1| type IV pilus assembly PilZ [Thermotoga naphthophila RKU-10]
gi|147734711|gb|ABQ46051.1| type IV pilus assembly PilZ [Thermotoga petrophila RKU-1]
gi|170175332|gb|ACB08384.1| type IV pilus assembly PilZ [Thermotoga sp. RQ2]
gi|281372568|gb|ADA66130.1| type IV pilus assembly PilZ [Thermotoga naphthophila RKU-10]
Length = 229
Score = 38.7 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 40/106 (37%), Gaps = 12/106 (11%)
Query: 8 LQFIDQRAFQRVKVDLKGRFLLFDGTEYNCI--VREISPGGLCIVC-DVPMFLVGERSIV 64
L+ I +R F+R+K+ L+G + + E ++ S GG+ +V D+ +
Sbjct: 106 LRKIQRRRFKRIKIFLEGTYRVASRDEPPKRFVTKDFSAGGMLMVAEDILTPEQIIYVTL 165
Query: 65 FVEKVGRIEGKVVNFDSNRGYAVR---------IVTSENERRKLAD 101
+++ +++ G + S RKL
Sbjct: 166 ELDEDLKLKDHPARIVREAGILETGERMYGVEFLNVSPALERKLVS 211
>gi|161525093|ref|YP_001580105.1| cellulose synthase catalytic subunit [Burkholderia multivorans ATCC
17616]
gi|189350164|ref|YP_001945792.1| UDP-forming cellulose synthase [Burkholderia multivorans ATCC
17616]
gi|160342522|gb|ABX15608.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
multivorans ATCC 17616]
gi|189334186|dbj|BAG43256.1| UDP-forming cellulose synthase [Burkholderia multivorans ATCC
17616]
Length = 846
Score = 38.7 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERS---IVFVEKV 69
R R+ + + LL DGT C + S GGL + VG+R + ++
Sbjct: 695 RVTHRIAMRVPATLLLADGTTAACFTSDYSTGGLGLDAVPGLSLAVGDRLQVCVSRGDRS 754
Query: 70 GRIEGKVVNFDS 81
+V
Sbjct: 755 FPFPVRVSRVTP 766
>gi|317131839|ref|YP_004091153.1| glycosyl transferase family 2 [Ethanoligenens harbinense YUAN-3]
gi|315469818|gb|ADU26422.1| glycosyl transferase family 2 [Ethanoligenens harbinense YUAN-3]
Length = 668
Score = 38.7 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 15/90 (16%)
Query: 120 YGRKITRDREVDAQLVLNDNTK--HSCKVIDISESGVSVSVDL-------QIEMFSKVLF 170
+ R R A L+ SC ++D+SE+GV + D ++++
Sbjct: 540 HLRATERIPGRAAVLLRAAGRTEPISCSLLDLSETGVRLECDTVNLQKSDRVQIDFPYAT 599
Query: 171 NDILGRVVRI-----FPGGIAIEFSSVQES 195
+ VVR +A+ F+ + E
Sbjct: 600 G-VRATVVRRKVWENRSDEMALRFTELSEK 628
>gi|325926660|ref|ZP_08187974.1| cellulose synthase catalytic subunit (UDP-forming) [Xanthomonas
perforans 91-118]
gi|325543012|gb|EGD14461.1| cellulose synthase catalytic subunit (UDP-forming) [Xanthomonas
perforans 91-118]
Length = 714
Score = 38.7 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 9/114 (7%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGRI 72
R+ RV +D+ L DG S GG+ I P G + + G +
Sbjct: 562 RSAHRVPLDVPVTLYLPDGGVLPSRSVNFSTGGMAITLAQPQPIEPGLPVQIGLSHRG-V 620
Query: 73 EGK---VVNFDSNRGYAVRI-VTSENERRKLADKLIWLANKDDLHLQDCRAYGR 122
E VV D + +++ S + R L + D+ L + R
Sbjct: 621 EQTLPAVVRQDRDGQVSIQFTQMSMEQERWLVA---STFARADIWLLQWGQHDR 671
>gi|349068|gb|AAC36876.1| alginate synthesis-related protein [Pseudomonas aeruginosa]
gi|740003|prf||2004288B alginate synthesis-related protein
Length = 316
Score = 38.3 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 35/90 (38%), Gaps = 10/90 (11%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRI 72
QR F RVK+ + R++ + + + ++S GG G+ ++
Sbjct: 16 QRQFARVKLPARIRYIGANREGVDARLLDLSAGGFAFTASGAPIQPGD---LY------- 65
Query: 73 EGKVVNFDSNRGYAVRIVTSENERRKLADK 102
+GK++ + +++ + + +
Sbjct: 66 KGKLLFQVDSISFSLEVEFQVRSVDPASRR 95
>gi|323495677|ref|ZP_08100747.1| hypothetical protein VISI1226_04754 [Vibrio sinaloensis DSM 21326]
gi|323319144|gb|EGA72085.1| hypothetical protein VISI1226_04754 [Vibrio sinaloensis DSM 21326]
Length = 245
Score = 38.3 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 50/176 (28%), Gaps = 17/176 (9%)
Query: 30 FDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDS-NRGYAVR 88
G + C I I+ + + + ++ V G +
Sbjct: 47 PVGRTFRCKTAFIGTHSDSIILAELPKISDDDLAFYFQE--GFWATVRAISPRGEGAIIH 104
Query: 89 IVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVID 148
T K ++ L+ D+ + R R K C++ D
Sbjct: 105 FRTQLQHIVKEPLPIVMLSIPKDMQVSQLRKEPRFDVNLNAKATTET----RKLDCEIRD 160
Query: 149 ISESGVSVSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFSSVQESNIAFKSLIN 204
+S+SG + + + VV+I G I+F F ++ N
Sbjct: 161 LSKSGCRFIA---PPLSRPFQVGEEVALVVQIH-NGKQIQF------EPLFGTICN 206
>gi|127513736|ref|YP_001094933.1| type IV pilus assembly PilZ [Shewanella loihica PV-4]
gi|126639031|gb|ABO24674.1| type IV pilus assembly PilZ [Shewanella loihica PV-4]
Length = 796
Score = 38.3 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 56/151 (37%), Gaps = 22/151 (14%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIV--------- 64
RA +R+ ++ L +E I ++S GG I V L E+ ++
Sbjct: 143 RAEERMNYAIRIGVLQPGRSEVKGITVDLSVGGARIRLPVDHGLNPEQPLIVKLLELSAE 202
Query: 65 -FVEKVGR-IEGKVVNFDSNRGY----AVRIVTSENERRKLADKLIWLANKDDLHLQD-- 116
+ + + + +E +VV+ +SN + R+ S+ LA+ + + + + D
Sbjct: 203 YYFDDLQKGVEYQVVDVESNHEFSWMRLKRVGGSDALSDMLANLIQGYKFRYKVDINDIL 262
Query: 117 ----CRAYGR-KITRDREVDAQLVLNDNTKH 142
+ R + + + L D
Sbjct: 263 VAATGLGFERHYLPHLPHLPLYVELKDGQHR 293
>gi|116747784|ref|YP_844471.1| type IV pilus assembly PilZ [Syntrophobacter fumaroxidans MPOB]
gi|116696848|gb|ABK16036.1| type IV pilus assembly PilZ [Syntrophobacter fumaroxidans MPOB]
Length = 121
Score = 38.3 bits (88), Expect = 0.60, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 16/86 (18%)
Query: 116 DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN---- 171
+ R + R A++ D + +V ++S +GV V Q+ + V
Sbjct: 2 NEREFTRVT---LHTTAEVRWGD-EVVTGEVENLSLNGVFVKSSAQVPADTPVEITILLV 57
Query: 172 --------DILGRVVRIFPGGIAIEF 189
I G VVR P G A+ F
Sbjct: 58 GASSELSVRIKGEVVRREPHGFAVRF 83
>gi|134299333|ref|YP_001112829.1| type IV pilus assembly PilZ [Desulfotomaculum reducens MI-1]
gi|134052033|gb|ABO50004.1| type IV pilus assembly PilZ [Desulfotomaculum reducens MI-1]
Length = 98
Score = 38.3 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 10 FIDQRAFQRVKVDLKGRFLLFDGTEY-NCIVREISPGGLCIVCDVPMFLVGERSIVFVEK 68
++R +R +++L+ D N + IS GG+ CD +GE +++
Sbjct: 4 ARERRKHKRYEIELQAIISKNDHRYLQNVKLINISGGGISFTCD-NQIAIGETIMIYFPF 62
Query: 69 VGRIEGKVV 77
+ ++G V+
Sbjct: 63 I-TVQGYVI 70
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 9/97 (9%)
Query: 115 QDCRAYGRKITRDREVDAQLVLNDNTKHS-CKVIDISESGVSVSVDLQIEMFSKVLFN-- 171
++ R + R E+ A + ND+ K+I+IS G+S + D QI + ++
Sbjct: 5 RERRKHKRYE---IELQAIISKNDHRYLQNVKLINISGGGISFTCDNQIAIGETIMIYFP 61
Query: 172 --DILGRVVRIFPGGIAIEFSSVQESNIAFKSLINHC 206
+ G V+ F + + L HC
Sbjct: 62 FITVQGYVIWQQGNRYGAMFQNPLG-DELQIFLTKHC 97
>gi|167584054|ref|ZP_02376442.1| Cellulose synthase (UDP-forming) [Burkholderia ubonensis Bu]
Length = 681
Score = 38.3 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVC-DVPMFLVGERSIV 64
+ R R+ + + LL DGT C + S GGL + G+ V
Sbjct: 527 EAKQVRVTHRIAMRVPATLLLADGTTAACFTSDYSAGGLGLEAVPGLTLATGDTLTV 583
Score = 35.6 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 13/87 (14%)
Query: 129 EVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFSKVLFNDILG--------RVV 178
V A L+L D T +C D S G+ + L + + G RV
Sbjct: 540 RVPATLLLADGTTAACFTSDYSAGGLGLEAVPGLTLATGDTLTVCVTRGDRAFTFPVRVC 599
Query: 179 RIFPGGIAIEFSSV---QESNIAFKSL 202
R+ P + + F ++ QE + +
Sbjct: 600 RVTPAHVGVSFDALTLEQERQLVQCTF 626
>gi|328544376|ref|YP_004304485.1| methyl-accepting chemotaxis sensory transducer [polymorphum gilvum
SL003B-26A1]
gi|326414118|gb|ADZ71181.1| Methyl-accepting chemotaxis sensory transducer [Polymorphum gilvum
SL003B-26A1]
Length = 592
Score = 38.3 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCD-VPMFLVGERSIVFVEKVG 70
D+R R+ V + GR L G R++S G + D +P + + ++++G
Sbjct: 324 DRRVEDRLPVKIGGRLSL-HGRISPVETRDLSHSGALVTGDNLPAPACPVDATLTLDQIG 382
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKL 103
I +V+N N + S+ R + +L
Sbjct: 383 EIGIRVLNASENGLHCQFTRLSDAVRDAVDRRL 415
>gi|330810709|ref|YP_004355171.1| phage host specificity protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327378817|gb|AEA70167.1| Putative phage host specificity protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 1185
Score = 38.3 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 41 EISP--GGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRK 98
IS G + + G+R I+ + GR EG+ V + R V + SE R
Sbjct: 502 RISAVAGRVVTLDRDTQAKAGDRLIINLPG-GRAEGRTVQSVAGRAVTVTVAYSEAPR-- 558
Query: 99 LADKLIWLANKDDLHLQDCR 118
+L W + DDL + R
Sbjct: 559 --AQLQWALDADDLAIPLYR 576
>gi|78066001|ref|YP_368770.1| cellulose synthase (UDP-forming) [Burkholderia sp. 383]
gi|77966746|gb|ABB08126.1| Cellulose synthase (UDP-forming) [Burkholderia sp. 383]
Length = 845
Score = 38.3 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGR- 71
R R+ + + LL DG+ C + S GGL + + VG+ V V + R
Sbjct: 694 RVTHRIAMRVPAMLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAVGDTLTVCVTRGDRS 753
Query: 72 --IEGKVVNFDS 81
+V
Sbjct: 754 FPFPVRVTRVTP 765
Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 14/107 (13%)
Query: 110 DDLHLQDCRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFS 166
L + R R V A L+L D + +C D S G+ + L + +
Sbjct: 682 AALAVARETKQVRVTHRIAMRVPAMLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAVGD 741
Query: 167 KVLFNDILG--------RVVRIFPGGIAIEFSSV---QESNIAFKSL 202
+ G RV R+ P + + F + QE + +
Sbjct: 742 TLTVCVTRGDRSFPFPVRVTRVTPTHVGVSFDELTLEQERQLVQCTF 788
>gi|29833605|ref|NP_828239.1| hypothetical protein SAV_7063 [Streptomyces avermitilis MA-4680]
gi|29610729|dbj|BAC74774.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 477
Score = 38.3 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 30/92 (32%), Gaps = 9/92 (9%)
Query: 70 GRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDRE 129
G +EG V+ + G + + R L A L R R
Sbjct: 243 GALEGTVLRLRAPEGGVITVE-----RPYLPFTPTEFARARALVE----LDARLGPRIPR 293
Query: 130 VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQ 161
L L + + + + D+S+ + ++ +
Sbjct: 294 SHDVLQLPEGSAITVRRADVSDLAAAKAMHER 325
>gi|327478942|gb|AEA82252.1| cellulose synthase catalytic subunit [Pseudomonas stutzeri DSM
4166]
Length = 865
Score = 37.9 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 34/101 (33%), Gaps = 11/101 (10%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIE 73
R RV L L DG Y C + + + GG + + + ++ + + + G
Sbjct: 696 RRAHRVMAQLPASLKLADGHAYPCTLLDFAEGGAGLQIPPGLKVDMDQPVSLILQRG--- 752
Query: 74 GKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHL 114
+R + S +L +L L + L
Sbjct: 753 --------DRSFMFSGQASRQIGERLGIRLDNLDLAQQIDL 785
>gi|15598738|ref|NP_252232.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa PAO1]
gi|107103054|ref|ZP_01366972.1| hypothetical protein PaerPA_01004123 [Pseudomonas aeruginosa PACS2]
gi|116051540|ref|YP_789623.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218890231|ref|YP_002439095.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa LESB58]
gi|254236466|ref|ZP_04929789.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa C3719]
gi|254242245|ref|ZP_04935567.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa 2192]
gi|296387955|ref|ZP_06877430.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa PAb1]
gi|313108887|ref|ZP_07794870.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa 39016]
gi|33514891|sp|Q9HY69|ALG44_PSEAE RecName: Full=Alginate biosynthesis protein Alg44
gi|9949693|gb|AAG06930.1|AE004775_1 alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa PAO1]
gi|115586761|gb|ABJ12776.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126168397|gb|EAZ53908.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa C3719]
gi|126195623|gb|EAZ59686.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa 2192]
gi|218770454|emb|CAW26219.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa LESB58]
gi|310881372|gb|EFQ39966.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa 39016]
Length = 389
Score = 37.9 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 35/90 (38%), Gaps = 10/90 (11%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRI 72
QR F RVK+ + R++ + + + ++S GG G+ ++
Sbjct: 16 QRQFARVKLPARIRYIGANREGVDARLLDLSAGGFAFTASGAPIQPGD---LY------- 65
Query: 73 EGKVVNFDSNRGYAVRIVTSENERRKLADK 102
+GK++ + +++ + + +
Sbjct: 66 KGKLLFQVDSISFSLEVEFQVRSVDPASRR 95
>gi|307726110|ref|YP_003909323.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
sp. CCGE1003]
gi|307586635|gb|ADN60032.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
sp. CCGE1003]
Length = 734
Score = 37.9 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 11/94 (11%)
Query: 117 CRAYGRKITRDREV-DAQLVLNDNTKHSCKVIDISES--GVSVSVDLQIEMFSKVLFN-- 171
R R + R L + +C+ ID SE GV++ +Q+ M +V +
Sbjct: 573 ERRQIRAVHRVAMEMPVMLKFSTGRTLACRTIDYSEGGVGVALPAAIQVPMHERVTVSLF 632
Query: 172 ------DILGRVVRIFPGGIAIEFSSVQESNIAF 199
V PG + + FS++
Sbjct: 633 RGDEEYAFPATVGFTAPGRVGLRFSAMTREQEYE 666
Score = 35.2 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFL-VGERSIVFV 66
RA RV +++ G C + S GG+ + + + + ER V +
Sbjct: 578 RAVHRVAMEMPVMLKFSTGRTLACRTIDYSEGGVGVALPAAIQVPMHERVTVSL 631
>gi|188579785|ref|YP_001923230.1| hypothetical protein Mpop_0517 [Methylobacterium populi BJ001]
gi|179343283|gb|ACB78695.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 144
Score = 37.9 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 99 LADKLIWLANKDDLHLQDC----RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGV 154
LAD L LA D + R R T A + L D T+ C V DIS+SG
Sbjct: 11 LADLLPELAAGDASANHEDPLVARREERTSTN---WIALIRLFDGTEIPCNVKDISKSGA 67
Query: 155 SVSVD 159
+ V
Sbjct: 68 KLGVP 72
>gi|152987431|ref|YP_001346987.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa PA7]
gi|150962589|gb|ABR84614.1| alginate biosynthesis protein Alg44 [Pseudomonas aeruginosa PA7]
Length = 389
Score = 37.9 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 35/90 (38%), Gaps = 10/90 (11%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRI 72
QR F RVK+ + R++ + + + ++S GG G+ ++
Sbjct: 16 QRQFARVKLPARIRYIGANREGVDARLLDLSAGGFAFTASGAPIQPGD---LY------- 65
Query: 73 EGKVVNFDSNRGYAVRIVTSENERRKLADK 102
+GK++ + +++ + + +
Sbjct: 66 KGKLLFQVDSISFSLEVEFQVRSVDPASRR 95
>gi|297568833|ref|YP_003690177.1| response regulator receiver modulated PilZ sensor protein
[Desulfurivibrio alkaliphilus AHT2]
gi|296924748|gb|ADH85558.1| response regulator receiver modulated PilZ sensor protein
[Desulfurivibrio alkaliphilus AHT2]
Length = 258
Score = 37.9 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 23/91 (25%)
Query: 109 KDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSV-SVDLQIEMF-- 165
+ L++ + R R E A L + D S +++DIS +G ++ + +
Sbjct: 120 RSSLNVMNRRREQRY--ALPEHVATLRV-DKKIFSGRLLDISRTGAALGGMKFDPALGLF 176
Query: 166 -----------------SKVLFNDILGRVVR 179
L + + GR+VR
Sbjct: 177 RMAELELKLQDPAGLEQETSLISGLFGRIVR 207
>gi|209522500|ref|ZP_03271092.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
sp. H160]
gi|209497066|gb|EDZ97329.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
sp. H160]
Length = 735
Score = 37.9 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 117 CRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSVD--LQIEMFSKVLFN-- 171
R R + R ++ L + +C+ ID SE GV V++ +++ M +V +
Sbjct: 574 ERRQIRAVPRVAMKMPVMLKFSTGRTLACETIDYSEGGVGVALPGNIEVPMQERVSVSLF 633
Query: 172 ------DILGRVVRIFPGGIAIEFSSVQESNIAF 199
V PG + + FSS+
Sbjct: 634 RGDEEYAFPATVSFAEPGRVGLRFSSMSREQEYE 667
>gi|153824427|ref|ZP_01977094.1| hypothetical protein A5A_1233 [Vibrio cholerae MZO-2]
gi|149741981|gb|EDM56010.1| hypothetical protein A5A_1233 [Vibrio cholerae MZO-2]
Length = 236
Score = 37.9 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFSKVLFN---- 171
R++ R + DN ++ ++D S +G V + + ++ M SKV N
Sbjct: 130 RSHERYKVAIPAEVS----EDNKNYAGTLVDFSITGCGVFIRGENELHMGSKVRINSELD 185
Query: 172 -----DILGRVV--RIFPGG--IAIEFSSVQE-SNIAFKSLINHCY 207
+ +V R G I I+F + K ++ H +
Sbjct: 186 PFLPKRLKSHIVNIRRKSNGHLIGIQFEQPITLTETLKKQVLEHAF 231
>gi|85375285|ref|YP_459347.1| hypothetical protein ELI_12290 [Erythrobacter litoralis HTCC2594]
gi|84788368|gb|ABC64550.1| hypothetical protein ELI_12290 [Erythrobacter litoralis HTCC2594]
Length = 220
Score = 37.9 bits (87), Expect = 0.78, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 61/195 (31%), Gaps = 30/195 (15%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG-- 70
+RA R + L+ L+ EY CIVR++SP G+ + ER I+ G
Sbjct: 19 RRASPRSSLMLRTAKLVCQSGEYVCIVRDVSPEGVGLRFLHAAPT--ERRILLELANGAT 76
Query: 71 -RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDRE 129
+E +V G+ + A + + R
Sbjct: 77 YPVE-RVWAGKQQSGF------------RFAAAIDLHEFIHEPSPYRAR------PIRLR 117
Query: 130 VDAQLVLNDNTKH-SCKVIDISESGVSVSVDLQIEMFS--KVLFNDILGRV--VRIFPGG 184
+ A L + + ++D+S G V + ++ L ++ V G
Sbjct: 118 ISAAASLASGNQAEAAGLVDLSTGGARVESARDYGIGCILRLEVGSQLSKLAEVCWADEG 177
Query: 185 -IAIEFSSVQESNIA 198
+ + F
Sbjct: 178 RLGLSFLQPMTIEEL 192
>gi|326388847|ref|ZP_08210429.1| hypothetical protein Y88_3591 [Novosphingobium nitrogenifigens DSM
19370]
gi|326206447|gb|EGD57282.1| hypothetical protein Y88_3591 [Novosphingobium nitrogenifigens DSM
19370]
Length = 110
Score = 37.9 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVD-LQIEMFSKVLFN----DILGRVVRIFPGGI 185
A++VL C++ID+S++G + V + + + V+ + G VV
Sbjct: 6 PARIVLITG-HFPCQLIDMSQTGACICVPGIPPAIGASVVLEVNGIEAFGTVVWRRASQF 64
Query: 186 AIEFSS 191
++F
Sbjct: 65 GVKFDE 70
Score = 37.9 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 20 KVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNF 79
+++L R +L G + C + ++S G CI +G ++ V + V
Sbjct: 2 RLNLPARIVLITGH-FPCQLIDMSQTGACICVPGIPPAIGASVVLEVNGIEAFGTVVWRR 60
Query: 80 DSNRG 84
S G
Sbjct: 61 ASQFG 65
>gi|242280091|ref|YP_002992220.1| type IV pilus assembly PilZ [Desulfovibrio salexigens DSM 2638]
gi|242122985|gb|ACS80681.1| type IV pilus assembly PilZ [Desulfovibrio salexigens DSM 2638]
Length = 183
Score = 37.9 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 41/113 (36%), Gaps = 15/113 (13%)
Query: 93 ENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISES 152
+ + A++ + + K + R R + V + + C+++DIS
Sbjct: 21 DRMLGRNAEESLDIEFKPQKDIPAARRAFRIDVDNMHVICRT-----PRVKCRILDISAG 75
Query: 153 GVSVSVDLQIEMFSKV----------LFNDILGRVVRIFPGGIAIEFSSVQES 195
G+ + + + V + ++ ++ R P + EF ++ S
Sbjct: 76 GIGFVSSKEFPVGTIVEAVLLWSGKPVLKNVKLKIARRTPKVVGCEFIELERS 128
>gi|206559760|ref|YP_002230524.1| putative cellulose synthase catalytic subunit [Burkholderia
cenocepacia J2315]
gi|198035801|emb|CAR51692.1| putative cellulose synthase catalytic subunit [UDP-forming]
[Burkholderia cenocepacia J2315]
Length = 845
Score = 37.9 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGR- 71
R R+ + + LL DG+ C + S GGL + + VG+ V V + R
Sbjct: 694 RVTHRIAMRVPAMLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAVGDTLTVCVTRGDRA 753
Query: 72 --IEGKVVNFDS 81
+V S
Sbjct: 754 FPFPVRVTRVTS 765
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 14/107 (13%)
Query: 110 DDLHLQDCRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFS 166
L + R R V A L+L D + +C D S G+ + L + +
Sbjct: 682 AALAVARETRQVRVTHRIAMRVPAMLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAVGD 741
Query: 167 KVLFNDILG--------RVVRIFPGGIAIEFSSV---QESNIAFKSL 202
+ G RV R+ + + F + QE + +
Sbjct: 742 TLTVCVTRGDRAFPFPVRVTRVTSTHVGVSFDELTLEQERQLVQCTF 788
>gi|317494481|ref|ZP_07952894.1| cellulose synthase catalytic subunit protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316917411|gb|EFV38757.1| cellulose synthase catalytic subunit protein [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 855
Score = 37.9 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVF 65
+++ R RV++ + DG + C +R+ S GG+ + + + + GE +
Sbjct: 685 SVETKQVRQSHRVEIAMPAAIARKDGHIFPCTLRDYSDGGVGVELREGSVLNDGENITLM 744
Query: 66 VEKVGR----IEGKVVNFD 80
+++ G+ KV
Sbjct: 745 LKR-GQQEYSFPAKVTRVF 762
>gi|158520900|ref|YP_001528770.1| type IV pilus assembly PilZ [Desulfococcus oleovorans Hxd3]
gi|158509726|gb|ABW66693.1| type IV pilus assembly PilZ [Desulfococcus oleovorans Hxd3]
Length = 167
Score = 37.9 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 41/127 (32%), Gaps = 19/127 (14%)
Query: 74 GKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQ 133
GK+ R S + A + D R + RK R +
Sbjct: 43 GKIKKQQPGTSAKPRKAPSAEKPAPAAA-----SKPQAPEATDKRQHPRKPLRLNVSVTR 97
Query: 134 LVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN----------DILGRVVRIFPG 183
++ T + DIS G+ + ++ + + + G+VVR+
Sbjct: 98 GEVS-GTSMA---RDISLGGLFLETIEEMAPGQVLQLSIPFTNQDRQIKVKGKVVRMTED 153
Query: 184 GIAIEFS 190
G+ +EF
Sbjct: 154 GVGVEFD 160
>gi|320353629|ref|YP_004194968.1| type IV pilus assembly PilZ [Desulfobulbus propionicus DSM 2032]
gi|320122131|gb|ADW17677.1| type IV pilus assembly PilZ [Desulfobulbus propionicus DSM 2032]
Length = 238
Score = 37.9 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 72/203 (35%), Gaps = 35/203 (17%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+DQ++ +++ ++ RF + D ++ +IS L + +P++ + I ++ V
Sbjct: 27 VDQKSLEKLYTEI--RFCVADLKPGFEVISDISQCNLIYISGLPVYK---KIIDYL--VD 79
Query: 71 RIEGKVVNF--DSNRGYAVRIVTSENERRKLADKLIWLA-----NKDDLHLQDCRAYGRK 123
G++V + N + + S K+ A + L+ R R
Sbjct: 80 NKVGEIVRIIKNDNVSFKQIVNFS----EKIQCYRTLYAEDQQEAEHKLNTLIRRDGIRF 135
Query: 124 ITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQI-EMF-------------SKVL 169
+ D + +++DIS SG SV + + V
Sbjct: 136 TLNSLVLAYT---ADERLGTGELVDISTSGCSVKAPTVPVAVGGVIEMTIRFEQHQTLVS 192
Query: 170 FNDILGRVVRIFPGGIAIEFSSV 192
++VR G A +F V
Sbjct: 193 VFQAKAQIVRADTEGFAAQFMDV 215
>gi|148264011|ref|YP_001230717.1| type IV pilus assembly PilZ [Geobacter uraniireducens Rf4]
gi|146397511|gb|ABQ26144.1| type IV pilus assembly PilZ [Geobacter uraniireducens Rf4]
Length = 93
Score = 37.9 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 15/87 (17%)
Query: 114 LQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN-- 171
L + R + R DA + +D T V ++S GV V+ +I + V
Sbjct: 5 LMERRKFARLA---LHSDASIKHDD-TVIMGVVENLSMKGVFVNTTEKIPLNDSVEVTIY 60
Query: 172 ---------DILGRVVRIFPGGIAIEF 189
D+ VVR+ GI +EF
Sbjct: 61 TYSTPDQLCDLQATVVRVTETGIGLEF 87
>gi|254504114|ref|ZP_05116265.1| Type IV pilus assembly protein PilZ [Labrenzia alexandrii DFL-11]
gi|222440185|gb|EEE46864.1| Type IV pilus assembly protein PilZ [Labrenzia alexandrii DFL-11]
Length = 537
Score = 37.9 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 101 DKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDL 160
DKL+ LA + LQD A R+ R D + ++ ++S +G ++ +
Sbjct: 442 DKLVLLAKAMENELQD--AEARRSPRKDTTAVTQAQVDGRTQTVEIENVSRTGAALKGLI 499
Query: 161 QIEMFSKVLF----NDILGRVVRIFPGGI-AIEF 189
+E V + LG VV G+ I+F
Sbjct: 500 GVEKGMTVSVMIDDQERLGHVV-WTDAGMTGIQF 532
>gi|85709975|ref|ZP_01041040.1| hypothetical protein NAP1_13858 [Erythrobacter sp. NAP1]
gi|85688685|gb|EAQ28689.1| hypothetical protein NAP1_13858 [Erythrobacter sp. NAP1]
Length = 214
Score = 37.9 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 68/206 (33%), Gaps = 24/206 (11%)
Query: 1 MYRGIHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGE 60
M G + RA +R + L+ L+ EY C++R++S G+ + P+
Sbjct: 1 MEHGKQAWSGEEARAAKRASLLLRRAKLVCQSGEYLCLIRDVSSLGVGLGFAHPVPPEKR 60
Query: 61 RSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAY 120
+ + +V GY + E + H
Sbjct: 61 TLLQLSNDLTYPVERVWTGQRQAGYQFGGEITVEE----------FLREQSPH------- 103
Query: 121 GRKITRDREVDAQLVLNDNT-KHSCKVIDISESGVSVSVDLQIEMFSKVL--FNDILGRV 177
+ + + D + +++D+S G V+ ++++ + + + ++
Sbjct: 104 -PSRPLRLNMTGNVRIQDARQRIDARLVDLSCEGAKVASQAELKLGRLITFELDGLPAQL 162
Query: 178 --VRIFPGG-IAIEFSSVQESNIAFK 200
VR G I+F ++ +
Sbjct: 163 AQVRWNENGRYGIQFQHAIDTEELAR 188
>gi|170742647|ref|YP_001771302.1| type IV pilus assembly PilZ [Methylobacterium sp. 4-46]
gi|168196921|gb|ACA18868.1| type IV pilus assembly PilZ [Methylobacterium sp. 4-46]
Length = 118
Score = 37.9 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+RA R+ + GR L GT C+VR IS GG + L E+ ++VE++G
Sbjct: 8 QRRANPRIPTFMGGRIRLPGGTGVTCVVRNISAGGALLDVSNAAVLP-EQVDLWVEQIG 65
>gi|167034194|ref|YP_001669425.1| cellulose synthase catalytic subunit [Pseudomonas putida GB-1]
gi|166860682|gb|ABY99089.1| cellulose synthase catalytic subunit (UDP-forming) [Pseudomonas
putida GB-1]
Length = 869
Score = 37.9 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGR- 71
R RV++ L +L G Y C + + S GG+ + + GE+ + + + R
Sbjct: 696 RRAHRVQMRLPAGLVLASGHAYPCTLVDYSDGGVGLQVQQDLELKPGEQVRLLLNRGQRE 755
Query: 72 --IEGKVVNFD 80
+ V
Sbjct: 756 FAFQACVTRTV 766
>gi|167573351|ref|ZP_02366225.1| glycosyl transferase, group 2 family protein [Burkholderia
oklahomensis C6786]
Length = 641
Score = 37.6 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGERSIVFVE 67
+ R R+ + + L DGT C ++ S GGL + +G+ V V
Sbjct: 487 EAKQVRVTHRIAMRVPATLLFADGTTAACHTKDYSAGGLGLDAVPGARLALGDTLDVCVN 546
Query: 68 KVGR---IEGKVVNFDS 81
+ R +V D
Sbjct: 547 RGDRPFHFPVRVTRVDE 563
>gi|148556869|ref|YP_001264451.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
[Sphingomonas wittichii RW1]
gi|148502059|gb|ABQ70313.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Sphingomonas wittichii RW1]
Length = 887
Score = 37.6 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 123 KITRDREV----DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF----NDIL 174
+TRD V A + + ++ ++S SG + + V +
Sbjct: 793 LVTRDPRVAVLRSATVRSARGVE-PARIRNLSRSGAMIECAIPFRPGEAVTLDLGNGGPV 851
Query: 175 GRVVRIF-PGGIAIEFSSVQESNIA 198
V+R I + F E++
Sbjct: 852 DGVIRWADEDRIGVAFDEPIEADQM 876
>gi|171778090|ref|ZP_02919347.1| hypothetical protein STRINF_00182 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283072|gb|EDT48496.1| hypothetical protein STRINF_00182 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 218
Score = 37.6 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 18/103 (17%)
Query: 111 DLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSV----------DL 160
+ R R + DN + +V DISE+G+S S ++
Sbjct: 8 AIGRPHYRGSERFPVDEPMTIEV----DNDSYQVRVCDISETGISFSSNLPLYLPKTKEI 63
Query: 161 QIEMFSKVLFNDILGRVVRIFPG----GIAIEFSSVQESNIAF 199
+ + S+ G VVR+ G ++F+ V ++I
Sbjct: 64 TLHLQSRDYRARSKGHVVRVVVGEKCWRYGVQFTEVNPADIRE 106
>gi|254415231|ref|ZP_05028993.1| Type IV pilus assembly protein PilZ [Microcoleus chthonoplastes PCC
7420]
gi|196178037|gb|EDX73039.1| Type IV pilus assembly protein PilZ [Microcoleus chthonoplastes PCC
7420]
Length = 1350
Score = 37.6 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 26/201 (12%), Positives = 64/201 (31%), Gaps = 22/201 (10%)
Query: 20 KVDLKGRFLLFDGT--EYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG-----RI 72
V L+ + E S + ++ + G+ + + G ++
Sbjct: 499 NVPLETTCWVACEGNPEIELTTSNFSVNSIRLLHAPTSWRNGQSLTLRCQFPGVSDALQL 558
Query: 73 EGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDA 132
G + + V + T+ ++R L + +A L + D R + A
Sbjct: 559 TGTIA-TKALEWVDVCLDTTSSQRTGLRQSIKHIAQTQGLVVHDLRRQEPRTPLTINCLA 617
Query: 133 QLVLNDNTKHSCKVIDISESGVSV--------SVDLQIEMFSKVLFNDIL----GRVVRI 180
+ L K +IS+ G+ + +D ++ + ++ + G +V
Sbjct: 618 E--LESGEKVPVMTQNISQEGICLKATTANPWQIDQRLLLRLQLPGGETPLWLQGDIVWQ 675
Query: 181 FPGGIAIEFSSVQESNIAFKS 201
F + ++F +
Sbjct: 676 FEDYVGVKFDTTTSQKAKLHR 696
>gi|229522298|ref|ZP_04411714.1| hypothetical protein VIF_002849 [Vibrio cholerae TM 11079-80]
gi|229340283|gb|EEO05289.1| hypothetical protein VIF_002849 [Vibrio cholerae TM 11079-80]
Length = 221
Score = 37.6 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 20/106 (18%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFSKVLFN---- 171
R++ R + DN ++ ++D S SG V + + + M SKV N
Sbjct: 115 RSHERYKVAIPAEVS----EDNKNYAGTLVDFSISGCGVFIRGENGLHMGSKVRINSELD 170
Query: 172 -----DILGRVV--RIFPGG--IAIEFSSVQE-SNIAFKSLINHCY 207
+ +V R G I I+F + K ++ H +
Sbjct: 171 PFLPKRLKSHIVNIRRKSNGHLIGIQFEQPITLTETLKKQVLEHAF 216
>gi|114778691|ref|ZP_01453503.1| hypothetical protein SPV1_13487 [Mariprofundus ferrooxydans PV-1]
gi|114551053|gb|EAU53615.1| hypothetical protein SPV1_13487 [Mariprofundus ferrooxydans PV-1]
Length = 127
Score = 37.6 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 12/88 (13%)
Query: 130 VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFS----KVLFNDIL--------GRV 177
A + L D + ++ID++ G+ + + S + I V
Sbjct: 17 ATASIALQDGSTLEGEIIDLAMHGMFLRSNNPPATGSSCQATIRLGHIRHELSIEAECTV 76
Query: 178 VRIFPGGIAIEFSSVQESNIAFKSLINH 205
V + +A+ F SV+ I H
Sbjct: 77 VHVVGNSVALRFDSVKLEGKGQNQHIEH 104
>gi|13508130|ref|NP_110079.1| branched-chain alpha-keto acid dehydrogenase subunit E2 [Mycoplasma
pneumoniae M129]
gi|2499413|sp|P75392|ODP2_MYCPN RecName: Full=Dihydrolipoyllysine-residue acetyltransferase
component of pyruvate dehydrogenase complex; AltName:
Full=Dihydrolipoamide acetyltransferase component of
pyruvate dehydrogenase complex; AltName: Full=E2
gi|1674135|gb|AAB96095.1| dihydrolipoamide acetyltransferase component (E2) [Mycoplasma
pneumoniae M129]
gi|301633700|gb|ADK87254.1| putative dihydrolipoyllysine-residue acetyltransferase component of
pyruvate dehydrogenase complex [Mycoplasma pneumoniae
FH]
Length = 402
Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 126 RDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQ--IEMFSKVLFNDILGRVVRIFPG 183
+R Q+ L D +K + V + G + + EM V ++ RVVR G
Sbjct: 301 ANRARSKQIKLPDLSKGTISVTNFGSLGAAFGTPIIKHPEM-CIVATGNMEERVVR-AEG 358
Query: 184 GIAI 187
G+A+
Sbjct: 359 GVAV 362
>gi|256830668|ref|YP_003159396.1| LuxR family transcriptional regulator [Desulfomicrobium baculatum
DSM 4028]
gi|256579844|gb|ACU90980.1| transcriptional regulator, LuxR family [Desulfomicrobium baculatum
DSM 4028]
Length = 335
Score = 37.6 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 14/91 (15%)
Query: 13 QRAFQRVKVDLKGRFL--LFDGTEYNCIVREISPGGLCIVCDVPMFLVGE-RSIVFVEKV 69
+R +R + + + + D ++ IS GG+ E I+ ++
Sbjct: 12 RRRIERFSMSIPSKVSSIMHDYSDQELATTNISAGGVFFETGQTYPAGTEVTLIISLDFG 71
Query: 70 G----------RIEGKVVNFDSNRGYAVRIV 90
G R+EG VV DSN G A+
Sbjct: 72 GIKASQPQSRFRVEGTVVRTDSN-GMAIAFD 101
>gi|77457185|ref|YP_346690.1| alginate biosynthesis protein Alg44 [Pseudomonas fluorescens
Pf0-1]
gi|77381188|gb|ABA72701.1| putative alginate biosynthesis-related protein [Pseudomonas
fluorescens Pf0-1]
Length = 389
Score = 37.6 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGE----RSIVFVEK 68
QR RVK+ K RF D T V ++S GGL VGE R ++
Sbjct: 16 QRQHARVKIPAKLRFFGPDRTPVEARVLDLSAGGLAFNAGQLPLTVGEVYKARLQFVIDN 75
Query: 69 VG 70
+G
Sbjct: 76 LG 77
>gi|134295465|ref|YP_001119200.1| cellulose synthase [Burkholderia vietnamiensis G4]
gi|134138622|gb|ABO54365.1| Cellulose synthase (UDP-forming) [Burkholderia vietnamiensis G4]
Length = 845
Score = 37.6 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVC-DVPMFLVGERSIVFVEKVGR- 71
R R+ + + LL DGT C + S GGL + VG+ V V + R
Sbjct: 694 RVTHRIAMRVPATLLLADGTTAACFTSDYSTGGLGLEAVPGLSLAVGDMLTVCVTRGDRP 753
Query: 72 --IEGKVVNFDS 81
+V
Sbjct: 754 FPFPVRVSRVTP 765
Score = 35.2 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 14/107 (13%)
Query: 110 DDLHLQDCRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSV--DLQIEMFS 166
L + R R V A L+L D T +C D S G+ + L + +
Sbjct: 682 AALAVARETKQVRVTHRIAMRVPATLLLADGTTAACFTSDYSTGGLGLEAVPGLSLAVGD 741
Query: 167 KVLFNDILG--------RVVRIFPGGIAIEFSSV---QESNIAFKSL 202
+ G RV R+ P + + F ++ QE + +
Sbjct: 742 MLTVCVTRGDRPFPFPVRVSRVTPTHVGVSFDALTLEQERQLVQCTF 788
>gi|194291395|ref|YP_002007302.1| glycosyltransferase [Cupriavidus taiwanensis LMG 19424]
gi|193225299|emb|CAQ71241.1| glycosyl transferase; similar to bcsA, catalytic unit (UDP-forming)
of cellulose synthase [Cupriavidus taiwanensis LMG
19424]
Length = 653
Score = 37.6 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 3/91 (3%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGRI 72
R +R L DG EY R++S G+ + + G +++ + G I
Sbjct: 537 RKEERFPHHAAA-LLRVDGREYRVTTRDLSCNGVAVTTPLAPAFRPGMEGELWLAQTGWI 595
Query: 73 EGKVVNFDSNRGYAVRIVTSENERRKLADKL 103
+VV + + + R L L
Sbjct: 596 PCRVVR-RDGQLLGIALHAGMAARHALIRLL 625
Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 29/83 (34%), Gaps = 13/83 (15%)
Query: 114 LQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF--- 170
L R R A L+ D ++ D+S +GV+V+ L +
Sbjct: 533 LPRPRKEERF----PHHAAALLRVDGREYRVTTRDLSCNGVAVTTPLAPAFRPGMEGELW 588
Query: 171 ----NDILGRVVRIFPG--GIAI 187
I RVVR GIA+
Sbjct: 589 LAQTGWIPCRVVRRDGQLLGIAL 611
>gi|324007313|gb|EGB76532.1| cellulose synthase catalytic subunit [Escherichia coli MS 57-2]
Length = 872
Score = 37.6 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V SN
Sbjct: 749 LKR-GQQEYVFPAQVARVMSNE 769
>gi|289207423|ref|YP_003459489.1| type IV pilus assembly PilZ [Thioalkalivibrio sp. K90mix]
gi|288943054|gb|ADC70753.1| type IV pilus assembly PilZ [Thioalkalivibrio sp. K90mix]
Length = 103
Score = 37.6 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 25/98 (25%)
Query: 116 DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN---- 171
+ R + R V+ +D ++ DIS G ++ + + + VL
Sbjct: 4 ERRRHPRIP---MTVEVVAECSDGSQVRLTTNDISGGGAFLAWEDRDQSGIDVLKGLGPG 60
Query: 172 ------------------DILGRVVRIFPGGIAIEFSS 191
+ +VVR+ G+A++F S
Sbjct: 61 DQFMLQVFGLLGDGGEPPRVQAQVVRVMEDGVAVQFDS 98
>gi|297569587|ref|YP_003690931.1| response regulator receiver modulated PilZ sensor protein
[Desulfurivibrio alkaliphilus AHT2]
gi|296925502|gb|ADH86312.1| response regulator receiver modulated PilZ sensor protein
[Desulfurivibrio alkaliphilus AHT2]
Length = 257
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 23/91 (25%)
Query: 109 KDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVD-LQIEMF-- 165
+ L++ R R A++ L + +++D+S +G + + + +
Sbjct: 120 RSSLNVLCQRQAKRY--ALPAHVAEIHLK-GKRIPGRLLDLSRTGAAFAGEKFDPNLGLF 176
Query: 166 -----------------SKVLFNDILGRVVR 179
VL + + GR+VR
Sbjct: 177 KPCELDLRLRDPDGLERDTVLISGLTGRIVR 207
>gi|158320536|ref|YP_001513043.1| type IV pilus assembly PilZ [Alkaliphilus oremlandii OhILAs]
gi|158140735|gb|ABW19047.1| type IV pilus assembly PilZ [Alkaliphilus oremlandii OhILAs]
Length = 218
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGT-----EYNCIVREISPGGLCIVCDVPMFLVGER 61
+++ I +R + R+ + L +L EY+C+ +++S GG+ ++C + + E
Sbjct: 97 SIERIQRRNYYRLPIVLP--CVLKKQENDKVVEYSCVSKDLSGGGIKLICKQEI-NLDEN 153
Query: 62 SIVFV----EKVGRIEGKVVNF---DSNRGYAVRIVT 91
+V + E++ I+GKV+ + Y + +
Sbjct: 154 IVVTIKIHEEQMIAIKGKVIRVVKGFEDNSYEISVEF 190
>gi|154249077|ref|YP_001409902.1| type IV pilus assembly PilZ [Fervidobacterium nodosum Rt17-B1]
gi|154153013|gb|ABS60245.1| type IV pilus assembly PilZ [Fervidobacterium nodosum Rt17-B1]
Length = 228
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 8 LQFIDQRAFQRVKVDLKGRFLL---FDGTEYNCIVREISPGGLCIVC 51
++ ++R F R+ + L GRF L + + R +S GGL +V
Sbjct: 104 VRKTEKRKFVRIPLYLDGRFYLSTEPEAESFVFTTRNVSAGGLLMVT 150
>gi|39996294|ref|NP_952245.1| hypothetical protein GSU1192 [Geobacter sulfurreducens PCA]
gi|39983174|gb|AAR34568.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
gi|298505304|gb|ADI84027.1| PilZ domain protein [Geobacter sulfurreducens KN400]
Length = 124
Score = 37.2 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 120 YGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVD-LQIEMFSKVLFN------- 171
R+ TR + +V + + + +V D+S +G+ V + + +V
Sbjct: 2 DKRRFTRVPFAISAMVTHGESSFTGEVADLSLNGMFVKTGGEKPAIGEEVEVVISLSEGE 61
Query: 172 -----DILGRVVRIFPGGIAIEFSSVQ 193
++ G VVR G+A+ FS ++
Sbjct: 62 PSLNVELAGEVVRADANGVALRFSRIE 88
>gi|262403777|ref|ZP_06080335.1| hypothetical protein VOA_001766 [Vibrio sp. RC586]
gi|262350281|gb|EEY99416.1| hypothetical protein VOA_001766 [Vibrio sp. RC586]
Length = 221
Score = 37.2 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 20/106 (18%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEM--FSKVLFND--- 172
R++ R +N +S +ID S SG V +D + E+ SKV N
Sbjct: 115 RSHERYKIAIPAELN----ENNRSYSGTLIDFSISGCGVFIDGENELNKGSKVRINSELD 170
Query: 173 --ILGRV------VRIFPGG--IAIEFSSVQE-SNIAFKSLINHCY 207
+ R+ +R G I I+F + K ++ +
Sbjct: 171 PFLPKRIKSQIVNIRRQSNGHLIGIQFDQPITLTETLKKQVLEQAF 216
>gi|261819442|ref|YP_003257548.1| cellulose synthase catalytic subunit [Pectobacterium wasabiae
WPP163]
gi|261603455|gb|ACX85941.1| cellulose synthase catalytic subunit (UDP-forming) [Pectobacterium
wasabiae WPP163]
Length = 899
Score = 37.2 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 13/105 (12%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVF 65
++ R RV++ + L DG + C++R+ S GG+ + VG+ +
Sbjct: 689 AVEAKQVRQAHRVEMSMSAAILRTDGHIFPCVLRDYSDGGVGVETRESGILQVGDSVSLL 748
Query: 66 VEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKD 110
+++ + YA + K+ ++ L +
Sbjct: 749 LKR------------GQQEYAFPFSVTRAFDNKIGLRMTNLTTRQ 781
>gi|239906453|ref|YP_002953194.1| hypothetical protein DMR_18170 [Desulfovibrio magneticus RS-1]
gi|239796319|dbj|BAH75308.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 125
Score = 37.2 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 9/67 (13%)
Query: 138 DNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF---------NDILGRVVRIFPGGIAIE 188
D K ++S G + ++ + VVR G+AI+
Sbjct: 22 DGEKIPVSTQNLSLKGALFCPEPRLAPGRDCTVVFELAKDIKVRLKATVVRSNDEGVAID 81
Query: 189 FSSVQES 195
F S+ ES
Sbjct: 82 FDSMDES 88
>gi|322420595|ref|YP_004199818.1| type IV pilus assembly PilZ [Geobacter sp. M18]
gi|320126982|gb|ADW14542.1| type IV pilus assembly PilZ [Geobacter sp. M18]
Length = 90
Score = 37.2 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 17/87 (19%)
Query: 115 QDCRAYGRKITRDREVDAQLVLNDN-TKHSCKVIDISESGVSVSVDLQIEMFSKVLFN-- 171
Q+ R + R + A++ L +V ++S GV V+ ++E+ V
Sbjct: 3 QEKRNFARLA-----LHAKVNLQQGERTIEGEVENLSMKGVFVTAARKLEINDTVAVTIF 57
Query: 172 ---------DILGRVVRIFPGGIAIEF 189
D+ +VVR+ G+ ++F
Sbjct: 58 HTLTPQVLCDLKAKVVRVTNQGMGLQF 84
>gi|94263265|ref|ZP_01287081.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93456348|gb|EAT06472.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 124
Score = 37.2 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 16/92 (17%)
Query: 114 LQDCRAYGRKITRDREVDAQLVLNDNTK-HSCKVIDISESGVSV------------SVDL 160
+ + R R + L D H C+ D+S +GVSV +++L
Sbjct: 3 VNERRQSSRVP---FKATISLRFADERHYHRCQTADLSLTGVSVPGVYGHQVGEKCAIEL 59
Query: 161 QIEMFSKVLFNDILGRVVRIFPGGIAIEFSSV 192
+ S L ++ G V+R G+A+ F+++
Sbjct: 60 FLSGGSSDLRLEMQGEVIRAGDDGLALHFTAI 91
>gi|94272431|ref|ZP_01292122.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93450133|gb|EAT01465.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 124
Score = 37.2 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 16/92 (17%)
Query: 114 LQDCRAYGRKITRDREVDAQLVLNDNTK-HSCKVIDISESGVSV----------SVDLQI 162
+ + R R + L D H C+ D+S +GVSV D+++
Sbjct: 3 VNERRQSSRVP---FKATISLRFADERHYHRCQTADLSLTGVSVPGVYGHQVGEKCDIEL 59
Query: 163 EM--FSKVLFNDILGRVVRIFPGGIAIEFSSV 192
+ S L ++ G V+R G+A+ F+++
Sbjct: 60 FLSGGSSDLRLEMQGEVIRAGDDGLALHFTAI 91
>gi|118581237|ref|YP_902487.1| type IV pilus assembly PilZ [Pelobacter propionicus DSM 2379]
gi|118503947|gb|ABL00430.1| type IV pilus assembly PilZ [Pelobacter propionicus DSM 2379]
Length = 92
Score = 37.2 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 14/83 (16%)
Query: 122 RKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIE----MFSK---------- 167
R+ TR D L++ D ++CK+ +IS SGV V D + +
Sbjct: 6 RRGTRVACNDRCLLVFDGNSYTCKLENISISGVLVQCDESFPSQIHLGDRCGLMLCSDPK 65
Query: 168 VLFNDILGRVVRIFPGGIAIEFS 190
V RV R+ +A++F
Sbjct: 66 VCPGQYPARVARLDASKVALQFL 88
>gi|330994080|ref|ZP_08318009.1| Putative cellulose synthase 2 [Gluconacetobacter sp. SXCC-1]
gi|329758817|gb|EGG75332.1| Putative cellulose synthase 2 [Gluconacetobacter sp. SXCC-1]
Length = 1519
Score = 37.2 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 119 AYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF 170
R R R ++ ++ D DIS G V++ L ++ + V
Sbjct: 564 RQIRHKPRVRVKLPVEVCFADGRVFQAHTTDISLGGAGVTMHLPEQIETPVDI 616
>gi|88797764|ref|ZP_01113352.1| hypothetical protein MED297_11450 [Reinekea sp. MED297]
gi|88779441|gb|EAR10628.1| hypothetical protein MED297_11450 [Reinekea sp. MED297]
Length = 86
Score = 37.2 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 12/84 (14%)
Query: 117 CRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVS--VSVDLQIEMFSKVL----- 169
R + E+ + C ++ISESG V+ D Q++ ++
Sbjct: 2 DPRAPRY--KQIEIPLTVTNEAGEHIQCACVNISESGALLHVTQDHQLQKGQRLTARLVK 59
Query: 170 ---FNDILGRVVRIFPGGIAIEFS 190
D+ RV R+ G+ + F
Sbjct: 60 GGHLADVTMRVERLDGDGVGVRFL 83
>gi|320106621|ref|YP_004182211.1| cellulose synthase catalytic subunit [Terriglobus saanensis SP1PR4]
gi|319925142|gb|ADV82217.1| cellulose synthase catalytic subunit (UDP-forming) [Terriglobus
saanensis SP1PR4]
Length = 1504
Score = 37.2 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPM-FLVGERSIVFV---E 67
+R RV + + +L GT + I ++S GG+ + D+PM VGE + +
Sbjct: 588 QRRTTVRVIMQVSAHVMLSSGTSISGITADVSSGGVMMETDMPMNIPVGESVRLVFPVLD 647
Query: 68 KVGRIEGKVVNFDSNR 83
+ +V
Sbjct: 648 GEASLPATIVRATGTE 663
>gi|323949774|gb|EGB45658.1| cellulose synthase catalytic subunit [Escherichia coli H252]
Length = 689
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 506 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 565
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 566 LKR-GQQEYVFPAQVARVMGNE 586
>gi|170732713|ref|YP_001764660.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
cenocepacia MC0-3]
gi|169815955|gb|ACA90538.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
cenocepacia MC0-3]
Length = 845
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGR- 71
R R+ + + LL DG+ C + S GGL + + G+ V V + R
Sbjct: 694 RVTHRIAMRVPAMLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAAGDTLTVCVTRGDRA 753
Query: 72 --IEGKVVNFDS 81
+V
Sbjct: 754 FPFPVRVTRVTP 765
Score = 35.2 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 14/107 (13%)
Query: 110 DDLHLQDCRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEM--FS 166
L + R R V A L+L D + +C D S G+ + + +
Sbjct: 682 AALAVARETKQVRVTHRIAMRVPAMLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAAGD 741
Query: 167 KVLFNDILG--------RVVRIFPGGIAIEFSSV---QESNIAFKSL 202
+ G RV R+ P + + F + QE + +
Sbjct: 742 TLTVCVTRGDRAFPFPVRVTRVTPTHVGVSFEELTLEQERQLVQCTF 788
>gi|134291885|ref|YP_001115654.1| cellulose synthase (UDP-forming) [Burkholderia vietnamiensis G4]
gi|134135074|gb|ABO59399.1| Cellulose synthase (UDP-forming) [Burkholderia vietnamiensis G4]
Length = 733
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 9/71 (12%)
Query: 107 ANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISES--GVSVSVDLQIEM 164
AN+ + R R L + +C+ +D SE GV+V D ++
Sbjct: 567 ANERRQVRESHRVAARI-------PVMLRFGNGRTLACETLDYSEGGIGVAVPEDARVPD 619
Query: 165 FSKVLFNDILG 175
+V + G
Sbjct: 620 GEQVTVSLFRG 630
Score = 34.5 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 5/66 (7%)
Query: 6 HNLQFIDQRAFQRVKVDLKGR--FLL--FDGTEYNCIVREISPGGLCIVCDV-PMFLVGE 60
+ ++R R + R +L +G C + S GG+ + GE
Sbjct: 562 LAVAAANERRQVRESHRVAARIPVMLRFGNGRTLACETLDYSEGGIGVAVPEDARVPDGE 621
Query: 61 RSIVFV 66
+ V +
Sbjct: 622 QVTVSL 627
>gi|218888024|ref|YP_002437345.1| type IV pilus assembly PilZ [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758978|gb|ACL09877.1| type IV pilus assembly PilZ [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 110
Score = 36.8 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 15/97 (15%)
Query: 11 IDQRAFQRVKVDLKGR----FLLFDGTEYNCIVREISPGGLCIVCDV--PMFLVGERSI- 63
+++R R+ + G L DG + + +ISPGG ++ M G R
Sbjct: 1 MERRRHARIFLKAYGLNQSCRLHMDGRDRIAQLIDISPGGSRMLLADGNAMPAQGVRGTL 60
Query: 64 --------VFVEKVGRIEGKVVNFDSNRGYAVRIVTS 92
+++ V V + + V + S
Sbjct: 61 LRGENFQLAYLKDVAYTVAWVSGSEFGASFDVDLDAS 97
>gi|323529614|ref|YP_004231766.1| cellulose synthase catalytic subunit [Burkholderia sp. CCGE1001]
gi|323386616|gb|ADX58706.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
sp. CCGE1001]
Length = 734
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 11/94 (11%)
Query: 117 CRAYGRKITRDREV-DAQLVLNDNTKHSCKVIDISES--GVSVSVDLQIEMFSKVLFN-- 171
R R + R L + +CK ID SE GV++ +Q+ M +V +
Sbjct: 573 ERRQIRAVHRVAMEMPVMLKFSTGRTLACKTIDYSEGGVGVALPAAIQVPMHERVTVSLF 632
Query: 172 ------DILGRVVRIFPGGIAIEFSSVQESNIAF 199
V PG + + FS++
Sbjct: 633 RGDEEYAFPATVGFTAPGRVGLRFSAMTREQEYE 666
>gi|107022458|ref|YP_620785.1| cellulose synthase (UDP-forming) [Burkholderia cenocepacia AU 1054]
gi|116689407|ref|YP_835030.1| cellulose synthase (UDP-forming) [Burkholderia cenocepacia HI2424]
gi|105892647|gb|ABF75812.1| Cellulose synthase (UDP-forming) [Burkholderia cenocepacia AU 1054]
gi|116647496|gb|ABK08137.1| Cellulose synthase (UDP-forming) [Burkholderia cenocepacia HI2424]
Length = 845
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF-LVGERSIVFVEKVGR- 71
R R+ + + LL DG+ C + S GGL + + G+ V V + R
Sbjct: 694 RVTHRIAMRVPAMLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAAGDTLTVCVTRGDRA 753
Query: 72 --IEGKVVNFDS 81
+V
Sbjct: 754 FPFPVRVTRVTP 765
Score = 34.9 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 13/87 (14%)
Query: 129 EVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEM--FSKVLFNDILG--------RVV 178
V A L+L D + +C D S G+ + + + + G RV
Sbjct: 702 RVPAMLLLADGSTAACFTSDYSTGGLGLEAVPGLPLAAGDTLTVCVTRGDRAFPFPVRVT 761
Query: 179 RIFPGGIAIEFSSV---QESNIAFKSL 202
R+ P + + F + QE + +
Sbjct: 762 RVTPTHVGVSFEELTLEQERQLVQCTF 788
>gi|301046602|ref|ZP_07193742.1| cellulose synthase catalytic subunit [Escherichia coli MS 185-1]
gi|300301440|gb|EFJ57825.1| cellulose synthase catalytic subunit [Escherichia coli MS 185-1]
Length = 598
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 415 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 474
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 475 LKR-GQQEYVFPAQVARVMGNE 495
>gi|213421118|ref|ZP_03354184.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 322
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 137 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 193
>gi|209516116|ref|ZP_03264975.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
sp. H160]
gi|209503400|gb|EEA03397.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
sp. H160]
Length = 779
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 53/148 (35%), Gaps = 19/148 (12%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTE-----YNCIVREISPGGLCIVCDVP--MFLVGERSIV 64
+R+ R+ DL + DG C + ++S GG+ ++ + +R
Sbjct: 601 QRRSAPRIPADLAATLHIDDGERGGQAALACRIVDMSAGGVKLLLPGGAQSGPMQDR-SA 659
Query: 65 FVEKVGRIEGKVVNF---------DSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQ 115
+E + G+V + AV ++ L+D+ + L D +
Sbjct: 660 VLEVINPSLGRVSRIAVAVRASFATEDGALAVGAQFTDRGVAGLSDQ-VALVYGDSARWR 718
Query: 116 DCRAYGRKITRDREVDAQLVLNDNTKHS 143
+ RA R LV++ T H+
Sbjct: 719 EFRAS-RNKRIGILRSLALVVSLGTVHA 745
>gi|94497470|ref|ZP_01304040.1| hypothetical protein SKA58_07945 [Sphingomonas sp. SKA58]
gi|94423101|gb|EAT08132.1| hypothetical protein SKA58_07945 [Sphingomonas sp. SKA58]
Length = 122
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 33/95 (34%), Gaps = 7/95 (7%)
Query: 117 CRAYGRKITRDR-EVDAQLVLNDNTKH-SCKVIDISESGVSVSVDLQIEMFSKVL----- 169
R R RD + D ++ ++S +G+ ++ + KV+
Sbjct: 9 DRGPARSSPRDSLFLMTSFFAPDGRSLGRARIRNLSATGLMADCEMPLAAGQKVVLDLRG 68
Query: 170 FNDILGRVVRIFPGGIAIEFSSVQESNIAFKSLIN 204
I G + + + F V + +A K + +
Sbjct: 69 VGRITGNIAWSRDNKVGLAFDDVIDPQLARKPVSS 103
>gi|87200117|ref|YP_497374.1| hypothetical protein Saro_2101 [Novosphingobium aromaticivorans
DSM 12444]
gi|87135798|gb|ABD26540.1| hypothetical protein Saro_2101 [Novosphingobium aromaticivorans
DSM 12444]
Length = 112
Score = 36.8 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 3 RGIHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERS 62
RG L D R R V+L + + IS G + GER
Sbjct: 2 RGGAQLSVTDLRRSTRHPVNLPVIGEHRVHGDVMLHIANISTTGFMAQGVGELGR-GERV 60
Query: 63 IVFVEKVGRIEGKVVNFD-SNRGYAVR 88
V + ++GRIE +V D G+
Sbjct: 61 TVRLPQIGRIEAFLVWTDGDRAGFQFE 87
>gi|146280676|ref|YP_001170829.1| cellulose synthase catalytic subunit [Pseudomonas stutzeri A1501]
gi|145568881|gb|ABP77987.1| cellulose synthase, catalytic subunit [Pseudomonas stutzeri A1501]
Length = 865
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 34/101 (33%), Gaps = 11/101 (10%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIE 73
R RV L L DG Y C + + + GG + + + ++ + + + G
Sbjct: 696 RRAHRVMAQLPASLKLADGHAYPCTLLDFAEGGAGLQIPPGLKVDMDQPVSLILQRG--- 752
Query: 74 GKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHL 114
+R + S +L +L L + L
Sbjct: 753 --------DRSFMFPGQASRQIGERLGIRLDNLDLAQQIDL 785
>gi|329847731|ref|ZP_08262759.1| hypothetical protein ABI_07990 [Asticcacaulis biprosthecum C19]
gi|328842794|gb|EGF92363.1| hypothetical protein ABI_07990 [Asticcacaulis biprosthecum C19]
Length = 169
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 31/91 (34%), Gaps = 21/91 (23%)
Query: 89 IVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDR--EVDAQLVLNDNTKHSCKV 146
+ S+ R A+ + D A R R + A L L+ + C++
Sbjct: 26 LPMSDPHRSSKAEIIT----------PDQYADRRSEPRTHCDDRGALLFLSTHQVVPCRI 75
Query: 147 IDISESGVSVSVDLQIEMFSKVLFNDILGRV 177
+D S SG VS+ D+ +
Sbjct: 76 MDQSASGARVSMA---------AIGDLPAEI 97
>gi|103486870|ref|YP_616431.1| type IV pilus assembly PilZ [Sphingopyxis alaskensis RB2256]
gi|98976947|gb|ABF53098.1| type IV pilus assembly PilZ [Sphingopyxis alaskensis RB2256]
Length = 217
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 18/152 (11%)
Query: 38 IVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERR 97
VR +S G+ + DVP+ VGE + + + G VV D R V+ T+
Sbjct: 56 RVRNMSDRGMMLAADVPI-TVGEALEIALSDTVTLRGAVVWSDGGR-CGVQFDTAV---- 109
Query: 98 KLADKLIWLANKDDLHLQDCRAYGRKITRDR-EVDAQLVLNDNTKHSCKVIDISESGVSV 156
+AD L LA + RA G + R A++V +D T +++D+S+ G
Sbjct: 110 DVADILKQLA-------AEQRAMGYRQPRLPVHTQAEVVADDGTAMRIELVDLSQHGAGF 162
Query: 157 SVDLQIEMFSKVLF----NDILGRVVRIFPGG 184
D E+ ++ +VR G
Sbjct: 163 VHDGHFEVGRELDIVLASGVRRRAIVRWSREG 194
>gi|229588530|ref|YP_002870649.1| putative alginate biosynthesis-like protein [Pseudomonas
fluorescens SBW25]
gi|229360396|emb|CAY47253.1| putative alginate biosynthesis-related protein [Pseudomonas
fluorescens SBW25]
Length = 388
Score = 36.8 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRI 72
QR RVK+ K RF D T+ V ++S GGL P+ +GE GR+
Sbjct: 16 QRQHARVKIPAKLRFFNTDRTQTEARVIDLSAGGLAFTATQPL-TIGEV------HKGRL 68
Query: 73 EGKVVNFDSNRGYAVRIVTSENERRK 98
+ + N G A+ + +
Sbjct: 69 QFVI----DNLGLAMDVELQIRSYDR 90
>gi|75675659|ref|YP_318080.1| hypothetical protein Nwi_1467 [Nitrobacter winogradskyi Nb-255]
gi|74420529|gb|ABA04728.1| hypothetical protein Nwi_1467 [Nitrobacter winogradskyi Nb-255]
Length = 98
Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 10/84 (11%)
Query: 115 QDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDIL 174
+D R + R + + C+++++S G ++ V +
Sbjct: 6 EDRRKHPRVEIDEPAYISM----GGFSMRCRLLNVSPEGAALEVPNPASVPLSFQLMTEK 61
Query: 175 GRVVR------IFPGGIAIEFSSV 192
RV+R I + F
Sbjct: 62 DRVIRGCRVIWTKQNRIGVAFDQP 85
>gi|198425729|ref|XP_002124554.1| PREDICTED: similar to titin [Ciona intestinalis]
Length = 11310
Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 18/139 (12%)
Query: 31 DGTEYNCIVREISPGG-LCIVC-DVPMFLV----GERSIVFVEKVGRIEGKVVNFDSNRG 84
D T++ + +S C VP V E + F+E++ I V +
Sbjct: 1682 DDTKHRLKIVGLSQDDKATFKCKAVPNPDVITTCKEDRVRFIEELEAINCTVKDTV---- 1737
Query: 85 YAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRK-ITRDREVDAQLVLNDNTKHS 143
+ S+ + K+ W+ L + + R R V + L D++ ++
Sbjct: 1738 -VLECELSDPK-----AKVTWMKGNKPLEIDNDRFQALSDGARRSLVLRDVTLADSSAYT 1791
Query: 144 CKVIDISESGVSVSVDLQI 162
CKV D+ S + V+ Q
Sbjct: 1792 CKVADV-FSTAEIFVEEQP 1809
>gi|94271446|ref|ZP_01291959.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93450443|gb|EAT01629.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 124
Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 16/92 (17%)
Query: 114 LQDCRAYGRKITRDREVDAQLVLNDNTK-HSCKVIDISESGVSV----------SVDLQI 162
+ + R R + L D H C+ D+S +GVSV D+++
Sbjct: 3 VNERRQSSRVP---FKATISLRFADERHYHRCQTADLSLTGVSVPGVYGHQVGEKCDIEL 59
Query: 163 EM--FSKVLFNDILGRVVRIFPGGIAIEFSSV 192
+ S L ++ G V+R G+A+ F+++
Sbjct: 60 FLSGGSSDLRLEMRGEVIRAGDDGLALHFTAI 91
>gi|56460180|ref|YP_155461.1| glycosyltransferase [Idiomarina loihiensis L2TR]
gi|56179190|gb|AAV81912.1| Predicted glycosyltransferase [Idiomarina loihiensis L2TR]
Length = 637
Score = 36.8 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVG---ERSIVFVEKV 69
QR QR+ + L DG E++ + +IS GL + L G R V+ +
Sbjct: 141 QRCEQRINLVSAVTMELADGQEFSAMTVDISNNGLQLKLGFDPQLTGLKYARVKVYFSGL 200
>gi|117925217|ref|YP_865834.1| type IV pilus assembly PilZ [Magnetococcus sp. MC-1]
gi|117608973|gb|ABK44428.1| type IV pilus assembly PilZ [Magnetococcus sp. MC-1]
Length = 118
Score = 36.8 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 32/100 (32%), Gaps = 21/100 (21%)
Query: 121 GRKITRDREVDAQLVLN-DNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN-------- 171
R+ R V + D T ++ D+S SG + Q+ +K+
Sbjct: 16 ARQEERKPFVTELIFYASDGTVYTGHTTDVSLSGAFLHT--QLPEHAKLSSGDEGVVELT 73
Query: 172 ----------DILGRVVRIFPGGIAIEFSSVQESNIAFKS 201
+V RI P GI + F V E A
Sbjct: 74 LEKAGNRYTMSFPCKVARITPAGIGLFFDEVDEEGDALDH 113
>gi|323698632|ref|ZP_08110544.1| type IV pilus assembly PilZ [Desulfovibrio sp. ND132]
gi|323458564|gb|EGB14429.1| type IV pilus assembly PilZ [Desulfovibrio desulfuricans ND132]
Length = 170
Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 12 DQRAFQRVKVDLKG----RFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERS 62
D+R + RV V + +F + Y +V ++S GGL I +GER
Sbjct: 56 DRRKYPRVDVSIPAISCVKFSDREMRSYPVMVDDVSEGGLRISFKDVSPDMGERL 110
>gi|213857342|ref|ZP_03384313.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 507
Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 322 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 378
>gi|289824312|ref|ZP_06543905.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
Length = 841
Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|116734839|ref|NP_001069414.1| cell adhesion molecule 3 [Bos taurus]
gi|109658443|gb|AAI18156.1| Cell adhesion molecule 3 [Bos taurus]
gi|296489872|gb|DAA31985.1| cell adhesion molecule 3 [Bos taurus]
Length = 396
Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 18/141 (12%)
Query: 29 LFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVR 88
L D EY C + + P + + + I G + +
Sbjct: 100 LADEGEYTCSIFTM-PVRTAKSLVTVLGIPQKPIIS---------GYKSSLREKDKTTLS 149
Query: 89 IVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVL-----NDNTKHS 143
+S ++ A +L W +LH + R + V + + +D
Sbjct: 150 CQSSGSKP---AAQLTWRKGDQELHGESTRIQEDPNGKTFTVSSSVTFQVTREDDGADIV 206
Query: 144 CKVIDISESGVSVSVDLQIEM 164
C V S G S +IE+
Sbjct: 207 CSVNHESLKGADRSTAQRIEV 227
>gi|253996025|ref|YP_003048089.1| type IV pilus assembly PilZ [Methylotenera mobilis JLW8]
gi|253982704|gb|ACT47562.1| type IV pilus assembly PilZ [Methylotenera mobilis JLW8]
Length = 129
Score = 36.4 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 29/91 (31%), Gaps = 19/91 (20%)
Query: 116 DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFS--------- 166
+ R Y R +L D H+ ++DIS G V D + S
Sbjct: 5 ESRHYSRIQFNAAVELNIRLLED--IHTAHLLDISLKGALVETDT--PISSFIQMRSCLM 60
Query: 167 KVLFND------ILGRVVRIFPGGIAIEFSS 191
+ + + G+VV + +E
Sbjct: 61 TLTLGNNGEKITMQGKVVHHAGRLVGLEALH 91
>gi|327480595|gb|AEA83905.1| glutathione S-transferase domain-containing protein [Pseudomonas
stutzeri DSM 4166]
Length = 334
Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 11/116 (9%)
Query: 4 GIHNLQFIDQRAFQRVKVDLKGRFLLFD--GTEYNCIVREISPGGLCIVCDVPMFLVGER 61
+ +L+F+ QR + R D GR + E CIV S + I+ + G R
Sbjct: 106 ALDDLEFLHQR-YTRDDSDYSGRVTVPVLWDRERQCIVNNESAEIIRILNTAFDGITGSR 164
Query: 62 SIVFVEKV-GRIEGKVVNFDS-------NRGYAVRIVTSENERRKLADKLIWLANK 109
+ E + G I+ G+A E +L +L W+ +
Sbjct: 165 LDFYPEPLRGEIDALNARIYPAINNGVYRAGFATTQDAYEEAFDELFRELDWVERR 220
>gi|28194043|gb|AAO33378.1|AF466300_1 cellulose synthase CelA [Salmonella enterica subsp. enterica
serovar Typhimurium]
Length = 874
Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|226943228|ref|YP_002798301.1| alginate biosynthesis protein Alg44 [Azotobacter vinelandii DJ]
gi|226718155|gb|ACO77326.1| alginate biosynthesis protein Alg44 [Azotobacter vinelandii DJ]
Length = 388
Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGE----RSIVFVEK 68
QR RVK+ K RFL + + +IS GG P+ G + + ++
Sbjct: 17 QRQHARVKLPGKIRFLGPNRETIEQRLIDISAGGFSFASGKPVTQQGAFHRGKLLFQLDS 76
Query: 69 VG---RIEGKVVNFDSNRG 84
+G +E +V N D G
Sbjct: 77 LGLAMDVEFQVRNLDPESG 95
>gi|204928656|ref|ZP_03219855.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|204322089|gb|EDZ07287.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
Length = 874
Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|168235221|ref|ZP_02660279.1| cellulose synthase catalytic subunit (UDP-forming) [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|194738156|ref|YP_002116556.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194713658|gb|ACF92879.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197291416|gb|EDY30768.1| cellulose synthase catalytic subunit (UDP-forming) [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
Length = 874
Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|325526399|gb|EGD03994.1| cellulose synthase (UDP-forming) [Burkholderia sp. TJI49]
Length = 460
Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 44/134 (32%), Gaps = 21/134 (15%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFL-VGERSIVFV----EK 68
R RV+ + +G C R+ S GG+ ++ + + +GE V + ++
Sbjct: 302 RVAHRVEASIPVMLRFANGRTLACETRDYSEGGIGVIVPDDVGIPLGEAVTVSLFTGVDE 361
Query: 69 V---GRIE----GKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDC---- 117
G IE G+V N + + + W A +
Sbjct: 362 YAFPGTIEYVERGRVGMRFDNLSQRQEFELVSSTFARADAWIDWGAGRRPDSPPRAFLHV 421
Query: 118 -----RAYGRKITR 126
R + R ++R
Sbjct: 422 LQVSLRGFRRFVSR 435
>gi|332188431|ref|ZP_08390155.1| pilZ domain protein [Sphingomonas sp. S17]
gi|332011577|gb|EGI53658.1| pilZ domain protein [Sphingomonas sp. S17]
Length = 196
Score = 36.4 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 69/199 (34%), Gaps = 22/199 (11%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+++RA +R L L D C+V IS GL V + VGE + V +
Sbjct: 12 LERRAGKRHSAVLLLGKLCGDRPG-VCLVHNISATGLMARF-VDVPSVGESICIEVRGLP 69
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREV 130
+ G V + + S ++ LH + R + +
Sbjct: 70 PVRGTV-RWVRGAKAGIEFD-SPQPYERI-----------FLHENEDETIPRPPRFEISL 116
Query: 131 DAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMF--SKVLFNDI----LGRVVRIFPGG 184
A + + D K + +++DIS G + D ++ + +++ + G + +
Sbjct: 117 AADVRVGD-RKFAAEMLDISAGGAKLRADSEVVVGLAGQIIVRPMGTAIFGTICWVRDDR 175
Query: 185 IAIEFSSVQESNIAFKSLI 203
F S + ++
Sbjct: 176 FGFRFVSPLPIDTLAAIVV 194
>gi|312968142|ref|ZP_07782352.1| cellulose synthase catalytic subunit [UDP-forming] [Escherichia
coli 2362-75]
gi|312286967|gb|EFR14877.1| cellulose synthase catalytic subunit [UDP-forming] [Escherichia
coli 2362-75]
Length = 872
Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 749 LKR-GQQEYVFPAQVARVMGNE 769
>gi|215488810|ref|YP_002331241.1| cellulose synthase catalytic subunit [Escherichia coli O127:H6 str.
E2348/69]
gi|215266882|emb|CAS11323.1| cellulose synthase, catalytic subunit [Escherichia coli O127:H6
str. E2348/69]
Length = 872
Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 749 LKR-GQQEYVFPAQVARVMGNE 769
>gi|27381816|ref|NP_773345.1| cellulose synthase catalytic subunit protein [Bradyrhizobium
japonicum USDA 110]
gi|27354985|dbj|BAC51970.1| bll6705 [Bradyrhizobium japonicum USDA 110]
Length = 730
Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 13/96 (13%)
Query: 117 CRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQ---IEMFSKVL---- 169
RA R D + ++ S +V ++S SG V + +
Sbjct: 539 GRAEERF---DVDESVLILTGTGEVLSGRVSNVSLSGAGVLLGAGIDCPRAGEPLRVHIA 595
Query: 170 -FNDILGRVVRIFPGGIAIEFSSVQ--ESNIAFKSL 202
I V++ + ++F Q E ++ + L
Sbjct: 596 QVGWIDAMVMQQRGHLVGLQFHLPQSLERDLLIRKL 631
>gi|90019962|ref|YP_525789.1| HAD family hydrolase [Saccharophagus degradans 2-40]
gi|89949562|gb|ABD79577.1| type IV pilus assembly PilZ [Saccharophagus degradans 2-40]
Length = 88
Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVC-DVPMFLVGERSIVFVEKVGR 71
+R R+ + + + D E ++IS GGL I+ M +G G+
Sbjct: 4 RREHPRIPMTVNIKITHPDIGEKVIKTKDISDGGLFILAEPTAMPPIGSIVT------GQ 57
Query: 72 IEGKV 76
++G +
Sbjct: 58 VQGII 62
>gi|27365091|ref|NP_760619.1| hypothetical protein VV1_1731 [Vibrio vulnificus CMCP6]
gi|320155474|ref|YP_004187853.1| hypothetical protein VVM_01250 [Vibrio vulnificus MO6-24/O]
gi|27361237|gb|AAO10146.1| hypothetical protein VV1_1731 [Vibrio vulnificus CMCP6]
gi|319930786|gb|ADV85650.1| hypothetical protein VVMO6_00628 [Vibrio vulnificus MO6-24/O]
Length = 782
Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 22/111 (19%)
Query: 117 CRAYGRKITRDRE-VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFS--------- 166
RK R R L D K ID+S+ G+S+++D +E+ S
Sbjct: 466 DAQSRRKEPRYRFQSPLTLTKADGLAMRGKTIDLSKRGLSLTLDAPLELVSSEEIEINLH 525
Query: 167 -------KVLFNDILGRVVRIFPGGIAIEFSSVQESNIA-----FKSLINH 205
K+ + I RVVR+ P ++ + S F S+I H
Sbjct: 526 ELQLYDKKLPLDKIPYRVVRVSPDNKQVQLVIDENSQTMKTIAFFNSIIEH 576
>gi|37680857|ref|NP_935466.1| hypothetical protein VV2673 [Vibrio vulnificus YJ016]
gi|37199606|dbj|BAC95437.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 782
Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 22/111 (19%)
Query: 117 CRAYGRKITRDRE-VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFS--------- 166
RK R R L D K ID+S+ G+S+++D +E+ S
Sbjct: 466 DAQSRRKEPRYRFQSPLTLTKADGLAMRGKTIDLSKRGLSLTLDAPLELVSSEEIEINLH 525
Query: 167 -------KVLFNDILGRVVRIFPGGIAIEFSSVQESNIA-----FKSLINH 205
K+ + I RVVR+ P ++ + S F S+I H
Sbjct: 526 ELQLYDKKLPLDKIPYRVVRVSPDNKQVQLVIDENSQTMKTIAFFNSIIEH 576
>gi|224370796|ref|YP_002604960.1| hypothetical protein HRM2_37380 [Desulfobacterium autotrophicum
HRM2]
gi|223693513|gb|ACN16796.1| hypothetical protein HRM2_37380 [Desulfobacterium autotrophicum
HRM2]
Length = 93
Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 12/54 (22%)
Query: 148 DISESGVSVSVDLQIEMFSK------VLFN------DILGRVVRIFPGGIAIEF 189
DIS SGV V D +E ++ + + RV R+ G+ I F
Sbjct: 19 DISLSGVFVKTDTLLEPGTQCGVKIFLTGGSERIELSMKARVARVLSSGLGISF 72
>gi|149185137|ref|ZP_01863454.1| hypothetical protein ED21_18827 [Erythrobacter sp. SD-21]
gi|148831248|gb|EDL49682.1| hypothetical protein ED21_18827 [Erythrobacter sp. SD-21]
Length = 213
Score = 36.4 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 58/187 (31%), Gaps = 24/187 (12%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+D+R+ R ++ L+ E+ C++R++S G+ + + +R+I + G
Sbjct: 18 VDRRSKPRYTSLIRAAKLVCGQGEFICVIRDVSATGISLRTFHALP--NDRTIALELQNG 75
Query: 71 RIEGKVVNFDSNRGYAVRIVTSENER-RKLADKLIWLANKDDLHLQDCRAYGRKITRDRE 129
E + G+ +L + W K L R
Sbjct: 76 --ETYEITETRREGFEASYQFDRPVTVERLIYE-TWNFPKRQL---------RLNIAIPL 123
Query: 130 VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFND-----ILGRVVRIFPGG 184
+ L + +++S+ G V D + + +V
Sbjct: 124 TLSSLS-ASGEAVT---VNMSQQGARVECDAAFAIDQALRVAGDHFPETRAKVRWRKDAN 179
Query: 185 IAIEFSS 191
+ F +
Sbjct: 180 YGLVFDN 186
>gi|323975058|gb|EGB70167.1| cellulose synthase catalytic subunit [Escherichia coli TW10509]
Length = 872
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 749 LKR-GQQEYVFPAQVARVMGNE 769
>gi|281180571|dbj|BAI56901.1| putative cellulose synthase [Escherichia coli SE15]
Length = 872
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 749 LKR-GQQEYVFPAQVARVMGNE 769
>gi|224585415|ref|YP_002639214.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|224469943|gb|ACN47773.1| putative polysaccharide biosynthesis protein catalytic subunit
[Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
Length = 874
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|213051457|ref|ZP_03344335.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
Length = 276
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 91 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 147
>gi|168818558|ref|ZP_02830558.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|238910353|ref|ZP_04654190.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|205344508|gb|EDZ31272.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320088040|emb|CBY97802.1| putative cellulose synthase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 874
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|194445847|ref|YP_002042866.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194404510|gb|ACF64732.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
Length = 874
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|168241782|ref|ZP_02666714.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168465091|ref|ZP_02698983.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194447581|ref|YP_002047647.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|200387110|ref|ZP_03213722.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|194405885|gb|ACF66104.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|195632312|gb|EDX50796.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|199604208|gb|EDZ02753.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205338682|gb|EDZ25446.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
Length = 874
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|197251775|ref|YP_002148547.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197215478|gb|ACH52875.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|322613988|gb|EFY10924.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322617880|gb|EFY14773.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625505|gb|EFY22331.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629970|gb|EFY26743.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632141|gb|EFY28892.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636509|gb|EFY33216.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643143|gb|EFY39717.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644636|gb|EFY41172.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322651340|gb|EFY47724.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322652744|gb|EFY49083.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322659045|gb|EFY55297.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663253|gb|EFY59457.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322668739|gb|EFY64892.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674457|gb|EFY70550.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678336|gb|EFY74397.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682406|gb|EFY78427.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322684120|gb|EFY80126.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192324|gb|EFZ77556.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323196248|gb|EFZ81400.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323201396|gb|EFZ86462.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206494|gb|EFZ91455.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323212086|gb|EFZ96913.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216991|gb|EGA01714.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323220356|gb|EGA04810.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224403|gb|EGA08692.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323228333|gb|EGA12464.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233400|gb|EGA17493.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237139|gb|EGA21206.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323243646|gb|EGA27662.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246110|gb|EGA30097.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250890|gb|EGA34768.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257617|gb|EGA41303.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323261824|gb|EGA45391.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266119|gb|EGA49610.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323268663|gb|EGA52130.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 874
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|168232455|ref|ZP_02657513.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|194472939|ref|ZP_03078923.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194459303|gb|EDX48142.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205333232|gb|EDZ19996.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
Length = 874
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|198245795|ref|YP_002217579.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|207858857|ref|YP_002245508.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|197940311|gb|ACH77644.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|206710660|emb|CAR35018.1| cellulose biosynthesis protein catalytic subunit [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|326625362|gb|EGE31707.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
Length = 874
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|167549153|ref|ZP_02342912.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205325840|gb|EDZ13679.1| cellulose synthase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
Length = 874
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|161616679|ref|YP_001590644.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161366043|gb|ABX69811.1| hypothetical protein SPAB_04496 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 874
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|161505838|ref|YP_001572950.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867185|gb|ABX23808.1| hypothetical protein SARI_04015 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 874
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|149185489|ref|ZP_01863805.1| DNA-binding protein, putative [Erythrobacter sp. SD-21]
gi|148830709|gb|EDL49144.1| DNA-binding protein, putative [Erythrobacter sp. SD-21]
Length = 242
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 25/89 (28%), Gaps = 9/89 (10%)
Query: 117 CRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF-----N 171
R R + R Q +++++S +G+ V + + +
Sbjct: 23 DRRQPRLVLRLNTGVGQA----GRAFDAEILNLSRNGMLVKTQADLSLDDPLEVVLPFSG 78
Query: 172 DILGRVVRIFPGGIAIEFSSVQESNIAFK 200
+ +VV F+ +
Sbjct: 79 AVGAKVVWGANELYGCSFAKPISEDELEA 107
>gi|16762684|ref|NP_458301.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29144171|ref|NP_807513.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213612343|ref|ZP_03370169.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213650194|ref|ZP_03380247.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|22001539|sp|Q8Z291|BCSA_SALTI RecName: Full=Cellulose synthase catalytic subunit [UDP-forming]
gi|25511932|pir||AB0985 probable polysaccharide biosynthesis protein catalytic chain yhjO
[imported] - Salmonella enterica subsp. enterica serovar
Typhi (strain CT18)
gi|16504990|emb|CAD08006.1| putative polysaccharide biosynthesis protein catalytic subunit
[Salmonella enterica subsp. enterica serovar Typhi]
gi|29139808|gb|AAO71373.1| putative catalytic subunit of a polysaccharide biosynthesis protein
[Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
Length = 874
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|16766905|ref|NP_462520.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|167990844|ref|ZP_02571943.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|197265000|ref|ZP_03165074.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|22001542|sp|Q93IN2|BCSA_SALTY RecName: Full=Cellulose synthase catalytic subunit [UDP-forming]
gi|14626029|emb|CAC44015.1| cellulose synthase cytalytic subunit [Salmonella typhimurium]
gi|16422182|gb|AAL22479.1| glycosyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|19171168|emb|CAC86199.1| putative cellulose synthase catalytic subunit [Salmonella
typhimurium LT2]
gi|197243255|gb|EDY25875.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205330688|gb|EDZ17452.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261248772|emb|CBG26622.1| putative polysaccharide biosynthesis protein catalytic subunit
[Salmonella enterica subsp. enterica serovar Typhimurium
str. D23580]
gi|267995861|gb|ACY90746.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301160158|emb|CBW19678.1| putative polysaccharide biosynthesis protein catalytic subunit
[Salmonella enterica subsp. enterica serovar Typhimurium
str. SL1344]
gi|312914643|dbj|BAJ38617.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321226671|gb|EFX51721.1| Cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323131979|gb|ADX19409.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332990470|gb|AEF09453.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 874
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|330909590|gb|EGH38104.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli AA86]
Length = 872
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 749 LKR-GQQEYVFPAQVARVMGNE 769
>gi|323966052|gb|EGB61492.1| cellulose synthase catalytic subunit [Escherichia coli M863]
gi|327251179|gb|EGE62872.1| cellulose synthase catalytic subunit [Escherichia coli STEC_7v]
Length = 872
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 749 LKR-GQQEYVFPAQVARVMGNE 769
>gi|306816115|ref|ZP_07450253.1| cellulose synthase catalytic subunit [Escherichia coli NC101]
gi|305850511|gb|EFM50968.1| cellulose synthase catalytic subunit [Escherichia coli NC101]
Length = 872
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 749 LKR-GQQEYVFPAQVARVMGNE 769
>gi|110643780|ref|YP_671510.1| cellulose synthase catalytic subunit [Escherichia coli 536]
gi|161486078|ref|NP_756207.2| cellulose synthase catalytic subunit [Escherichia coli CFT073]
gi|162138345|ref|YP_543025.2| cellulose synthase catalytic subunit [Escherichia coli UTI89]
gi|218691817|ref|YP_002400029.1| cellulose synthase catalytic subunit [Escherichia coli ED1a]
gi|227883694|ref|ZP_04001499.1| cellulose synthase catalytic subunit [Escherichia coli 83972]
gi|237703303|ref|ZP_04533784.1| cellulose synthase catalytic subunit [Escherichia sp. 3_2_53FAA]
gi|300971353|ref|ZP_07171422.1| cellulose synthase catalytic subunit [Escherichia coli MS 45-1]
gi|300976753|ref|ZP_07173572.1| cellulose synthase catalytic subunit [Escherichia coli MS 200-1]
gi|110345372|gb|ABG71609.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli 536]
gi|218429381|emb|CAR10342.2| cellulose synthase, catalytic subunit [Escherichia coli ED1a]
gi|226902567|gb|EEH88826.1| cellulose synthase catalytic subunit [Escherichia sp. 3_2_53FAA]
gi|227839274|gb|EEJ49740.1| cellulose synthase catalytic subunit [Escherichia coli 83972]
gi|294490942|gb|ADE89698.1| cellulose synthase (UDP-forming) [Escherichia coli IHE3034]
gi|300308490|gb|EFJ63010.1| cellulose synthase catalytic subunit [Escherichia coli MS 200-1]
gi|300411277|gb|EFJ94815.1| cellulose synthase catalytic subunit [Escherichia coli MS 45-1]
gi|307555636|gb|ADN48411.1| cellulose synthase [Escherichia coli ABU 83972]
gi|307628612|gb|ADN72916.1| cellulose synthase catalytic subunit [Escherichia coli UM146]
gi|315286196|gb|EFU45632.1| cellulose synthase catalytic subunit [Escherichia coli MS 110-3]
gi|315295432|gb|EFU54762.1| cellulose synthase catalytic subunit [Escherichia coli MS 153-1]
gi|315295807|gb|EFU55124.1| cellulose synthase catalytic subunit [Escherichia coli MS 16-3]
gi|320193954|gb|EFW68587.1| Cellulose synthase catalytic subunit [Escherichia coli WV_060327]
gi|323189320|gb|EFZ74603.1| cellulose synthase catalytic subunit [Escherichia coli RN587/1]
gi|323954925|gb|EGB50705.1| cellulose synthase catalytic subunit [Escherichia coli H263]
Length = 872
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 749 LKR-GQQEYVFPAQVARVMGNE 769
>gi|312948092|gb|ADR28919.1| cellulose synthase catalytic subunit [Escherichia coli O83:H1 str.
NRG 857C]
Length = 872
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 749 LKR-GQQEYVFPAQVARVMGNE 769
>gi|222035243|emb|CAP77988.1| Cellulose synthase catalytic subunit [UDP-forming] [Escherichia
coli LF82]
Length = 872
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 749 LKR-GQQEYVFPAQVARVMGNE 769
>gi|170746678|ref|YP_001752938.1| hypothetical protein Mrad2831_0229 [Methylobacterium
radiotolerans JCM 2831]
gi|170653200|gb|ACB22255.1| conserved hypothetical protein [Methylobacterium radiotolerans
JCM 2831]
Length = 83
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIV 50
QR +RV V+L GR + C+V ++S G+ +
Sbjct: 4 QRNARRVSVNLNGRISVAGHPAIPCVVHDMSRWGVRLR 41
>gi|157368397|ref|YP_001476386.1| cellulose synthase catalytic subunit [Serratia proteamaculans 568]
gi|157320161|gb|ABV39258.1| Cellulose synthase (UDP-forming) [Serratia proteamaculans 568]
Length = 867
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF 56
++ R RV++ + DG + C +R+ S GG+ I V
Sbjct: 687 AVEAKQVRQAHRVEIAMPAAIARADGHLFPCTLRDYSDGGVGIEMRVADA 736
>gi|117625816|ref|YP_859139.1| cellulose synthase catalytic subunit [Escherichia coli APEC O1]
gi|331659841|ref|ZP_08360779.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli TA206]
gi|26110596|gb|AAN82781.1|AE016768_199 Cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli CFT073]
gi|91074613|gb|ABE09494.1| UDP-forming cellulose synthase catalytic subunit [Escherichia coli
UTI89]
gi|115514940|gb|ABJ03015.1| putative ATPases involved in chromosome partitioning [Escherichia
coli APEC O1]
gi|331053056|gb|EGI25089.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli TA206]
Length = 888
Score = 36.4 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 705 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 764
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 765 LKR-GQQEYVFPAQVARVMGNE 785
>gi|205354765|ref|YP_002228566.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205274546|emb|CAR39594.1| putative polysaccharide biosynthesis protein catalytic subunit
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|326629906|gb|EGE36249.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 874
Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|149186228|ref|ZP_01864542.1| hypothetical protein ED21_30864 [Erythrobacter sp. SD-21]
gi|148830259|gb|EDL48696.1| hypothetical protein ED21_30864 [Erythrobacter sp. SD-21]
Length = 333
Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Query: 140 TKHSCKVIDISESGV--SVSVDLQIEMFSKVLF-----NDILGRVVRIFPGGIAIEFSSV 192
+ + ++ +IS SG +++ + + + V DI RV +EF
Sbjct: 183 REATARLRNISRSGAMIALADSVDLAVGQDVTLSLANAGDIAARVRWAVDRQFGLEFLED 242
Query: 193 QESNIAFKSL 202
+ ++ K
Sbjct: 243 FDVSLLVKEF 252
>gi|191170310|ref|ZP_03031863.1| cellulose synthase [Escherichia coli F11]
gi|190909118|gb|EDV68704.1| cellulose synthase [Escherichia coli F11]
gi|324014174|gb|EGB83393.1| cellulose synthase catalytic subunit [Escherichia coli MS 60-1]
Length = 872
Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 749 LKR-GQQEYVFPAQVARVMGNE 769
>gi|331649355|ref|ZP_08350441.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli M605]
gi|331041853|gb|EGI13997.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli M605]
Length = 888
Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 705 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 764
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V N
Sbjct: 765 LKR-GQQEYVFPAQVARVMGNE 785
>gi|325284321|ref|YP_004256861.1| hypothetical protein Deipr_2374 [Deinococcus proteolyticus MRP]
gi|324316385|gb|ADY27498.1| hypothetical protein Deipr_2374 [Deinococcus proteolyticus MRP]
Length = 252
Score = 36.4 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Query: 103 LIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQI 162
L LA + HL++ R+Y + QL L + +I+ S + + +
Sbjct: 92 LPELAKRHQGHLREGRSYSLYHPGNTTTPGQLRLPKGRWITA-IIEQSSTHSLLLLGGIP 150
Query: 163 E 163
Sbjct: 151 A 151
>gi|307296118|ref|ZP_07575949.1| glycosyl transferase family 2 [Sphingobium chlorophenolicum L-1]
gi|306878289|gb|EFN09511.1| glycosyl transferase family 2 [Sphingobium chlorophenolicum L-1]
Length = 704
Score = 36.4 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 12/109 (11%)
Query: 103 LIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVD--L 160
++ L L R R R L+ +D DIS SG+ + +D
Sbjct: 520 MLLLVAMMCLEKPRVRGEERFALRQ---GVTLLGSDGQMIRSDRGDISISGLGLEMDEPT 576
Query: 161 QIEMFSKVL-----FNDILGRVVRIFPGGIAIEFSSVQESNIAFKSLIN 204
+ + +V + G VR I +EF + + +I+
Sbjct: 577 DLRVGDRVEMVVPDVGLLRG-FVRRAGRRIGVEFD-FHSEEVRDRLIIS 623
>gi|146282345|ref|YP_001172498.1| glutathione S-transferase domain-containing protein [Pseudomonas
stutzeri A1501]
gi|145570550|gb|ABP79656.1| glutathione S-transferase domain protein [Pseudomonas stutzeri
A1501]
Length = 334
Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 11/116 (9%)
Query: 4 GIHNLQFIDQRAFQRVKVDLKGRFLLFD--GTEYNCIVREISPGGLCIVCDVPMFLVGER 61
+ +L+F+ QR + R D GR + E CIV S + I+ + G R
Sbjct: 106 ALDDLEFLHQR-YTRDDPDYSGRVTVPVLWDRERQCIVNNESAEIIRILNTAFDGITGSR 164
Query: 62 SIVFVEKV-GRIEGKVVNFDS-------NRGYAVRIVTSENERRKLADKLIWLANK 109
+ E + G I+ G+A E +L +L W+ +
Sbjct: 165 LDFYPEPLRGEIDALNARIYPAINNGVYRAGFATTQDAYEEAFDELFRELDWVERR 220
>gi|325499089|gb|EGC96948.1| cellulose synthase catalytic subunit [Escherichia fergusonii
ECD227]
Length = 865
Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 682 SVESKQVRRSHRVEMTMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 738
>gi|218550807|ref|YP_002384598.1| cellulose synthase catalytic subunit [Escherichia fergusonii ATCC
35469]
gi|218358348|emb|CAQ90995.1| cellulose synthase, catalytic subunit [Escherichia fergusonii ATCC
35469]
gi|324111862|gb|EGC05842.1| cellulose synthase catalytic subunit [Escherichia fergusonii B253]
Length = 872
Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|213028702|ref|ZP_03343149.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 266
Score = 36.0 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 81 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 137
>gi|294011555|ref|YP_003545015.1| hypothetical protein SJA_C1-15690 [Sphingobium japonicum UT26S]
gi|292674885|dbj|BAI96403.1| hypothetical protein SJA_C1-15690 [Sphingobium japonicum UT26S]
Length = 138
Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 10 FIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKV 69
F R + R + LK R D E + +VR++S GL CD+ + VGER ++ +
Sbjct: 8 FASNRQYDRQRRLLKARMRHADYGEIDILVRDVSEMGLGGRCDLDL-AVGERVVILLPDC 66
Query: 70 GRIEGKVVNFDSNRGYAVRIVT 91
GK+ + + + V++
Sbjct: 67 RPAPGKIA-WRKGQSFGVQLEA 87
>gi|85715536|ref|ZP_01046517.1| hypothetical protein NB311A_17564 [Nitrobacter sp. Nb-311A]
gi|85697731|gb|EAQ35607.1| hypothetical protein NB311A_17564 [Nitrobacter sp. Nb-311A]
Length = 105
Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 10/84 (11%)
Query: 115 QDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDIL 174
+D R + R + + C++++ S G ++ V + S+
Sbjct: 13 EDRRKHPRVEIDEPAYIST----GGLSMRCRLLNASPQGAALEVPNPAVVPSRFQLMTEK 68
Query: 175 GRVVR------IFPGGIAIEFSSV 192
RV+R I I I F S
Sbjct: 69 DRVIRPCRVIWIKQNRIGISFDSP 92
>gi|23013835|ref|ZP_00053690.1| COG0840: Methyl-accepting chemotaxis protein [Magnetospirillum
magnetotacticum MS-1]
Length = 305
Score = 36.0 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRI 72
+R F+R V + DG +C +++S GG C+ D+ + G R V ++ I
Sbjct: 214 RRQFERFSVSITATV---DGR--SCRTQDLSAGGACLDVDLGL-QSGTRVSVSLDGGELI 267
Query: 73 EGKVVNFDSNR 83
+VV+ + R
Sbjct: 268 LARVVDVEGGR 278
>gi|270264219|ref|ZP_06192486.1| cellulose synthase catalytic subunit [Serratia odorifera 4Rx13]
gi|270041868|gb|EFA14965.1| cellulose synthase catalytic subunit [Serratia odorifera 4Rx13]
Length = 867
Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI 49
++ R RV++ + DG + C +R+ S GG+ I
Sbjct: 687 AVEAKQVRQAHRVEIAMPAAIARADGHLFPCTLRDYSDGGVGI 729
>gi|301611356|ref|XP_002935205.1| PREDICTED: myomesin-1 [Xenopus (Silurana) tropicalis]
Length = 1328
Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 31/85 (36%), Gaps = 4/85 (4%)
Query: 124 ITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFS--KVLFNDILGRV--VR 179
I A L + ++ +VI +++ G S ++ + + ++ GR+ R
Sbjct: 403 IPVRSPRYAVFDLAEGKSYNFRVISVNKHGASEPSEITPPIQAQERLAVPSAPGRIQASR 462
Query: 180 IFPGGIAIEFSSVQESNIAFKSLIN 204
+ ++F + I+
Sbjct: 463 NTRSSVVVQFDKPKLEEELIGYYID 487
>gi|197246934|gb|AAI69171.1| Unknown (protein for IMAGE:7854901) [Xenopus (Silurana) tropicalis]
Length = 1313
Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 31/85 (36%), Gaps = 4/85 (4%)
Query: 124 ITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFS--KVLFNDILGRV--VR 179
I A L + ++ +VI +++ G S ++ + + ++ GR+ R
Sbjct: 390 IPVRSPRYAVFDLAEGKSYNFRVISVNKHGASEPSEITPPIQAQERLAVPSAPGRIQASR 449
Query: 180 IFPGGIAIEFSSVQESNIAFKSLIN 204
+ ++F + I+
Sbjct: 450 NTRSSVVVQFDKPKLEEELIGYYID 474
>gi|91978299|ref|YP_570958.1| Cache, type 2 [Rhodopseudomonas palustris BisB5]
gi|91684755|gb|ABE41057.1| Cache, type 2 [Rhodopseudomonas palustris BisB5]
Length = 661
Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKV- 69
+D+RA R+ ++ G G Y VR+IS G + + + ++ +
Sbjct: 564 VDRRAHARIDIERPGTI-EAGGRTYAVQVRDISEAGARLADAIEALGPDCAVTLGIDGLP 622
Query: 70 GRIEGKVVNFDSNRGYAVRIVTSENE 95
G++ G +V D +R V+ SE +
Sbjct: 623 GKLHGVIVASDPDRT-LVKFDLSEPQ 647
Score = 35.6 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 11/97 (11%)
Query: 116 DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQ-IEMFSKVLF---- 170
D RA+ R ++ +V DISE+G ++ ++ + V
Sbjct: 565 DRRAHARIDIERPGTIE----AGGRTYAVQVRDISEAGARLADAIEALGPDCAVTLGIDG 620
Query: 171 --NDILGRVVRIFPGGIAIEFSSVQESNIAFKSLINH 205
+ G +V P ++F + +S + H
Sbjct: 621 LPGKLHGVIVASDPDRTLVKFDLSEPQQQIIRSFVAH 657
>gi|322832863|ref|YP_004212890.1| cellulose synthase catalytic subunit (UDP-forming) [Rahnella sp.
Y9602]
gi|321168064|gb|ADW73763.1| cellulose synthase catalytic subunit (UDP-forming) [Rahnella sp.
Y9602]
Length = 871
Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVP-MFLVGERSIVF 65
+ R RV+ + L DG Y C +++ S G+ + F G+ +
Sbjct: 688 AFESKQVRQAHRVEARMPASLLKPDGHIYVCTIQDYSDNGVGLETPSASQFHAGDNVTLL 747
Query: 66 VEKVGRIE 73
+ G+ E
Sbjct: 748 L-HRGQQE 754
>gi|288940529|ref|YP_003442769.1| type IV pilus assembly PilZ [Allochromatium vinosum DSM 180]
gi|288895901|gb|ADC61737.1| type IV pilus assembly PilZ [Allochromatium vinosum DSM 180]
Length = 97
Score = 36.0 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Query: 116 DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF 170
+ R + R T +L + +I++S SG + D I +
Sbjct: 6 ERRGFRRLETETDVTITRLT--TGESMTASLINLSASGCAFRSDRPIAPDEDLEI 58
>gi|187926189|ref|YP_001892534.1| type IV pilus assembly PilZ [Ralstonia pickettii 12J]
gi|241665677|ref|YP_002984036.1| type IV pilus assembly PilZ [Ralstonia pickettii 12D]
gi|187727943|gb|ACD29107.1| type IV pilus assembly PilZ [Ralstonia pickettii 12J]
gi|240867704|gb|ACS65364.1| type IV pilus assembly PilZ [Ralstonia pickettii 12D]
Length = 293
Score = 36.0 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 19/106 (17%)
Query: 14 RAFQRVKVDLKGRFLL----FDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKV 69
R +RV+V + R + ++R+I G + P F G+R +
Sbjct: 177 RRAKRVQVRIGARVRAQGQAASAADRVAVIRDICLNGALVQSANPAFQPGDRLALDFNAY 236
Query: 70 --GRIE-----GKVVNFDSNRG--------YAVRIVTSENERRKLA 100
G++E G+V + G + V S+ + +L+
Sbjct: 237 VDGQLETFSLTGRVASGSPALGTTASAFPSFGVEFTLSKEQTAQLS 282
>gi|323174184|gb|EFZ59812.1| cellulose synthase catalytic subunit [Escherichia coli LT-68]
Length = 632
Score = 36.0 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 459 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 515
>gi|323166982|gb|EFZ52721.1| cellulose synthase catalytic subunit [Shigella sonnei 53G]
Length = 753
Score = 36.0 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 570 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 626
>gi|320639849|gb|EFX09443.1| cellulose synthase catalytic subunit [Escherichia coli O157:H7 str.
G5101]
Length = 642
Score = 36.0 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 459 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 515
>gi|466671|gb|AAB18510.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655]
Length = 692
Score = 36.0 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 509 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 565
>gi|33514696|sp|P94200|ALG44_AZOVI RecName: Full=Alginate biosynthesis protein Alg44
gi|1944520|emb|CAA70054.1| Alg44 protein [Azotobacter vinelandii]
Length = 389
Score = 36.0 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGE----RSIVFVEK 68
QR RVK+ K RFL + + +IS GG P+ G + + ++
Sbjct: 17 QRQHARVKLPGKIRFLGPNRETIEQRLIDISAGGFSFASGKPVTQQGAFHRGKLLFQLDS 76
Query: 69 VG---RIEGKVVNFDSNRG 84
+G +E +V N D G
Sbjct: 77 LGLAMDVEFQVRNLDPESG 95
>gi|332996901|gb|EGK16520.1| cellulose synthase catalytic subunit [Shigella flexneri K-272]
Length = 753
Score = 36.0 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 570 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 626
>gi|300897289|ref|ZP_07115725.1| cellulose synthase catalytic subunit [Escherichia coli MS 198-1]
gi|301326682|ref|ZP_07220006.1| cellulose synthase catalytic subunit [Escherichia coli MS 78-1]
gi|300358937|gb|EFJ74807.1| cellulose synthase catalytic subunit [Escherichia coli MS 198-1]
gi|300846657|gb|EFK74417.1| cellulose synthase catalytic subunit [Escherichia coli MS 78-1]
Length = 753
Score = 36.0 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 570 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 626
>gi|157149138|ref|YP_001456457.1| cellulose synthase catalytic subunit [Citrobacter koseri ATCC
BAA-895]
gi|157086343|gb|ABV16021.1| hypothetical protein CKO_04977 [Citrobacter koseri ATCC BAA-895]
Length = 868
Score = 36.0 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V + S GGL I + L G++
Sbjct: 690 SVESKQVRRAHRVEISMPAAIAREDGHLFSCTVHDFSDGGLGIRINGQAQVLEGQKV 746
>gi|83944903|ref|ZP_00957269.1| Methyl-accepting chemotaxis protein [Oceanicaulis alexandrii
HTCC2633]
gi|83851685|gb|EAP89540.1| Methyl-accepting chemotaxis protein [Oceanicaulis alexandrii
HTCC2633]
Length = 810
Score = 36.0 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 5/67 (7%)
Query: 130 VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF-----NDILGRVVRIFPGG 184
A +V + DIS GV + +++ + +V I RV +
Sbjct: 732 TQAVVVTQSGRSLEATLRDISLGGVRIEPPIKVSLGERVEICFPTGERIRARVAHVDSTY 791
Query: 185 IAIEFSS 191
+ F
Sbjct: 792 CGLAFVE 798
>gi|307294102|ref|ZP_07573946.1| type IV pilus assembly PilZ [Sphingobium chlorophenolicum L-1]
gi|306880253|gb|EFN11470.1| type IV pilus assembly PilZ [Sphingobium chlorophenolicum L-1]
Length = 99
Score = 36.0 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 25/94 (26%), Gaps = 4/94 (4%)
Query: 113 HLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFND 172
L D R R + + T +D+S G + ++
Sbjct: 3 DLIDDAGERRLDPRHKMFGPVALRFGGTAARAHFLDLSCWGALAYCETPPGTGVYLIVEA 62
Query: 173 I----LGRVVRIFPGGIAIEFSSVQESNIAFKSL 202
+ RV+ I+F+ + +
Sbjct: 63 LGVQASARVIWANGKRFGIQFNQPLAQDAMDAWI 96
>gi|294638219|ref|ZP_06716473.1| cellulose synthase catalytic subunit [Edwardsiella tarda ATCC
23685]
gi|291088655|gb|EFE21216.1| cellulose synthase catalytic subunit [Edwardsiella tarda ATCC
23685]
Length = 746
Score = 36.0 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLV--GERSIV 64
++ R RV++ + + DG Y C +R+ S GG+ + ++ GE +
Sbjct: 572 AVEVRQLRQAHRVEMAMPAVLMRHDGHLYPCTLRDYSDGGVGVELADDRLVLQEGEPISL 631
Query: 65 FVE 67
++
Sbjct: 632 LLQ 634
>gi|103487135|ref|YP_616696.1| type IV pilus assembly PilZ [Sphingopyxis alaskensis RB2256]
gi|98977212|gb|ABF53363.1| type IV pilus assembly PilZ [Sphingopyxis alaskensis RB2256]
Length = 113
Score = 36.0 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+DQR R V + F++ DG + C IS GL + + + G+ + + +G
Sbjct: 14 LDQRIAPRSDVYCRLPFVMPDGRQEMCTCVNISADGLLMRFERGL-EPGDLIVFRMPIIG 72
Query: 71 RIEGKVV 77
R KVV
Sbjct: 73 RAAAKVV 79
Score = 34.5 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 120 YGRKITR-DREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVL-----FNDI 173
R R D V+ D + C ++IS G+ + + +E ++
Sbjct: 15 DQRIAPRSDVYCRLPFVMPDGRQEMCTCVNISADGLLMRFERGLEPGDLIVFRMPIIGRA 74
Query: 174 LGRVVRIFPGGIAIEF 189
+VV G ++F
Sbjct: 75 AAKVVWSLGGKTGVQF 90
>gi|333013413|gb|EGK32785.1| cellulose synthase catalytic subunit [Shigella flexneri K-227]
Length = 730
Score = 36.0 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 547 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 603
>gi|238757377|ref|ZP_04618563.1| Cellulose synthase catalytic subunit [UDP-forming] [Yersinia
aldovae ATCC 35236]
gi|238704416|gb|EEP96947.1| Cellulose synthase catalytic subunit [UDP-forming] [Yersinia
aldovae ATCC 35236]
Length = 869
Score = 36.0 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI 49
++ R RV++ + DG ++C +R+ S GG+ I
Sbjct: 686 AVEAKQVRQSHRVEIAMPAAVARADGHLFSCTLRDYSDGGVGI 728
>gi|123444247|ref|YP_001008215.1| cellulose synthase catalytic subunit [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|122091208|emb|CAL14091.1| cellulose synthase 1 catalytic subunit [UDP-forming] [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 875
Score = 36.0 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI 49
++ R RV++ + DG ++C +R+ S GG+ I
Sbjct: 692 AVEAKQVRQSHRVEIAMPAAVARADGHLFSCTLRDYSDGGVGI 734
>gi|150021312|ref|YP_001306666.1| type IV pilus assembly PilZ [Thermosipho melanesiensis BI429]
gi|149793833|gb|ABR31281.1| type IV pilus assembly PilZ [Thermosipho melanesiensis BI429]
Length = 220
Score = 36.0 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNC---IVREISPGGLCIVCDVPMFLVGERSIVFVE 67
++R F+R+ + L G F L T + ++ S GG+ IV D I+ ++
Sbjct: 107 TERRRFKRIPLFLFGTFKLSPKTNAEAIQFMTKDFSAGGIKIVTDA---------ILHLD 157
Query: 68 KV 69
+
Sbjct: 158 DI 159
>gi|332996201|gb|EGK15828.1| cellulose synthase catalytic subunit [Shigella flexneri VA-6]
Length = 730
Score = 36.0 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 547 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 603
>gi|324113959|gb|EGC07933.1| YcgR protein [Escherichia fergusonii B253]
Length = 244
Score = 36.0 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 110 DDLHLQDCRAYGRK-ITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIE 163
L R Y R L DN+K C++ D+S G+ V ++
Sbjct: 106 QSLWFVQRRKYFRISAPLHPPYYCTAQLPDNSKLRCRLYDLSLGGMGVLLETAPP 160
>gi|289808444|ref|ZP_06539073.1| cellulose synthase catalytic subunit [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 113
Score = 36.0 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + G DG ++C V + S GGL I + L G++
Sbjct: 49 SVESKQVRRAHRVEIAMPGAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 105
>gi|261213060|ref|ZP_05927344.1| hypothetical protein VCJ_003338 [Vibrio sp. RC341]
gi|260838125|gb|EEX64802.1| hypothetical protein VCJ_003338 [Vibrio sp. RC341]
Length = 252
Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Query: 122 RKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILG 175
RK R A V+ D + C++ D+S SG + D++
Sbjct: 136 RKEPRFELNLAGKVVFDGHRGDCELRDLSRSGCRFIT---PPLGKTYQVGDLVA 186
>gi|320650660|gb|EFX19126.1| cellulose synthase catalytic subunit [Escherichia coli O157:H- str.
H 2687]
Length = 341
Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 158 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 214
>gi|320645349|gb|EFX14365.1| cellulose synthase catalytic subunit [Escherichia coli O157:H- str.
493-89]
Length = 340
Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 157 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 213
>gi|311254052|ref|XP_003125727.1| PREDICTED: cell adhesion molecule 3 isoform 2 [Sus scrofa]
Length = 396
Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 18/141 (12%)
Query: 29 LFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVR 88
L D EY C + + P + + + I G + +
Sbjct: 100 LADEGEYTCSIFTM-PVRTAKSLVTVLGIPQKPII---------TGYKSSLREKDTTTLN 149
Query: 89 IVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVL-----NDNTKHS 143
+S ++ A +L W +LH + R + V + + +D
Sbjct: 150 CQSSGSKP---AAQLTWRKGDQELHGEPTRVQEDPNGKTFTVSSSVTFQVTQEDDGADIV 206
Query: 144 CKVIDISESGVSVSVDLQIEM 164
C V S G S +IE+
Sbjct: 207 CSVNHESLKGADRSTSQRIEV 227
>gi|311254047|ref|XP_003125733.1| PREDICTED: cell adhesion molecule 3-like [Sus scrofa]
Length = 403
Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 18/141 (12%)
Query: 29 LFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVR 88
L D EY C + + P + + + I G + +
Sbjct: 134 LADEGEYTCSIFTM-PVRTAKSLVTVLGIPQKPII---------TGYKSSLREKDTTTLN 183
Query: 89 IVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVL-----NDNTKHS 143
+S ++ A +L W +LH + R + V + + +D
Sbjct: 184 CQSSGSKP---AAQLTWRKGDQELHGEPTRVQEDPNGKTFTVSSSVTFQVTQEDDGADIV 240
Query: 144 CKVIDISESGVSVSVDLQIEM 164
C V S G S +IE+
Sbjct: 241 CSVNHESLKGADRSTSQRIEV 261
>gi|194035881|ref|XP_001929212.1| PREDICTED: cell adhesion molecule 3 isoform 1 [Sus scrofa]
Length = 430
Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 18/141 (12%)
Query: 29 LFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVR 88
L D EY C + + P + + + I G + +
Sbjct: 134 LADEGEYTCSIFTM-PVRTAKSLVTVLGIPQKPII---------TGYKSSLREKDTTTLN 183
Query: 89 IVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVL-----NDNTKHS 143
+S ++ A +L W +LH + R + V + + +D
Sbjct: 184 CQSSGSKP---AAQLTWRKGDQELHGEPTRVQEDPNGKTFTVSSSVTFQVTQEDDGADIV 240
Query: 144 CKVIDISESGVSVSVDLQIEM 164
C V S G S +IE+
Sbjct: 241 CSVNHESLKGADRSTSQRIEV 261
>gi|328469282|gb|EGF40228.1| hypothetical protein VP10329_10376 [Vibrio parahaemolyticus 10329]
Length = 244
Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIV-CDVPMF-LVGERSIV 64
+Q R R +V+LK R L D C +R++S G V + VG+R +
Sbjct: 127 TMQVFQLRKEVRYEVNLKARVRL-DEYRSECEIRDLSRSGCRFVTSPMSRPLQVGDRITL 185
Query: 65 FV 66
+
Sbjct: 186 DL 187
>gi|320173075|gb|EFW48294.1| Cellulose synthase catalytic subunit [Shigella dysenteriae CDC
74-1112]
Length = 312
Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 129 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 185
>gi|218549109|ref|YP_002382900.1| regulator [Escherichia fergusonii ATCC 35469]
gi|218356650|emb|CAQ89276.1| putative regulator [Escherichia fergusonii ATCC 35469]
Length = 244
Score = 35.6 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 110 DDLHLQDCRAYGRK-ITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIE 163
L R Y R L DN+K C++ D+S G+ V ++
Sbjct: 106 QSLWFVQRRKYFRISAPLHPPYYCTAQLPDNSKLRCRLYDLSLGGMGVLLETAPP 160
>gi|320108515|ref|YP_004184105.1| cellulose synthase catalytic subunit [Terriglobus saanensis SP1PR4]
gi|319927036|gb|ADV84111.1| cellulose synthase catalytic subunit (UDP-forming) [Terriglobus
saanensis SP1PR4]
Length = 1452
Score = 35.6 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 19/129 (14%)
Query: 93 ENERRKLADKLIW-LANKDDLHLQDCRAYG----RKITRDR-EVDAQLVLNDNTKHSCKV 146
+ L+W L N L + A+ R R ++ D + S
Sbjct: 534 PQHPGVILSNLLWILFNMVILGVAAAVAHEQQQRRSSVRIPVKIGVTARFPDGRQISGLT 593
Query: 147 IDISESGVSVSVDL---QIEMFSKVLF--------NDILGRVVRIFPGGIAIEF--SSVQ 193
D+S G S+S++L ++ VL +I V F G I ++F ++
Sbjct: 594 SDMSVGGASISLNLGTEEVRKGDAVLVSFPVQTGDAEIRSIVAGTFRGEIRLQFADLTIA 653
Query: 194 ESNIAFKSL 202
E ++L
Sbjct: 654 EQETLTRAL 662
Score = 35.2 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLV--GERSIVFVE-K 68
+R+ R+ V + DG + + + ++S GG I ++ V G+ +V +
Sbjct: 566 QRRSSVRIPVKIGVTARFPDGRQISGLTSDMSVGGASISLNLGTEEVRKGDAVLVSFPVQ 625
Query: 69 VGRIEGK-VVNFDSNRGYAVRIV-TSENERRKLADKL-----IWLANKDDLHLQDCR 118
G E + +V ++ + E+ L L W++ +D +++D R
Sbjct: 626 TGDAEIRSIVAGTFRGEIRLQFADLTIAEQETLTRALYSRADSWISGRD--NIEDDR 680
>gi|149185877|ref|ZP_01864192.1| hypothetical protein ED21_24126 [Erythrobacter sp. SD-21]
gi|148830438|gb|EDL48874.1| hypothetical protein ED21_24126 [Erythrobacter sp. SD-21]
Length = 101
Score = 35.6 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
++ R QR + ++GR+ G ++ ++++S G V G++ V V +VG
Sbjct: 1 MELRREQRYSISVRGRYRKGTGVRFDIAIKDLSEYGCQFADLVGRVSQGDQITVRVGEVG 60
Query: 71 RIEGKV 76
I +V
Sbjct: 61 PIAAQV 66
>gi|31790488|emb|CAD56668.1| cellulose synthase catalytic subunit [Citrobacter sp. Fec2]
Length = 873
Score = 35.6 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEISMPAAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|325497530|gb|EGC95389.1| regulator [Escherichia fergusonii ECD227]
Length = 244
Score = 35.6 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 110 DDLHLQDCRAYGRK-ITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIE 163
L R Y R L DN+K C++ D+S G+ V ++
Sbjct: 106 QSLWFVQRRKYFRISAPLHPPYYCTAQLPDNSKLRCRLYDLSLGGMGVLLETAPP 160
>gi|323939487|gb|EGB35696.1| cellulose synthase catalytic subunit [Escherichia coli E482]
Length = 872
Score = 35.6 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTIPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|260362902|ref|ZP_05775771.1| type IV pilus assembly protein PilZ [Vibrio parahaemolyticus K5030]
gi|260880189|ref|ZP_05892544.1| type IV pilus assembly protein PilZ [Vibrio parahaemolyticus
AN-5034]
gi|260895306|ref|ZP_05903802.1| type IV pilus assembly protein PilZ [Vibrio parahaemolyticus
Peru-466]
gi|260901131|ref|ZP_05909526.1| type IV pilus assembly protein PilZ [Vibrio parahaemolyticus
AQ4037]
gi|308085720|gb|EFO35415.1| type IV pilus assembly protein PilZ [Vibrio parahaemolyticus
Peru-466]
gi|308091721|gb|EFO41416.1| type IV pilus assembly protein PilZ [Vibrio parahaemolyticus
AN-5034]
gi|308109377|gb|EFO46917.1| type IV pilus assembly protein PilZ [Vibrio parahaemolyticus
AQ4037]
gi|308112186|gb|EFO49726.1| type IV pilus assembly protein PilZ [Vibrio parahaemolyticus K5030]
Length = 244
Score = 35.6 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIV-CDVPMF-LVGERSIV 64
+Q R R +V+LK R L D C +R++S G V + VG+R +
Sbjct: 127 TMQVFQLRKEVRYEVNLKARVRL-DEYRSECEIRDLSRSGCRFVTSPMSRPLQVGDRITL 185
Query: 65 FV 66
+
Sbjct: 186 DL 187
>gi|261251715|ref|ZP_05944289.1| hypothetical protein VIA_001736 [Vibrio orientalis CIP 102891]
gi|260938588|gb|EEX94576.1| hypothetical protein VIA_001736 [Vibrio orientalis CIP 102891]
Length = 258
Score = 35.6 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIE 73
RA R+++ L G L + +Y C +R+IS G IV D G S++ + IE
Sbjct: 145 RASARLEISLDG-VLSPNKHKYPCQIRDISQHGCLIVVDRAKTSYGVGSVIELT----IE 199
Query: 74 GKVVNFDSNRGYAVRI 89
++ S++ + I
Sbjct: 200 ANTLDETSSQQFLKAI 215
>gi|153836093|ref|ZP_01988760.1| type IV pilus assembly protein PilZ [Vibrio parahaemolyticus
AQ3810]
gi|149750847|gb|EDM61592.1| type IV pilus assembly protein PilZ [Vibrio parahaemolyticus
AQ3810]
Length = 244
Score = 35.6 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIV-CDVPMF-LVGERSIV 64
+Q R R +V+LK R L D C +R++S G V + VG+R +
Sbjct: 127 TMQVFQLRKEVRYEVNLKARVRL-DEYRSECEIRDLSRSGCRFVTSPMSRPLQVGDRITL 185
Query: 65 FV 66
+
Sbjct: 186 DL 187
>gi|146313562|ref|YP_001178636.1| cellulose synthase catalytic subunit [Enterobacter sp. 638]
gi|145320438|gb|ABP62585.1| Cellulose synthase (UDP-forming) [Enterobacter sp. 638]
Length = 872
Score = 35.6 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEISMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAKVLEGQKV 745
>gi|34498133|ref|NP_902348.1| cellulose synthase subunit A [Chromobacterium violaceum ATCC 12472]
gi|34103988|gb|AAQ60348.1| cellulose synthase, subunit A [Chromobacterium violaceum ATCC
12472]
Length = 852
Score = 35.6 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 114 LQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMF 165
L+ RA R A L L D H C+++D SE G+++ + +
Sbjct: 683 LRQVRAAHRV---RASRQAALHLPDGRVHRCRMLDYSEGGMALQLAREPRSG 731
Score = 34.5 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 38/116 (32%), Gaps = 10/116 (8%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVG----ERSIVFVEKV 69
RA RV+ + L DG + C + + S GG+ + G V + +
Sbjct: 687 RAAHRVRASRQAALHLPDGRVHRCRMLDYSEGGMALQLA-REPRSGMDGDAELTVSLRQD 745
Query: 70 GRIEGKVVNFDSNRGYAVRIVTSE---NERRKLADKLIWLANKDDLHLQDCRAYGR 122
GR + G V + + +R +L D ++ R R
Sbjct: 746 GRSYAFPCRMAFSSGDRVSVRFPDLTLAQRSELMQC--TFGRPDAWAERETRKRER 799
>gi|328876657|gb|EGG25020.1| immunoglobulin E-set domain-containing protein [Dictyostelium
fasciculatum]
Length = 1257
Score = 35.6 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 22/56 (39%)
Query: 21 VDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKV 76
V+L G++L + N IS GG+ V G + + + + E +
Sbjct: 800 VELVGKYLWTTRLDSNTTTISISVGGIPCTSPVANGNDGTKLKCTLGDLSQYESDI 855
>gi|307294330|ref|ZP_07574174.1| hypothetical protein SphchDRAFT_1800 [Sphingobium
chlorophenolicum L-1]
gi|306880481|gb|EFN11698.1| hypothetical protein SphchDRAFT_1800 [Sphingobium
chlorophenolicum L-1]
Length = 139
Score = 35.6 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEK 68
+F+ +R ++R + LK R E + +VR +S G+ C++ + +G+R ++ +
Sbjct: 7 EFVSKRQYERRRRLLKARMRHPRHGEIDILVRNVSELGIGGRCELDL-ALGDRVVITLPD 65
Query: 69 VGRIEGKVVNFDSNRGYAVRIVTS 92
EG + + + + VR+ S
Sbjct: 66 CAPAEGSIA-WRRGQAFGVRLGAS 88
>gi|188581592|ref|YP_001925037.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
[Methylobacterium populi BJ001]
gi|179345090|gb|ACB80502.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
[Methylobacterium populi BJ001]
Length = 654
Score = 35.6 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 141 KHSCKVIDISESGV--SVSVDLQIEMFSKVLFND--ILGRVVRIFPGGIAIEFS 190
+ C V+++SE G +V E+F+ + + R++R GI ++F
Sbjct: 601 RRPCTVLNLSEGGAKLAVEAAGLPEVFTLHVDGEPPRRCRLMRRTEDGIGVQFL 654
>gi|160895557|ref|YP_001561139.1| 4-hydroxyphenylacetate degradation bifunctional
isomerase/decarboxylase subunit HpaG1 [Delftia
acidovorans SPH-1]
gi|160361141|gb|ABX32754.1| 4-hydroxyphenylacetate degradation bifunctional
isomerase/decarboxylase, HpaG1 subunit [Delftia
acidovorans SPH-1]
Length = 226
Score = 35.6 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV---PMFLVGERSIVFVEKV 69
QR F + V R LL D TE+ +SPG + ++ P+ G+R ++ V +
Sbjct: 158 QRGFADL-VRSPAR-LLADVTEF----MTLSPGDVLLLGPGEGAPLARPGDRVVIEVPGL 211
Query: 70 GRIEGKVV 77
GR+ VV
Sbjct: 212 GRLTHSVV 219
>gi|187920511|ref|YP_001889543.1| cellulose synthase catalytic subunit [Burkholderia phytofirmans
PsJN]
gi|187718949|gb|ACD20172.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
phytofirmans PsJN]
Length = 734
Score = 35.6 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 11/94 (11%)
Query: 117 CRAYGRKITRDREV-DAQLVLNDNTKHSCKVIDISESGV--SVSVDLQIEMFSKVLFN-- 171
R R + R L + +C+ ID SE GV ++ +Q+ M +V +
Sbjct: 573 ERRQIRAVHRVAMQMPVMLKFSTGRTLACETIDYSEGGVGVALPAAIQVPMHERVTVSLF 632
Query: 172 ------DILGRVVRIFPGGIAIEFSSVQESNIAF 199
V PG + + FS++
Sbjct: 633 RGDEEYAFPATVGFTAPGRVGLRFSAMTREQEYE 666
>gi|222054509|ref|YP_002536871.1| type IV pilus assembly PilZ [Geobacter sp. FRC-32]
gi|221563798|gb|ACM19770.1| type IV pilus assembly PilZ [Geobacter sp. FRC-32]
Length = 118
Score = 35.6 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 16/85 (18%)
Query: 117 CRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN----- 171
R + R + DA + N+ + +V D+S G+ V I + V +
Sbjct: 3 QRKFDRF---SFKADAHITYNN-VTFTGEVADLSLKGLFVKTTQVIAVNEPVKVSINFKG 58
Query: 172 -------DILGRVVRIFPGGIAIEF 189
I VVR GI + F
Sbjct: 59 SEEKFSFTIPATVVRRTDTGIGLSF 83
>gi|28901346|ref|NP_801001.1| hypothetical protein VPA1491 [Vibrio parahaemolyticus RIMD 2210633]
gi|28809893|dbj|BAC62834.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 247
Score = 35.6 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIV-CDVPMF-LVGERSIV 64
+Q R R +V+LK R L D C +R++S G V + VG+R +
Sbjct: 130 TMQVFQLRKEVRYEVNLKARVRL-DEYRSECEIRDLSRSGCRFVTSPMSRPLQVGDRITL 188
Query: 65 FV 66
+
Sbjct: 189 DL 190
>gi|238761228|ref|ZP_04622205.1| Cellulose synthase catalytic subunit [UDP-forming] [Yersinia
kristensenii ATCC 33638]
gi|238761481|ref|ZP_04622457.1| Cellulose synthase catalytic subunit [UDP-forming] [Yersinia
kristensenii ATCC 33638]
gi|238700455|gb|EEP93196.1| Cellulose synthase catalytic subunit [UDP-forming] [Yersinia
kristensenii ATCC 33638]
gi|238700708|gb|EEP93448.1| Cellulose synthase catalytic subunit [UDP-forming] [Yersinia
kristensenii ATCC 33638]
Length = 869
Score = 35.6 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI 49
++ R RV++ + DG ++C +R+ S GG+ I
Sbjct: 686 AVEAKQVRQSHRVEIAMPAGVARADGHLFSCTLRDYSDGGVGI 728
>gi|254421355|ref|ZP_05035073.1| single-stranded-DNA-specific exonuclease RecJ, putative
[Synechococcus sp. PCC 7335]
gi|196188844|gb|EDX83808.1| single-stranded-DNA-specific exonuclease RecJ, putative
[Synechococcus sp. PCC 7335]
Length = 817
Score = 35.6 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 24/128 (18%)
Query: 57 LVGERSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERR--KLADKLIWLANKDDLHL 114
G+R +G V + V ++TS++ R LA+K LAN L
Sbjct: 288 RAGDRPTDISFGIGPRINAVSRIYGEASFCVELLTSQDSDRCQDLAEK-TELANTRRKAL 346
Query: 115 QDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDIL 174
Q+ V Q H + D+S +GV V D Q + + +
Sbjct: 347 QND------------VLKQAT------HQLETRDLSTTGVIVLCDPQWPVG---VLGLVA 385
Query: 175 GRVVRIFP 182
+V + +
Sbjct: 386 AQVAQQYG 393
>gi|162454134|ref|YP_001616501.1| hypothetical protein sce5858 [Sorangium cellulosum 'So ce 56']
gi|161164716|emb|CAN96021.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length = 101
Score = 35.6 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 13/94 (13%)
Query: 114 LQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKV-LFND 172
++D R + R + E+ + D + D+S G+ + + V +
Sbjct: 1 MRDHRKHPR---KQIELSIAFRIGDGPRVDAICRDLSLGGMFIETSSPAPFGATVEVLLS 57
Query: 173 ILG--------RVVRI-FPGGIAIEFSSVQESNI 197
+ G VVR P G+ ++F +
Sbjct: 58 LQGLKQVAVIPSVVRWTTPEGMGVQFGMMGARET 91
Score = 34.9 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI--VCDVPMFLVGERSIVFVEKV 69
D R R +++L F + DG + I R++S GG+ I P E ++ ++ +
Sbjct: 3 DHRKHPRKQIELSIAFRIGDGPRVDAICRDLSLGGMFIETSSPAPFGATVE-VLLSLQGL 61
Query: 70 GRIE--GKVVNFDSNRGYAVRIVTSENERRKLADKL 103
++ VV + + G V+ +L
Sbjct: 62 KQVAVIPSVVRWTTPEGMGVQFGMMGARETYALTQL 97
>gi|121533739|ref|ZP_01665566.1| type IV pilus assembly PilZ [Thermosinus carboxydivorans Nor1]
gi|121307730|gb|EAX48645.1| type IV pilus assembly PilZ [Thermosinus carboxydivorans Nor1]
Length = 211
Score = 35.6 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 22/130 (16%)
Query: 6 HNLQFIDQRAFQRVKVDLKGRFLLFDGTE------YNCIVREISPGGLCIVCDVPMF-LV 58
+ + QR+F RV+ L +FD + R++S GG+ +V + +
Sbjct: 86 REIIKVQQRSFVRVRTSLPVEISIFDDETAQFSNPFQARSRDLSGGGIQLVSKEALDLAM 145
Query: 59 GERSIVFVEKVGRIE--GKVVNFD----SNRGYAVRIVT---SENERRKLADKLIWLANK 109
+ + + G I G+VV + + + I +E ER K+ +
Sbjct: 146 KVQLAFELPEAGPIVVNGEVVRIEKPHHDRDIFWIGIKFLDLAERERSKIIRYIF----- 200
Query: 110 DDLHLQDCRA 119
L++ R
Sbjct: 201 -KKQLEERRK 209
>gi|283787824|ref|YP_003367689.1| cellulose synthase catalytic subunit [UDP-forming] [Citrobacter
rodentium ICC168]
gi|282951278|emb|CBG90973.1| cellulose synthase catalytic subunit [UDP-forming] [Citrobacter
rodentium ICC168]
Length = 873
Score = 35.6 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEISMPAAIAREDGHLFSCTVHDFSDGGLGIKINGQAQVLEGQKV 745
>gi|330811548|ref|YP_004356010.1| alginate biosynthesis protein Alg44 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379656|gb|AEA71006.1| Putative alginate biosynthesis protein Alg44 [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 389
Score = 35.6 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 6/103 (5%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRI 72
QR RVK+ K RF D T V ++S GGL GE GR+
Sbjct: 16 QRQHARVKIPAKLRFFGPDRTPMEVKVLDLSAGGLSFNAGQMPLKTGE------SYKGRL 69
Query: 73 EGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQ 115
+ + N ++I + + + + + L +D L+
Sbjct: 70 QFVIDNLGLAMDVELQIRSYDRQTGRTGCQFQNLEPRDISTLR 112
>gi|194431256|ref|ZP_03063549.1| cellulose synthase [Shigella dysenteriae 1012]
gi|194420711|gb|EDX36787.1| cellulose synthase [Shigella dysenteriae 1012]
gi|332083076|gb|EGI88308.1| cellulose synthase catalytic subunit [Shigella dysenteriae 155-74]
Length = 830
Score = 35.6 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 647 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 703
>gi|320198340|gb|EFW72943.1| Cellulose synthase catalytic subunit [Escherichia coli EC4100B]
Length = 872
Score = 35.6 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V SN
Sbjct: 749 LKR-GQQEYVFPTQVARVMSNE 769
>gi|307314339|ref|ZP_07593946.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli W]
gi|306906054|gb|EFN36574.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli W]
gi|315062812|gb|ADT77139.1| cellulose synthase catalytic subunit [Escherichia coli W]
gi|323376600|gb|ADX48868.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli KO11]
Length = 872
Score = 35.6 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVF 65
+++ R RV++ + DG ++C V++ S GGL I + L G++ +
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLL 748
Query: 66 VEKVGR----IEGKVVNFDSNR 83
+++ G+ +V SN
Sbjct: 749 LKR-GQQEYVFPTQVARVMSNE 769
>gi|300937603|ref|ZP_07152412.1| cellulose synthase catalytic subunit [Escherichia coli MS 21-1]
gi|300457333|gb|EFK20826.1| cellulose synthase catalytic subunit [Escherichia coli MS 21-1]
Length = 704
Score = 35.6 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 6/65 (9%)
Query: 102 KLIWLANK-----DDLHLQDCRAYGRKITR-DREVDAQLVLNDNTKHSCKVIDISESGVS 155
LIWL L + + R R D + L D + C VID SE G+
Sbjct: 532 CLIWLIYNTIIIGATLAVSIEQKQVRFSPRIDVSFKGVIKLADGRCYPCSVIDFSEGGLG 591
Query: 156 VSVDL 160
V VD
Sbjct: 592 VIVDH 596
Score = 35.6 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI----VCDVPMFLVGERS 62
+++ R R+ V KG L DG Y C V + S GGL + + DV +
Sbjct: 550 SIEQKQVRFSPRIDVSFKGVIKLADGRCYPCSVIDFSEGGLGVIVDHISDVKEIEKTQHL 609
Query: 63 IVFVEK 68
+++
Sbjct: 610 SLYLSD 615
>gi|148258158|ref|YP_001242743.1| putative methyl-accepting chemotaxis receptor/sensory transducer
[Bradyrhizobium sp. BTAi1]
gi|146410331|gb|ABQ38837.1| Putative methyl-accepting chemotaxis receptor/sensory transducer
[Bradyrhizobium sp. BTAi1]
Length = 661
Score = 35.6 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 11/82 (13%)
Query: 116 DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVS-VDLQIEMFSKVLFN--- 171
D R R + + V ++S G + + +Q+ + + V
Sbjct: 565 DRRLSTRLNINRPGTLQV----NGAPIAVTVRNLSLGGALLEQIPVQLSINTPVALGITG 620
Query: 172 ---DILGRVVRIFPGGIAIEFS 190
D+ G V R+ ++F+
Sbjct: 621 MVSDLPGTVTRVSDRTALVQFT 642
>gi|332085110|gb|EGI90290.1| cellulose synthase catalytic subunit [Shigella boydii 5216-82]
Length = 872
Score = 35.6 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|320183456|gb|EFW58305.1| Cellulose synthase catalytic subunit [Shigella flexneri CDC 796-83]
Length = 872
Score = 35.6 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|161984835|ref|YP_409844.2| cellulose synthase catalytic subunit [Shigella boydii Sb227]
gi|332089548|gb|EGI94652.1| cellulose synthase catalytic subunit [Shigella boydii 3594-74]
Length = 870
Score = 35.6 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 687 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 743
>gi|331665154|ref|ZP_08366055.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli TA143]
gi|331057664|gb|EGI29650.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli TA143]
Length = 872
Score = 35.6 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|331685190|ref|ZP_08385776.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli H299]
gi|331077561|gb|EGI48773.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli H299]
Length = 872
Score = 35.6 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|300815251|ref|ZP_07095476.1| cellulose synthase catalytic subunit [Escherichia coli MS 107-1]
gi|300532143|gb|EFK53205.1| cellulose synthase catalytic subunit [Escherichia coli MS 107-1]
Length = 872
Score = 35.6 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|170679974|ref|YP_001745808.1| cellulose synthase catalytic subunit [Escherichia coli SMS-3-5]
gi|293412963|ref|ZP_06655631.1| conserved hypothetical protein [Escherichia coli B354]
gi|170517692|gb|ACB15870.1| cellulose synthase (UDP-forming) [Escherichia coli SMS-3-5]
gi|291468610|gb|EFF11103.1| conserved hypothetical protein [Escherichia coli B354]
Length = 872
Score = 35.6 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|193061696|ref|ZP_03042793.1| cellulose synthase [Escherichia coli E22]
gi|192932486|gb|EDV85083.1| cellulose synthase [Escherichia coli E22]
Length = 872
Score = 35.6 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|193068518|ref|ZP_03049480.1| cellulose synthase [Escherichia coli E110019]
gi|192958169|gb|EDV88610.1| cellulose synthase [Escherichia coli E110019]
Length = 872
Score = 35.6 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|157155670|ref|YP_001465003.1| cellulose synthase catalytic subunit [Escherichia coli E24377A]
gi|188495047|ref|ZP_03002317.1| cellulose synthase, catalytic subunit [Escherichia coli 53638]
gi|218697243|ref|YP_002404910.1| cellulose synthase catalytic subunit [Escherichia coli 55989]
gi|256020880|ref|ZP_05434745.1| cellulose synthase catalytic subunit [Shigella sp. D9]
gi|293453837|ref|ZP_06664256.1| bcsA [Escherichia coli B088]
gi|300822070|ref|ZP_07102213.1| cellulose synthase catalytic subunit [Escherichia coli MS 119-7]
gi|300907571|ref|ZP_07125207.1| cellulose synthase catalytic subunit [Escherichia coli MS 84-1]
gi|300922358|ref|ZP_07138480.1| cellulose synthase catalytic subunit [Escherichia coli MS 182-1]
gi|301306686|ref|ZP_07212743.1| cellulose synthase catalytic subunit [Escherichia coli MS 124-1]
gi|331670365|ref|ZP_08371204.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli TA271]
gi|157077700|gb|ABV17408.1| cellulose synthase (UDP-forming) [Escherichia coli E24377A]
gi|188490246|gb|EDU65349.1| cellulose synthase, catalytic subunit [Escherichia coli 53638]
gi|218353975|emb|CAV00442.1| cellulose synthase, catalytic subunit [Escherichia coli 55989]
gi|291321963|gb|EFE61394.1| bcsA [Escherichia coli B088]
gi|300400688|gb|EFJ84226.1| cellulose synthase catalytic subunit [Escherichia coli MS 84-1]
gi|300421298|gb|EFK04609.1| cellulose synthase catalytic subunit [Escherichia coli MS 182-1]
gi|300525433|gb|EFK46502.1| cellulose synthase catalytic subunit [Escherichia coli MS 119-7]
gi|300838079|gb|EFK65839.1| cellulose synthase catalytic subunit [Escherichia coli MS 124-1]
gi|315254058|gb|EFU34026.1| cellulose synthase catalytic subunit [Escherichia coli MS 85-1]
gi|323944496|gb|EGB40568.1| cellulose synthase catalytic [Escherichia coli H120]
gi|324021164|gb|EGB90383.1| cellulose synthase catalytic subunit [Escherichia coli MS 117-3]
gi|331062427|gb|EGI34347.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli TA271]
Length = 872
Score = 35.6 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|320182043|gb|EFW56948.1| Cellulose synthase catalytic subunit [Shigella boydii ATCC 9905]
Length = 872
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|315618434|gb|EFU99021.1| cellulose synthase catalytic subunit [UDP-forming] [Escherichia
coli 3431]
Length = 865
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 682 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 738
>gi|312959097|ref|ZP_07773616.1| alginate biosynthesis protein Alg44 [Pseudomonas fluorescens WH6]
gi|311286867|gb|EFQ65429.1| alginate biosynthesis protein Alg44 [Pseudomonas fluorescens WH6]
Length = 388
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 11/86 (12%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRI 72
QR RVK+ K RF D T V ++S GGL P+ VG+ GR+
Sbjct: 16 QRQHARVKIPAKLRFFNSDRTPTEARVIDLSAGGLAFTATQPL-TVGQV------HKGRL 68
Query: 73 EGKVVNFDSNRGYAVRIVTSENERRK 98
+ + N G A+ + +
Sbjct: 69 QFVI----DNLGLAMDVELQIRSYDR 90
>gi|300927972|ref|ZP_07143529.1| cellulose synthase catalytic subunit [Escherichia coli MS 187-1]
gi|300463979|gb|EFK27472.1| cellulose synthase catalytic subunit [Escherichia coli MS 187-1]
Length = 872
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|300916738|ref|ZP_07133449.1| cellulose synthase catalytic subunit [Escherichia coli MS 115-1]
gi|300415960|gb|EFJ99270.1| cellulose synthase catalytic subunit [Escherichia coli MS 115-1]
Length = 872
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|293416978|ref|ZP_06659615.1| bcsA [Escherichia coli B185]
gi|291431554|gb|EFF04539.1| bcsA [Escherichia coli B185]
Length = 872
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|301025868|ref|ZP_07189356.1| cellulose synthase catalytic subunit [Escherichia coli MS 69-1]
gi|284923563|emb|CBG36658.1| cellulose synthase catalytic subunit [UDP-forming] [Escherichia
coli 042]
gi|300395797|gb|EFJ79335.1| cellulose synthase catalytic subunit [Escherichia coli MS 69-1]
Length = 872
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|260846322|ref|YP_003224100.1| cellulose synthase BcsA, catalytic subunit [Escherichia coli
O103:H2 str. 12009]
gi|257761469|dbj|BAI32966.1| cellulose synthase BcsA, catalytic subunit [Escherichia coli
O103:H2 str. 12009]
Length = 872
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|218702298|ref|YP_002409927.1| cellulose synthase catalytic subunit [Escherichia coli IAI39]
gi|218372284|emb|CAR20147.1| cellulose synthase, catalytic subunit [Escherichia coli IAI39]
Length = 868
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 685 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 741
>gi|168759618|ref|ZP_02784625.1| cellulose synthase [Escherichia coli O157:H7 str. EC4501]
gi|217324405|ref|ZP_03440489.1| cellulose synthase [Escherichia coli O157:H7 str. TW14588]
gi|189369675|gb|EDU88091.1| cellulose synthase [Escherichia coli O157:H7 str. EC4501]
gi|217320626|gb|EEC29050.1| cellulose synthase [Escherichia coli O157:H7 str. TW14588]
Length = 872
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|89110480|ref|AP_004260.1| cellulose synthase, catalytic subunit [Escherichia coli str. K-12
substr. W3110]
gi|90111609|ref|NP_417990.4| cellulose synthase, catalytic subunit [Escherichia coli str. K-12
substr. MG1655]
gi|170018238|ref|YP_001723192.1| cellulose synthase catalytic subunit [Escherichia coli ATCC 8739]
gi|170083043|ref|YP_001732363.1| cellulose synthase, catalytic subunit [Escherichia coli str. K-12
substr. DH10B]
gi|191165298|ref|ZP_03027141.1| cellulose synthase [Escherichia coli B7A]
gi|194435867|ref|ZP_03067970.1| cellulose synthase [Escherichia coli 101-1]
gi|218556084|ref|YP_002388997.1| cellulose synthase catalytic subunit [Escherichia coli IAI1]
gi|238902622|ref|YP_002928418.1| cellulose synthase, catalytic subunit [Escherichia coli BW2952]
gi|253771636|ref|YP_003034467.1| cellulose synthase catalytic subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163455|ref|YP_003046563.1| cellulose synthase catalytic subunit [Escherichia coli B str.
REL606]
gi|256025742|ref|ZP_05439607.1| cellulose synthase catalytic subunit [Escherichia sp. 4_1_40B]
gi|260857637|ref|YP_003231528.1| cellulose synthase BcsA, catalytic subunit [Escherichia coli
O26:H11 str. 11368]
gi|260870258|ref|YP_003236660.1| cellulose synthase BcsA, catalytic subunit [Escherichia coli
O111:H- str. 11128]
gi|297516456|ref|ZP_06934842.1| cellulose synthase catalytic subunit [Escherichia coli OP50]
gi|300950870|ref|ZP_07164752.1| cellulose synthase catalytic subunit [Escherichia coli MS 116-1]
gi|300955016|ref|ZP_07167426.1| cellulose synthase catalytic subunit [Escherichia coli MS 175-1]
gi|301646043|ref|ZP_07245948.1| cellulose synthase catalytic subunit [Escherichia coli MS 146-1]
gi|307140222|ref|ZP_07499578.1| cellulose synthase catalytic subunit [Escherichia coli H736]
gi|309796171|ref|ZP_07690582.1| cellulose synthase catalytic subunit [Escherichia coli MS 145-7]
gi|312972195|ref|ZP_07786369.1| cellulose synthase, catalytic subunit [Escherichia coli 1827-70]
gi|22002035|sp|P37653|BCSA_ECOLI RecName: Full=Cellulose synthase catalytic subunit [UDP-forming]
gi|85676511|dbj|BAE77761.1| cellulose synthase, catalytic subunit [Escherichia coli str. K12
substr. W3110]
gi|87082284|gb|AAC76558.2| cellulose synthase, catalytic subunit [Escherichia coli str. K-12
substr. MG1655]
gi|169753166|gb|ACA75865.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli ATCC 8739]
gi|169890878|gb|ACB04585.1| cellulose synthase, catalytic subunit [Escherichia coli str. K-12
substr. DH10B]
gi|190904700|gb|EDV64406.1| cellulose synthase [Escherichia coli B7A]
gi|194425410|gb|EDX41394.1| cellulose synthase [Escherichia coli 101-1]
gi|218362852|emb|CAR00482.1| cellulose synthase, catalytic subunit [Escherichia coli IAI1]
gi|238860135|gb|ACR62133.1| cellulose synthase, catalytic subunit [Escherichia coli BW2952]
gi|242379051|emb|CAQ33851.1| cellulose synthase, catalytic subunit [Escherichia coli BL21(DE3)]
gi|253322680|gb|ACT27282.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253975356|gb|ACT41027.1| cellulose synthase, catalytic subunit [Escherichia coli B str.
REL606]
gi|253979512|gb|ACT45182.1| cellulose synthase, catalytic subunit [Escherichia coli BL21(DE3)]
gi|257756286|dbj|BAI27788.1| cellulose synthase BcsA, catalytic subunit [Escherichia coli
O26:H11 str. 11368]
gi|257766614|dbj|BAI38109.1| cellulose synthase BcsA, catalytic subunit [Escherichia coli
O111:H- str. 11128]
gi|260447452|gb|ACX37874.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli DH1]
gi|300318058|gb|EFJ67842.1| cellulose synthase catalytic subunit [Escherichia coli MS 175-1]
gi|300449846|gb|EFK13466.1| cellulose synthase catalytic subunit [Escherichia coli MS 116-1]
gi|301075714|gb|EFK90520.1| cellulose synthase catalytic subunit [Escherichia coli MS 146-1]
gi|308120232|gb|EFO57494.1| cellulose synthase catalytic subunit [Escherichia coli MS 145-7]
gi|309703939|emb|CBJ03280.1| cellulose synthase catalytic subunit [UDP-forming] [Escherichia
coli ETEC H10407]
gi|310334572|gb|EFQ00777.1| cellulose synthase, catalytic subunit [Escherichia coli 1827-70]
gi|315138109|dbj|BAJ45268.1| cellulose synthase catalytic subunit [Escherichia coli DH1]
gi|323154041|gb|EFZ40247.1| cellulose synthase catalytic subunit [Escherichia coli EPECa14]
gi|323179516|gb|EFZ65083.1| cellulose synthase catalytic subunit [Escherichia coli 1180]
gi|323182685|gb|EFZ68087.1| cellulose synthase catalytic subunit [Escherichia coli 1357]
gi|323934768|gb|EGB31155.1| cellulose synthase catalytic [Escherichia coli E1520]
gi|323959464|gb|EGB55121.1| cellulose synthase catalytic subunit [Escherichia coli H489]
gi|323971366|gb|EGB66606.1| cellulose synthase catalytic subunit [Escherichia coli TA007]
gi|324116596|gb|EGC10513.1| cellulose synthase catalytic subunit [Escherichia coli E1167]
gi|332345498|gb|AEE58832.1| cellulose synthase, catalytic subunit CelA [Escherichia coli
UMNK88]
Length = 872
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|301783803|ref|XP_002927319.1| PREDICTED: cell adhesion molecule 3-like [Ailuropoda melanoleuca]
Length = 409
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 18/141 (12%)
Query: 29 LFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVR 88
L D EY C + + P + + + I G + +
Sbjct: 113 LADEGEYTCSIFTM-PVRTAKSLVTVLGIPQKPII---------TGYKSSLREKETTTLN 162
Query: 89 IVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVL-----NDNTKHS 143
+S ++ A +L W +LH + R + V + + +D
Sbjct: 163 CQSSGSKP---AAQLTWRKGDQELHGEPTRVQEDPNGKTFTVSSSVTFQVSREDDGADVV 219
Query: 144 CKVIDISESGVSVSVDLQIEM 164
C V S G S +IE+
Sbjct: 220 CSVNHESLKGADRSTSQRIEV 240
>gi|281347079|gb|EFB22663.1| hypothetical protein PANDA_017079 [Ailuropoda melanoleuca]
Length = 403
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 18/141 (12%)
Query: 29 LFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVR 88
L D EY C + + P + + + I G + +
Sbjct: 107 LADEGEYTCSIFTM-PVRTAKSLVTVLGIPQKPII---------TGYKSSLREKETTTLN 156
Query: 89 IVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVL-----NDNTKHS 143
+S ++ A +L W +LH + R + V + + +D
Sbjct: 157 CQSSGSKP---AAQLTWRKGDQELHGEPTRVQEDPNGKTFTVSSSVTFQVSREDDGADVV 213
Query: 144 CKVIDISESGVSVSVDLQIEM 164
C V S G S +IE+
Sbjct: 214 CSVNHESLKGADRSTSQRIEV 234
>gi|81247308|gb|ABB68016.1| putative cellulose synthase [Shigella boydii Sb227]
Length = 886
Score = 35.2 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 703 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 759
>gi|332282094|ref|ZP_08394507.1| cellulose synthase catalytic subunit [Shigella sp. D9]
gi|332104446|gb|EGJ07792.1| cellulose synthase catalytic subunit [Shigella sp. D9]
Length = 888
Score = 35.2 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 705 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 761
>gi|300940848|ref|ZP_07155378.1| cellulose synthase catalytic subunit [Escherichia coli MS 21-1]
gi|300454406|gb|EFK17899.1| cellulose synthase catalytic subunit [Escherichia coli MS 21-1]
Length = 872
Score = 35.2 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|291284905|ref|YP_003501723.1| Cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli O55:H7 str. CB9615]
gi|290764778|gb|ADD58739.1| Cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli O55:H7 str. CB9615]
gi|320655854|gb|EFX23777.1| cellulose synthase catalytic subunit [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320666659|gb|EFX33642.1| cellulose synthase catalytic subunit [Escherichia coli O157:H7 str.
LSU-61]
Length = 872
Score = 35.2 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|161367500|ref|NP_290113.2| cellulose synthase catalytic subunit [Escherichia coli O157:H7 str.
EDL933]
Length = 872
Score = 35.2 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|38704176|ref|NP_312440.2| cellulose synthase catalytic subunit [Escherichia coli O157:H7 str.
Sakai]
gi|168746928|ref|ZP_02771950.1| cellulose synthase [Escherichia coli O157:H7 str. EC4113]
gi|168753346|ref|ZP_02778353.1| cellulose synthase [Escherichia coli O157:H7 str. EC4401]
gi|168765941|ref|ZP_02790948.1| cellulose synthase [Escherichia coli O157:H7 str. EC4486]
gi|168772512|ref|ZP_02797519.1| cellulose synthase (UDP-forming) [Escherichia coli O157:H7 str.
EC4196]
gi|168779677|ref|ZP_02804684.1| cellulose synthase [Escherichia coli O157:H7 str. EC4076]
gi|168785398|ref|ZP_02810405.1| cellulose synthase [Escherichia coli O157:H7 str. EC869]
gi|168797364|ref|ZP_02822371.1| cellulose synthase [Escherichia coli O157:H7 str. EC508]
gi|195935061|ref|ZP_03080443.1| cellulose synthase catalytic subunit [Escherichia coli O157:H7 str.
EC4024]
gi|208805987|ref|ZP_03248324.1| cellulose synthase [Escherichia coli O157:H7 str. EC4206]
gi|208813480|ref|ZP_03254809.1| cellulose synthase [Escherichia coli O157:H7 str. EC4045]
gi|208821441|ref|ZP_03261761.1| cellulose synthase [Escherichia coli O157:H7 str. EC4042]
gi|209397409|ref|YP_002273014.1| cellulose synthase [Escherichia coli O157:H7 str. EC4115]
gi|254795486|ref|YP_003080323.1| cellulose synthase catalytic subunit [Escherichia coli O157:H7 str.
TW14359]
gi|261224847|ref|ZP_05939128.1| cellulose synthase, catalytic subunit [Escherichia coli O157:H7
str. FRIK2000]
gi|261254256|ref|ZP_05946789.1| cellulose synthase, catalytic subunit [Escherichia coli O157:H7
str. FRIK966]
gi|22001535|sp|Q8X5L7|BCSA_ECO57 RecName: Full=Cellulose synthase catalytic subunit [UDP-forming]
gi|187771467|gb|EDU35311.1| cellulose synthase (UDP-forming) [Escherichia coli O157:H7 str.
EC4196]
gi|188018380|gb|EDU56502.1| cellulose synthase [Escherichia coli O157:H7 str. EC4113]
gi|189002313|gb|EDU71299.1| cellulose synthase [Escherichia coli O157:H7 str. EC4076]
gi|189358893|gb|EDU77312.1| cellulose synthase [Escherichia coli O157:H7 str. EC4401]
gi|189364505|gb|EDU82924.1| cellulose synthase [Escherichia coli O157:H7 str. EC4486]
gi|189374318|gb|EDU92734.1| cellulose synthase [Escherichia coli O157:H7 str. EC869]
gi|189380000|gb|EDU98416.1| cellulose synthase [Escherichia coli O157:H7 str. EC508]
gi|208725788|gb|EDZ75389.1| cellulose synthase [Escherichia coli O157:H7 str. EC4206]
gi|208734757|gb|EDZ83444.1| cellulose synthase [Escherichia coli O157:H7 str. EC4045]
gi|208741564|gb|EDZ89246.1| cellulose synthase [Escherichia coli O157:H7 str. EC4042]
gi|209158809|gb|ACI36242.1| cellulose synthase [Escherichia coli O157:H7 str. EC4115]
gi|254594886|gb|ACT74247.1| cellulose synthase, catalytic subunit [Escherichia coli O157:H7
str. TW14359]
gi|320191419|gb|EFW66069.1| Cellulose synthase catalytic subunit [Escherichia coli O157:H7 str.
EC1212]
gi|326337469|gb|EGD61304.1| Cellulose synthase catalytic subunit [Escherichia coli O157:H7 str.
1044]
gi|326339994|gb|EGD63801.1| Cellulose synthase catalytic subunit [Escherichia coli O157:H7 str.
1125]
Length = 872
Score = 35.2 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 745
>gi|209920993|ref|YP_002295077.1| cellulose synthase catalytic subunit [Escherichia coli SE11]
gi|331679611|ref|ZP_08380281.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli H591]
gi|209914252|dbj|BAG79326.1| putative cellulose synthase [Escherichia coli SE11]
gi|331072783|gb|EGI44108.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli H591]
Length = 888
Score = 35.2 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 705 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 761
>gi|74006343|ref|XP_853037.1| PREDICTED: similar to immunoglobulin superfamily, member 4B [Canis
familiaris]
Length = 530
Score = 35.2 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 18/141 (12%)
Query: 29 LFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVR 88
L D EY C + + P + + + I G + +
Sbjct: 234 LADEGEYTCSIFTM-PVRTAKSLVTVLGIPQKPII---------TGYKSSLREKETTTLS 283
Query: 89 IVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVL-----NDNTKHS 143
+S ++ A +L W +LH + R + V + + +D
Sbjct: 284 CQSSGSKP---AAQLTWRKGDQELHGEPTRVQEDPNGKTFTVSSSVTFQVSREDDGADIV 340
Query: 144 CKVIDISESGVSVSVDLQIEM 164
C V S G S +IE+
Sbjct: 341 CSVNHESLKGADRSTSQRIEV 361
>gi|331655160|ref|ZP_08356159.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli M718]
gi|331047175|gb|EGI19253.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli M718]
Length = 888
Score = 35.2 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 705 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 761
>gi|331675023|ref|ZP_08375780.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli TA280]
gi|331067932|gb|EGI39330.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli TA280]
Length = 888
Score = 35.2 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 705 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 761
>gi|309787502|ref|ZP_07682114.1| cellulose synthase, catalytic subunit [UDP-forming] [Shigella
dysenteriae 1617]
gi|308925080|gb|EFP70575.1| cellulose synthase, catalytic subunit [UDP-forming] [Shigella
dysenteriae 1617]
Length = 865
Score = 35.2 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 682 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILAGQKV 738
>gi|301028209|ref|ZP_07191478.1| cellulose synthase catalytic subunit [Escherichia coli MS 196-1]
gi|299878695|gb|EFI86906.1| cellulose synthase catalytic subunit [Escherichia coli MS 196-1]
Length = 888
Score = 35.2 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 705 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 761
>gi|254038712|ref|ZP_04872768.1| UDP-forming cellulose synthase catalytic subunit [Escherichia sp.
1_1_43]
gi|331644243|ref|ZP_08345372.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli H736]
gi|226839218|gb|EEH71241.1| UDP-forming cellulose synthase catalytic subunit [Escherichia sp.
1_1_43]
gi|331036537|gb|EGI08763.1| cellulose synthase catalytic subunit (UDP-forming) [Escherichia
coli H736]
Length = 888
Score = 35.2 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 705 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 761
>gi|296105264|ref|YP_003615410.1| cellulose synthase catalytic subunit [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059723|gb|ADF64461.1| cellulose synthase catalytic subunit [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 871
Score = 35.2 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEISMPAALAREDGHLFSCTVHDFSDGGLGIKINGQAKVLEGQKV 745
>gi|12518252|gb|AAG58675.1|AE005579_5 putative cellulose synthase [Escherichia coli O157:H7 str. EDL933]
Length = 888
Score = 35.2 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 705 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 761
>gi|13363887|dbj|BAB37836.1| putative cellulose synthase [Escherichia coli O157:H7 str. Sakai]
gi|209747462|gb|ACI72038.1| putative cellulose synthase [Escherichia coli]
gi|209747464|gb|ACI72039.1| putative cellulose synthase [Escherichia coli]
gi|209747466|gb|ACI72040.1| putative cellulose synthase [Escherichia coli]
Length = 888
Score = 35.2 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 705 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 761
>gi|222054947|ref|YP_002537309.1| type IV pilus assembly PilZ [Geobacter sp. FRC-32]
gi|221564236|gb|ACM20208.1| type IV pilus assembly PilZ [Geobacter sp. FRC-32]
Length = 122
Score = 35.2 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 12/83 (14%)
Query: 122 RKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN---------- 171
R +R LV +V +IS G+ + D +++ V +
Sbjct: 5 RNFSRVSFAIDALVTQAEITIKGEVRNISLQGLYIETDGKLDAGLPVDVSIQLSGTTPEV 64
Query: 172 --DILGRVVRIFPGGIAIEFSSV 192
G VVRI G+ I+FS +
Sbjct: 65 AIKATGSVVRIDENGVGIKFSKI 87
>gi|330959499|gb|EGH59759.1| hypothetical protein PMA4326_13189 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 122
Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 26/110 (23%)
Query: 118 RAYGRKITRDREVDAQLVLNDN------TKHSCKVIDISESGVSVSVDLQIEMFSKVLFN 171
R + R + + + +Q + C+V D+S +G + + + + +
Sbjct: 6 RRHTRYVISEGALLSQQIKGKGLVAALLGWADCRVRDLSIAGAMILTEKKKGIGDPISMK 65
Query: 172 DIL---------GRVVR--------IFPGGIAIEFSSVQESNIAFKSLIN 204
G+VV F GIA + Q ++
Sbjct: 66 LTQRNGDELQFEGKVVNCGTDHRSGHFQLGIA---LNEQAPETREHIFLH 112
>gi|161949977|ref|YP_405913.2| cellulose synthase catalytic subunit [Shigella dysenteriae Sd197]
Length = 872
Score = 35.2 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILAGQKV 745
>gi|291397677|ref|XP_002715327.1| PREDICTED: cell adhesion molecule 3 [Oryctolagus cuniculus]
Length = 447
Score = 35.2 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Query: 98 KLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVL-----NDNTKHSCKVIDISES 152
K A +L W +L + R + V + + +D C V S
Sbjct: 190 KPAAQLTWRKGDQELRGEPTRIQEDPNGKTFTVSSSVTFQVTREDDGANIVCSVNHESLK 249
Query: 153 GVSVSVDLQIEM 164
G S +IE+
Sbjct: 250 GADRSTSQRIEV 261
>gi|194016374|ref|ZP_03054988.1| glycosyltransferase [Bacillus pumilus ATCC 7061]
gi|194011847|gb|EDW21415.1| glycosyltransferase [Bacillus pumilus ATCC 7061]
Length = 755
Score = 35.2 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 24/96 (25%)
Query: 125 TRDREVDAQLVLNDNTKHS--------CKVIDISESGVSVSVDLQIEMFSKVLFN----- 171
R R+ + L+ D HS C ++D+S+SG +S+ L S +
Sbjct: 524 PRYRKSERFLIEKDGQLHSDHQNQSIACFLLDMSDSGARLSIPLDQA--SSLYQGQTQLF 581
Query: 172 -----DILGRVVRIFPGG----IAIEFSSVQESNIA 198
+ VV P G + + F+ Q+S
Sbjct: 582 FSEDASVACDVVWSHPEGDKLMVGVAFTDTQKSEYL 617
>gi|283851946|ref|ZP_06369222.1| type IV pilus assembly PilZ [Desulfovibrio sp. FW1012B]
gi|283572670|gb|EFC20654.1| type IV pilus assembly PilZ [Desulfovibrio sp. FW1012B]
Length = 125
Score = 35.2 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 13/90 (14%)
Query: 115 QDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF---- 170
+D R R + V D K +IS G + ++ +
Sbjct: 3 EDKRRRSRVCAQ----FDAYVYIDGEKIPVSTQNISMKGALFCPEPRLAAGRECTVVFSL 58
Query: 171 -----NDILGRVVRIFPGGIAIEFSSVQES 195
+ G +VR G+AI+F S+ ES
Sbjct: 59 AKDIKVRLKGTIVRSSHDGMAIDFESMDES 88
>gi|81243712|gb|ABB64422.1| putative cellulose synthase [Shigella dysenteriae Sd197]
Length = 888
Score = 35.2 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 705 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILAGQKV 761
>gi|170766687|ref|ZP_02901140.1| cellulose synthase [Escherichia albertii TW07627]
gi|170124125|gb|EDS93056.1| cellulose synthase [Escherichia albertii TW07627]
Length = 872
Score = 35.2 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL + + L G++
Sbjct: 689 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGVKINGQAQILEGQKV 745
>gi|103486531|ref|YP_616092.1| type IV pilus assembly PilZ [Sphingopyxis alaskensis RB2256]
gi|98976608|gb|ABF52759.1| type IV pilus assembly PilZ [Sphingopyxis alaskensis RB2256]
Length = 141
Score = 35.2 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 8/92 (8%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN-----D 172
R R R R + LN ++ D+S +G + + ++ + +
Sbjct: 51 RGAERAPVRGRARYREPGLN---PFDVELFDLSSTGFRMVTFFRPQIGKHIWVSLPGLQP 107
Query: 173 ILGRVVRIFPGGIAIEFSSVQESNIAFKSLIN 204
+ V R EF ++A IN
Sbjct: 108 LEAVVRRADGNNYGCEFVHPLHPSVAKHLQIN 139
>gi|313647614|gb|EFS12064.1| cellulose synthase catalytic subunit [UDP-forming] domain protein
[Shigella flexneri 2a str. 2457T]
gi|332750036|gb|EGJ80448.1| cellulose synthase catalytic subunit domain protein [Shigella
flexneri K-671]
gi|332750193|gb|EGJ80604.1| cellulose synthase catalytic subunit domain protein [Shigella
flexneri 4343-70]
gi|332751146|gb|EGJ81549.1| cellulose synthase catalytic subunit domain protein [Shigella
flexneri 2747-71]
gi|332763463|gb|EGJ93702.1| pilZ domain protein [Shigella flexneri 2930-71]
gi|332997334|gb|EGK16950.1| cellulose synthase catalytic subunit domain protein [Shigella
flexneri K-218]
gi|333012368|gb|EGK31749.1| cellulose synthase catalytic subunit domain protein [Shigella
flexneri K-304]
Length = 345
Score = 35.2 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 162 SVESKQVRRSNRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 218
>gi|116251727|ref|YP_767565.1| hypothetical protein RL1963 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256375|emb|CAK07456.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 134
Score = 35.2 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 25/58 (43%), Gaps = 7/58 (12%)
Query: 140 TKHSCKVIDISESGVSVSVDLQI--EMFSKVLF-----NDILGRVVRIFPGGIAIEFS 190
++ +++D+S +G ++ + + SKV + G + G + I+F
Sbjct: 28 SQVDARILDLSLTGAALEMKGPLHAASGSKVRIEAENLGLLEGIIRWKHNGRVGIQFD 85
>gi|254466026|ref|ZP_05079437.1| Type IV pilus assembly protein PilZ [Rhodobacterales bacterium Y4I]
gi|206686934|gb|EDZ47416.1| Type IV pilus assembly protein PilZ [Rhodobacterales bacterium Y4I]
Length = 295
Score = 35.2 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Query: 137 NDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN----DILGRVVRIFPGGIAIEFS 190
++D+S +G V D E+ S+V + V ++FS
Sbjct: 203 AGGRTVPAHLVDLSRAGAKVRPDAPCEIPSRVTLTFGGYTLDASVRWQTADYFGVKFS 260
>gi|149184738|ref|ZP_01863056.1| sensory box/GGDEF family protein [Erythrobacter sp. SD-21]
gi|148832058|gb|EDL50491.1| sensory box/GGDEF family protein [Erythrobacter sp. SD-21]
Length = 710
Score = 35.2 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 10/101 (9%)
Query: 110 DDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSK-- 167
+ + RA R + R V D+ +++ + +IS+SG V + + +
Sbjct: 571 EPRGPEKYRAERRTVLRKIGVIH-----DDHRYTVVLRNISKSGARVEGLGNVPVGTDFV 625
Query: 168 VLFND---ILGRVVRIFPGGIAIEFSSVQESNIAFKSLINH 205
V D + V R + +EF + S+ A H
Sbjct: 626 VDLGDGQLAVATVRRSHKHVLGLEFETPLISDGADGLCTRH 666
>gi|222085748|ref|YP_002544278.1| hypothetical protein Arad_2071 [Agrobacterium radiobacter K84]
gi|221723196|gb|ACM26352.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 119
Score = 35.2 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Query: 140 TKHSCKVIDISESGVSVS--VDLQIEMFSKVLF-----NDILGRVVRIFPGGIAIEFSSV 192
+ +V+D+S SG+++ + SKV + G V + G I IEF
Sbjct: 36 KAVTGRVVDLSASGIALDLQAPIHAAAGSKVRVECTDIGMLDGIVRWVHSGRIGIEFDPS 95
Query: 193 QESNIAFKS 201
++ S
Sbjct: 96 SNASALVAS 104
>gi|189424016|ref|YP_001951193.1| type IV pilus assembly PilZ [Geobacter lovleyi SZ]
gi|189420275|gb|ACD94673.1| type IV pilus assembly PilZ [Geobacter lovleyi SZ]
Length = 124
Score = 35.2 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 25/80 (31%), Gaps = 12/80 (15%)
Query: 122 RKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSK----VLFNDI---- 173
RK +R KV ++S +G+ + ++ +
Sbjct: 4 RKFSRVPFHVTATATVGGRSFQGKVSNLSMNGLFLETAERLPEGQAADLVISLEGTEPEI 63
Query: 174 ----LGRVVRIFPGGIAIEF 189
LGRV RI GI F
Sbjct: 64 AVAFLGRVCRITEDGIGFHF 83
>gi|240138970|ref|YP_002963445.1| methyl-accepting chemotaxis receptor/sensory transducer with PAS
domain [Methylobacterium extorquens AM1]
gi|240008942|gb|ACS40168.1| methyl-accepting chemotaxis receptor/sensory transducer with PAS
domain [Methylobacterium extorquens AM1]
Length = 654
Score = 35.2 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 141 KHSCKVIDISESGV--SVSVDLQIEMFSKVLFN--DILGRVVRIFPGGIAIEFS 190
C V+++SE G ++ E+ + + RV+R GI ++F
Sbjct: 601 SRPCTVLNLSEGGAKLALEAADLPEVVTLHIDGEPSRRCRVIRRAADGIGVQFV 654
>gi|104783503|ref|YP_610001.1| alginate biosynthesis protein Alg44 [Pseudomonas entomophila L48]
gi|95112490|emb|CAK17217.1| alginate biosynthesis protein Alg44 [Pseudomonas entomophila L48]
Length = 388
Score = 35.2 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF 56
QR RV++ K R+L + + V ++S GGL +
Sbjct: 16 QRQHARVRIPAKLRYLDGNREPHEVKVDDLSAGGLSFHAKKALP 59
>gi|294010766|ref|YP_003544226.1| hypothetical protein SJA_C1-07800 [Sphingobium japonicum UT26S]
gi|292674096|dbj|BAI95614.1| hypothetical protein SJA_C1-07800 [Sphingobium japonicum UT26S]
Length = 98
Score = 35.2 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 22/88 (25%), Gaps = 4/88 (4%)
Query: 119 AYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDI----L 174
R R + + +D+S G + + ++ +
Sbjct: 8 GERRLEPRRKMFGPVALRFGGMAARAHFLDLSCWGALAYCETPPGQGAYLVVEALGVQAS 67
Query: 175 GRVVRIFPGGIAIEFSSVQESNIAFKSL 202
RV+ I+FS +
Sbjct: 68 ARVIWANGKRFGIQFSQPLTQEAMDAWI 95
>gi|114704565|ref|ZP_01437473.1| DNA topoisomerase IV subunit B [Fulvimarina pelagi HTCC2506]
gi|114539350|gb|EAU42470.1| DNA topoisomerase IV subunit B [Fulvimarina pelagi HTCC2506]
Length = 675
Score = 35.2 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 75 KVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQL 134
++V + + + +S + +L + W+ ++ D L R ++++R + +L
Sbjct: 386 RIVEQSIRDSFDIWLASSPQDAARL---IDWVLDRADERL--RRRQEKEVSR-KSATRKL 439
Query: 135 VLNDNTKHSCKVIDISESGVS 155
L K+ D S+SG +
Sbjct: 440 RL------PGKLADCSQSGAA 454
>gi|307945028|ref|ZP_07660364.1| hypothetical protein TRICHSKD4_3701 [Roseibium sp. TrichSKD4]
gi|307770901|gb|EFO30126.1| hypothetical protein TRICHSKD4_3701 [Roseibium sp. TrichSKD4]
Length = 382
Score = 34.9 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Query: 110 DDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVL 169
D L + + + R + + + + I +S+ G + + + ++ SKV
Sbjct: 199 DPLRVYENKRLVRYGPDFPAIVFFIRDPFGDVVAMQRIFLSQDGRKLETE-RPDLDSKVT 257
Query: 170 FNDILGRVVRIFPGGIAIEFSSVQE 194
+ G V RI G + E
Sbjct: 258 YGSYAGGVCRIGGDGPRVGLMEGPE 282
>gi|171057946|ref|YP_001790295.1| type IV pilus assembly PilZ [Leptothrix cholodnii SP-6]
gi|170775391|gb|ACB33530.1| type IV pilus assembly PilZ [Leptothrix cholodnii SP-6]
Length = 122
Score = 34.9 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 24/57 (42%)
Query: 1 MYRGIHNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFL 57
M G ID R R V+ R L +G VR+IS GL + C+ P+
Sbjct: 1 MSTGPLAQGSIDNRREPRYTVNWPARLDLGNGQLVEVKVRDISESGLGLRCERPLPE 57
Score = 34.5 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 116 DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF 170
D R R A+L L + KV DISESG+ + + + +++
Sbjct: 12 DNRREPRYTVNWP---ARLDLGNGQLVEVKVRDISESGLGLRCERPLPEHARLKI 63
>gi|312199354|ref|YP_004019415.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EuI1c]
gi|311230690|gb|ADP83545.1| L-carnitine dehydratase/bile acid-inducible protein F [Frankia sp.
EuI1c]
Length = 830
Score = 34.9 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Query: 29 LFD--GTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIE--GKVVNFDSNRG 84
L D + C + + G + D + +G+ V+ VG++E G +V N G
Sbjct: 733 LPDFEKRDLPCELS-VDTFGAALFTDPALRRLGDVVTAQVDGVGKLEQTGVLVRLTENPG 791
Query: 85 YAVR--IVTSENERRKLAD 101
+ E+ R LA+
Sbjct: 792 VVAGPPCLAGEHSRDILAE 810
>gi|119477391|ref|ZP_01617582.1| hypothetical protein GP2143_00417 [marine gamma proteobacterium
HTCC2143]
gi|119449317|gb|EAW30556.1| hypothetical protein GP2143_00417 [marine gamma proteobacterium
HTCC2143]
Length = 91
Score = 34.9 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 11 IDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERSIVFVEKV 69
+QR R K+ R D +IS GG I + + GE V + V
Sbjct: 4 TNQRQHIRTKLRAGIRLSHADVGSLKLRTADISDGGAYIFSEGNSLPNTGEVVYVQILGV 63
Query: 70 GRIEG-----KVVNFDSNRGYAVRI 89
G E K+V D RG +
Sbjct: 64 GGDEAPLVKMKIVR-DDGRGIGLEF 87
>gi|332529636|ref|ZP_08405592.1| cellulose synthase catalytic subunit [Hylemonella gracilis ATCC
19624]
gi|332040986|gb|EGI77356.1| cellulose synthase catalytic subunit [Hylemonella gracilis ATCC
19624]
Length = 893
Score = 34.9 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 14/43 (32%)
Query: 14 RAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF 56
R RV + L DG C + S GGL +
Sbjct: 703 RRTHRVDMRLPAALRRPDGQLLRCETEDFSEGGLSLTVPAKQG 745
>gi|240138246|ref|YP_002962718.1| putative Methyl-accepting chemotaxis receptor/sensory transducer
[Methylobacterium extorquens AM1]
gi|240008215|gb|ACS39441.1| putative Methyl-accepting chemotaxis receptor/sensory transducer
[Methylobacterium extorquens AM1]
Length = 581
Score = 34.9 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 10/95 (10%)
Query: 97 RKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSV 156
LA + + L++ R R +A + +HS ++ ++S G +
Sbjct: 471 ADLARSVTQFVQRVTTDLEERRGTVRVA----VDEAAFLHVRGRRHSVRLAEVSSHGARI 526
Query: 157 SVDLQIEMFSKVLF-----NDILGRVVRIFPGGIA 186
+ Q+ V F V GG A
Sbjct: 527 AGAPQLAPGEAVEFETTDGGRTPAAVA-WSEGGTA 560
>gi|295676142|ref|YP_003604666.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
sp. CCGE1002]
gi|295435985|gb|ADG15155.1| cellulose synthase catalytic subunit (UDP-forming) [Burkholderia
sp. CCGE1002]
Length = 843
Score = 34.9 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI 49
+ R R+ + LL DG+ C + S GGL +
Sbjct: 689 EAKQVRVTHRIAMRAAATLLLADGSTLACTTSDYSTGGLGL 729
>gi|46578986|ref|YP_009794.1| hypothetical protein DVU0572 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603423|ref|YP_967823.1| type IV pilus assembly PilZ [Desulfovibrio vulgaris DP4]
gi|46448399|gb|AAS95053.1| hypothetical protein DVU_0572 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120563652|gb|ABM29396.1| type IV pilus assembly PilZ [Desulfovibrio vulgaris DP4]
gi|311232837|gb|ADP85691.1| type IV pilus assembly PilZ [Desulfovibrio vulgaris RCH1]
Length = 112
Score = 34.9 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 32/100 (32%), Gaps = 17/100 (17%)
Query: 114 LQDCRAYGRKITRDREVDAQL-VLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFND 172
+++ R + R R D V+ + + +++DIS G S+ ++
Sbjct: 1 MEERREHQRLYLRHYGTDYSYQVMVGGRETAARLLDISLGGARFSMREPLQYAEPGDAGS 60
Query: 173 ILG----------------RVVRIFPGGIAIEFSSVQESN 196
++G V + F + + +
Sbjct: 61 VVGPSRAPEYAGYFREVGYTVAWCEGEQFGVVFDTPLQRD 100
>gi|238787723|ref|ZP_04631520.1| Cellulose synthase catalytic subunit [UDP-forming] [Yersinia
frederiksenii ATCC 33641]
gi|238724066|gb|EEQ15709.1| Cellulose synthase catalytic subunit [UDP-forming] [Yersinia
frederiksenii ATCC 33641]
Length = 753
Score = 34.9 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI 49
++ R RV++ + DG ++C + + S GG+ I
Sbjct: 570 AVEAKQVRQSHRVEIAMPAAVARADGHLFSCTLLDYSDGGVGI 612
>gi|315453180|ref|YP_004073450.1| riboflavin synthase alpha chain [Helicobacter felis ATCC 49179]
gi|315132232|emb|CBY82860.1| riboflavin synthase alpha chain [Helicobacter felis ATCC 49179]
Length = 205
Score = 34.9 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 156 VSVDLQIEMFSKVLFNDILGRVVRIFPGGIAIEFS-SVQESNIAFKSL 202
+ D + ++ + N V+R+F GG A+E S Q+S +
Sbjct: 22 ILSDYRPKLGDSIAVNGACLTVIRLFKGGFALELSAHTQKSIALENYV 69
>gi|261342013|ref|ZP_05969871.1| cellulose synthase catalytic subunit [Enterobacter cancerogenus
ATCC 35316]
gi|288315930|gb|EFC54868.1| cellulose synthase catalytic subunit [Enterobacter cancerogenus
ATCC 35316]
Length = 871
Score = 34.9 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V + S GGL I + L G++
Sbjct: 689 SVESKQVRRAHRVEISMPAAIAREDGHLFSCTVHDFSDGGLGIKINGQAKVLEGQKV 745
>gi|39935588|ref|NP_947864.1| hypothetical protein RPA2522 [Rhodopseudomonas palustris CGA009]
gi|192291177|ref|YP_001991782.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris TIE-1]
gi|39649441|emb|CAE27963.1| hypothetical protein RPA2522 [Rhodopseudomonas palustris CGA009]
gi|192284926|gb|ACF01307.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris TIE-1]
Length = 85
Score = 34.9 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 134 LVLNDN-TKHSCKVIDISESGVSVSVDLQIEMFSKVLFN-------DILGRVVRIFPGGI 185
+ L+ C+V+D+S SG + ++ + S++ VV +
Sbjct: 20 ITLDGGFAARPCEVLDLSSSGAKLVLNEAESLGSRLRLGFSRDARQGRQCEVVWRRGTTL 79
Query: 186 AIEFSS 191
++F +
Sbjct: 80 GVKFVN 85
>gi|126664670|ref|ZP_01735654.1| predicted signal transduction protein containing a membrane
domain, an EAL and a GGDEF domain [Marinobacter sp.
ELB17]
gi|126630996|gb|EBA01610.1| predicted signal transduction protein containing a membrane
domain, an EAL and a GGDEF domain [Marinobacter sp.
ELB17]
Length = 1266
Score = 34.9 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 8 LQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPM 55
++ I++R+ R + L + L G + C + + GL I +
Sbjct: 1 MESIERRSSLRKPIKLAAQLDLGRGENWPCQIADFCAEGLFIRYSQAV 48
>gi|269140725|ref|YP_003297426.1| cellulose synthase catalytic subunit [Edwardsiella tarda EIB202]
gi|267986386|gb|ACY86215.1| cellulose synthase catalytic subunit [Edwardsiella tarda EIB202]
Length = 765
Score = 34.9 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPM--FLVGERSIV 64
++ R RV + + + DG Y C +R+ S GG+ I GE +
Sbjct: 591 AVEVRQIRQAHRVDIAMPAILMRHDGHLYPCTLRDYSDGGVGIELADERLCLREGESISL 650
Query: 65 FVE 67
++
Sbjct: 651 LLQ 653
>gi|323160571|gb|EFZ46512.1| pilZ domain protein [Escherichia coli E128010]
Length = 225
Score = 34.9 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDV-PMFLVGERS 62
+++ R RV++ + DG ++C V++ S GGL I + L G++
Sbjct: 42 SVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKV 98
>gi|254561578|ref|YP_003068673.1| methyl-accepting chemotaxis receptor/sensory transducer with PAS
domain [Methylobacterium extorquens DM4]
gi|254268856|emb|CAX24817.1| methyl-accepting chemotaxis receptor/sensory transducer with PAS
domain [Methylobacterium extorquens DM4]
Length = 654
Score = 34.9 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 141 KHSCKVIDISESGV--SVSVDLQIEMFSKVLFN--DILGRVVRIFPGGIAIEFS 190
C V+++SE G ++ + + + RV+R GI ++F
Sbjct: 601 SRPCTVLNLSEGGAKLALEAADLPNLVTLHIDGEPSRRCRVIRRADDGIGVQFV 654
>gi|304560506|gb|ADM43170.1| Cellulose synthase catalytic subunit [Edwardsiella tarda FL6-60]
Length = 855
Score = 34.9 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPM--FLVGERSIV 64
++ R RV + + + DG Y C +R+ S GG+ I GE +
Sbjct: 681 AVEVRQIRQAHRVDIAMPAILMRHDGHLYPCTLRDYSDGGVGIELADERLCLREGESISL 740
Query: 65 FVE 67
++
Sbjct: 741 LLQ 743
>gi|258653229|ref|YP_003202385.1| extracellular ligand-binding receptor [Nakamurella multipartita DSM
44233]
gi|258556454|gb|ACV79396.1| Extracellular ligand-binding receptor [Nakamurella multipartita DSM
44233]
Length = 425
Score = 34.9 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 126 RDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDILGRV 177
+ V LV K C + D S G ++ ++ + S V G+V
Sbjct: 217 QGPSVGKYLVNTLGYKKVCVIDDSSSYGAGLAAEVTPALGSAVD-GGCTGQV 267
>gi|157370807|ref|YP_001478796.1| YcgR family protein [Serratia proteamaculans 568]
gi|300681201|sp|A8GEX8|YCGR_SERP5 RecName: Full=Flagellar brake protein YcgR; AltName: Full=Cyclic
di-GMP binding protein YcgR
gi|157322571|gb|ABV41668.1| YcgR family protein [Serratia proteamaculans 568]
Length = 237
Score = 34.9 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 6 HNLQFIDQRAFQRV------KVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFL 57
L +I +R RV + G + DG+EY + ++S GG+ + D P+
Sbjct: 102 KELIYIQRRRQFRVTTPHWREFLCSGEY--ADGSEYQLRIHDLSAGGVGLRVDGPLPE 157
>gi|322830853|ref|YP_004210880.1| YcgR family protein [Rahnella sp. Y9602]
gi|321166054|gb|ADW71753.1| YcgR family protein [Rahnella sp. Y9602]
Length = 248
Score = 34.9 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 8 LQFIDQRAFQRVKVDLKGRF----LLFDGTEYNCIVREISPGGLCIVCDVPMF 56
L FI +R + RV V F +L D +E+ VR+IS GGL + +
Sbjct: 111 LYFIQRREYFRVSVPRMSDFRCSGILPDSSEFAYRVRDISLGGLGLEIEGATP 163
>gi|254384260|ref|ZP_04999603.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194343148|gb|EDX24114.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 458
Score = 34.9 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 28/92 (30%), Gaps = 9/92 (9%)
Query: 70 GRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDRE 129
G +E V+ G A+ + R L A L R R
Sbjct: 212 GVLEATVMRLRDPSGGAITVE-----RPYLPFTPTEFARARALVE----LDARLGPRVPR 262
Query: 130 VDAQLVLNDNTKHSCKVIDISESGVSVSVDLQ 161
L L + + + + D S+ + ++ +
Sbjct: 263 SHDVLTLPEGNEITVRRADGSDQAAARAMHDR 294
>gi|320012857|gb|ADW07707.1| putative PAS/PAC sensor protein [Streptomyces flavogriseus ATCC
33331]
Length = 549
Score = 34.9 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 37/127 (29%), Gaps = 11/127 (8%)
Query: 63 IVFVEKVGRIEGKVVNFDSNRGYAVRIVTSE-----NERRKLADKLIWLANKDDLHLQDC 117
+ V I VV+ D + +E R +L ++ + DL
Sbjct: 89 VDRFRHVKIIAAPVVDEDGEVEFVGTTTDAEEHWRGRMRERLLARMAAVPAARDLSEAFL 148
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISES------GVSVSVDLQIEMFSKVLFN 171
+ + A L D + + D + G++ + + + +
Sbjct: 149 TTAAAVVPELADAVAIFRLVDGVEAGVRPTDAPAATSPERVGLAPGLPSLPPLDAAFVLG 208
Query: 172 DILGRVV 178
+ R V
Sbjct: 209 PVAQRAV 215
>gi|289209665|ref|YP_003461731.1| type IV pilus assembly PilZ [Thioalkalivibrio sp. K90mix]
gi|288945296|gb|ADC72995.1| type IV pilus assembly PilZ [Thioalkalivibrio sp. K90mix]
Length = 197
Score = 34.9 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 46/140 (32%), Gaps = 19/140 (13%)
Query: 59 GERSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCR 118
G+ ++++G E V + D YA S N R A W + + R
Sbjct: 56 GQLVEAVIDRLG--EPPVADPDQADLYA----CSPNPRHWSAA-FAWRYGRMTPGRPEQR 108
Query: 119 AYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQ---IEMFSKVLF----- 170
+ R + + + C+++D+S G + + Q + + +
Sbjct: 109 CWPRYA-VNLLTEIGIRKE---WRKCRLMDLSRGGARIVLVGQYPYLPPETTLQLVLPTA 164
Query: 171 NDILGRVVRIFPGGIAIEFS 190
VV G+ + F
Sbjct: 165 GTFDAVVVSDRRVGLGLRFL 184
>gi|224826892|ref|ZP_03699991.1| betaine aldehyde dehydrogenase [Lutiella nitroferrum 2002]
gi|224600879|gb|EEG07063.1| betaine aldehyde dehydrogenase [Lutiella nitroferrum 2002]
Length = 487
Score = 34.9 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 19/106 (17%)
Query: 50 VCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANK 109
+ D GE I V++ G E ++ + +G+ V + ER ++ N+
Sbjct: 22 LVDNINPATGE-VICRVQQAGEAEVQLAIEAARQGFEVWSAMTGAERGRI-------LNR 73
Query: 110 DDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHS-CKVIDISESGV 154
L++ R+RE+ V ++ +V+D+ SG
Sbjct: 74 AVQILRE---------RNRELAELEVRDNGKPIQEAEVVDV-LSGA 109
>gi|323135977|ref|ZP_08071060.1| type IV pilus assembly PilZ [Methylocystis sp. ATCC 49242]
gi|322399068|gb|EFY01587.1| type IV pilus assembly PilZ [Methylocystis sp. ATCC 49242]
Length = 99
Score = 34.9 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 22/79 (27%), Gaps = 4/79 (5%)
Query: 113 HLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFND 172
+ + R R + CKVIDIS G + + +
Sbjct: 15 PVDERRTAARLKAYAEAWADPGGME--PAIPCKVIDISGGGAKLDCQATLPERFTLHVGA 72
Query: 173 I--LGRVVRIFPGGIAIEF 189
V+ + +EF
Sbjct: 73 AKHAAHVIWRRQTQVGVEF 91
>gi|315499117|ref|YP_004087921.1| type IV pilus assembly pilz [Asticcacaulis excentricus CB 48]
gi|315417129|gb|ADU13770.1| type IV pilus assembly PilZ [Asticcacaulis excentricus CB 48]
Length = 168
Score = 34.9 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 115 QDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDIL 174
Q+ RA R + A L++ + +C++++ S SG V V + D+
Sbjct: 47 QNRRAEPRF--DCKAKGALLLVPGGAEVACEIVNQSASGAQVLVKDMPHKAGDLWLLDVS 104
Query: 175 GRVVR------IFPGGIAIEFSSVQESNI 197
G++V+ P + + FS Q+ +
Sbjct: 105 GQMVKFGSPVWTQPHKMGLRFSFAQKVDP 133
>gi|316934329|ref|YP_004109311.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris DX-1]
gi|315602043|gb|ADU44578.1| type IV pilus assembly PilZ [Rhodopseudomonas palustris DX-1]
Length = 85
Score = 34.9 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 134 LVLNDN-TKHSCKVIDISESGVSVSVDLQIEMFSKVLFN-------DILGRVVRIFPGGI 185
+ L+ C+V+D+S SG + ++ + +++ VV +
Sbjct: 20 ITLDGGFAARPCEVLDLSSSGAKLVLNEAESLGARLRLGFSRDARQGRQCEVVWRRGTTL 79
Query: 186 AIEFSS 191
++F +
Sbjct: 80 GVKFVN 85
>gi|260774037|ref|ZP_05882952.1| hypothetical protein VIB_002516 [Vibrio metschnikovii CIP 69.14]
gi|260610998|gb|EEX36202.1| hypothetical protein VIB_002516 [Vibrio metschnikovii CIP 69.14]
Length = 251
Score = 34.9 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 13/104 (12%)
Query: 7 NLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCD--VPMFLVGERSIV 64
+Q R R +V+L R + C VR++S G + + VG+ +
Sbjct: 129 TMQVTQLRQEPRYEVNLAARVTCENQR-SECEVRDLSKNGCRFITPPLSRHWQVGDHVSI 187
Query: 65 FVEK-------VGRIEGKV---VNFDSNRGYAVRIVTSENERRK 98
+ + G++ + Y ++ S E K
Sbjct: 188 DISTERQHSQVFSPLTGRICNLQRSIHHVRYGLKFDESGRESAK 231
>gi|77163749|ref|YP_342274.1| hypothetical protein Noc_0214 [Nitrosococcus oceani ATCC 19707]
gi|76882063|gb|ABA56744.1| hypothetical protein Noc_0214 [Nitrosococcus oceani ATCC 19707]
Length = 115
Score = 34.9 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 16/90 (17%)
Query: 116 DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDL-------------QI 162
+ R R R V L C+V ++S +G + V +
Sbjct: 29 ERRQNSR---RQSAVKVYLSWPGQESQCCRVKNLSATGAFIEVGALRIPEDRIIKLAFVL 85
Query: 163 EMFSKVLFNDILGRVVRIFPGGIAIEFSSV 192
+ S + + + VV G+ + F V
Sbjct: 86 PINSLIKIHRLSAIVVHRSHQGLGLMFQQV 115
>gi|78221489|ref|YP_383236.1| hypothetical protein Gmet_0266 [Geobacter metallireducens GS-15]
gi|78192744|gb|ABB30511.1| hypothetical protein Gmet_0266 [Geobacter metallireducens GS-15]
Length = 130
Score = 34.9 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 18/90 (20%)
Query: 116 DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFN---- 171
+ R + R + D+ +V DIS G+ +S+ E + L +
Sbjct: 5 ERRRHPRVPFSAPAFLEK----DSRITYGEVRDISHHGLFLSMRGDCEPGKEALVSIYFL 60
Query: 172 --------DILGRVVRIFPGGIAIEFSSVQ 193
+ GR+VR GI F+S
Sbjct: 61 SGTSTLTITMPGRIVRTASNGIG--FASPH 88
>gi|78357980|ref|YP_389429.1| hypothetical protein Dde_2940 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220385|gb|ABB39734.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 222
Score = 34.9 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 8 LQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFL------VGER 61
++ +D R +RV L G+ EY C++ ++SPGG +V DV VG+
Sbjct: 106 VEQLDLRQHRRVDCLLPGKV-HCRHGEYRCVLADLSPGGGKVVLDVKASDPVKSLGVGDM 164
Query: 62 SIVFV 66
I+ +
Sbjct: 165 LILRL 169
>gi|154250997|ref|YP_001411821.1| trehalose synthase [Parvibaculum lavamentivorans DS-1]
gi|154154947|gb|ABS62164.1| trehalose synthase [Parvibaculum lavamentivorans DS-1]
Length = 1061
Score = 34.5 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 83 RGY-AVRIVTSENERRKLADKLIWLANKDDLHLQDC---RAYGRKI-TRDREVDAQLVLN 137
G+ AV + E +R L L WL + + R R + +R+V A L +
Sbjct: 431 YGFQAVNVEAQERDRHSL---LNWLKRMLAVRREHRAFGRGAQRFLRPANRKVLAYLREH 487
Query: 138 DNTKHSCKVIDISESGVSVSVDL 160
D C V ++S + +V +DL
Sbjct: 488 DGDIILC-VANLSRTAQAVELDL 509
>gi|240137644|ref|YP_002962115.1| putative Cellulose synthase (UDP-forming) [Methylobacterium
extorquens AM1]
gi|240007612|gb|ACS38838.1| putative Cellulose synthase (UDP-forming) [Methylobacterium
extorquens AM1]
Length = 651
Score = 34.5 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 16 FQRVKVDLKGRFLLFDGTE-----YNCIVREISPGGLCIV-CDVPMFLVGERSIVFVEKV 69
F+ +VDL R+ E + C + +SPG + P+ VG I+ + +
Sbjct: 535 FEYPRVDLAFRYDADARIEAGGTSHACRIATLSPGRATLAEAGEPVSAVGAPLILHLPGI 594
Query: 70 GRIEG 74
G I+
Sbjct: 595 GAIDA 599
>gi|114560550|ref|XP_513915.2| PREDICTED: cell adhesion molecule 3 isoform 4 [Pan troglodytes]
gi|297663064|ref|XP_002810003.1| PREDICTED: cell adhesion molecule 3-like isoform 2 [Pongo abelii]
Length = 396
Score = 34.5 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 18/141 (12%)
Query: 29 LFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVR 88
L D EY C + + P + + + I G + +
Sbjct: 100 LADEGEYTCSIFTM-PVRTAKSLVTVLGIPQKPII---------TGYKSSLREKDTATLN 149
Query: 89 IVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVL-----NDNTKHS 143
+S ++ A +L W +LH + R + V + + +D
Sbjct: 150 CQSSGSKP---AARLTWRKGDQELHGEPTRIQEDPNGKTFTVSSSVTFQVTREDDGASIV 206
Query: 144 CKVIDISESGVSVSVDLQIEM 164
C V S G S +IE+
Sbjct: 207 CSVNHESLKGADRSTSQRIEV 227
>gi|114560554|ref|XP_001170484.1| PREDICTED: immunoglobulin superfamily, member 4B isoform 2 [Pan
troglodytes]
Length = 374
Score = 34.5 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 18/141 (12%)
Query: 29 LFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVR 88
L D EY C + + P + + + I G + +
Sbjct: 78 LADEGEYTCSIFTM-PVRTAKSLVTVLGIPQKPII---------TGYKSSLREKDTATLN 127
Query: 89 IVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVL-----NDNTKHS 143
+S ++ A +L W +LH + R + V + + +D
Sbjct: 128 CQSSGSKP---AARLTWRKGDQELHGEPTRIQEDPNGKTFTVSSSVTFQVTREDDGASIV 184
Query: 144 CKVIDISESGVSVSVDLQIEM 164
C V S G S +IE+
Sbjct: 185 CSVNHESLKGADRSTSQRIEV 205
>gi|114560548|ref|XP_001170513.1| PREDICTED: cell adhesion molecule 3 isoform 3 [Pan troglodytes]
gi|297663062|ref|XP_002810002.1| PREDICTED: cell adhesion molecule 3-like isoform 1 [Pongo abelii]
Length = 430
Score = 34.5 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 18/141 (12%)
Query: 29 LFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVR 88
L D EY C + + P + + + I G + +
Sbjct: 134 LADEGEYTCSIFTM-PVRTAKSLVTVLGIPQKPII---------TGYKSSLREKDTATLN 183
Query: 89 IVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVL-----NDNTKHS 143
+S ++ A +L W +LH + R + V + + +D
Sbjct: 184 CQSSGSKP---AARLTWRKGDQELHGEPTRIQEDPNGKTFTVSSSVTFQVTREDDGASIV 240
Query: 144 CKVIDISESGVSVSVDLQIEM 164
C V S G S +IE+
Sbjct: 241 CSVNHESLKGADRSTSQRIEV 261
>gi|187608363|ref|NP_001120645.1| cell adhesion molecule 3 isoform 2 [Homo sapiens]
gi|74759761|sp|Q8N126|CADM3_HUMAN RecName: Full=Cell adhesion molecule 3; AltName: Full=Brain
immunoglobulin receptor; AltName: Full=Immunoglobulin
superfamily member 4B; Short=IgSF4B; AltName:
Full=Nectin-like protein 1; Short=NECL-1; AltName:
Full=Synaptic cell adhesion molecule 3; AltName:
Full=TSLC1-like protein 1; Flags: Precursor
gi|21518636|gb|AAM60749.1|AF363367_1 TSLC1-like 1 [Homo sapiens]
gi|15636798|gb|AAL02143.1| brain immunoglobulin receptor precursor [Homo sapiens]
gi|21708058|gb|AAH33819.1| CADM3 protein [Homo sapiens]
gi|37181789|gb|AAQ88698.1| GAPA225 [Homo sapiens]
gi|55957142|emb|CAI17894.1| cell adhesion molecule 3 [Homo sapiens]
gi|119573177|gb|EAW52792.1| immunoglobulin superfamily, member 4B, isoform CRA_a [Homo sapiens]
gi|123979890|gb|ABM81774.1| immunoglobulin superfamily, member 4B [synthetic construct]
gi|123994653|gb|ABM84928.1| immunoglobulin superfamily, member 4B [synthetic construct]
Length = 398
Score = 34.5 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 18/141 (12%)
Query: 29 LFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVR 88
L D EY C + + P + + + I G + +
Sbjct: 102 LADEGEYTCSIFTM-PVRTAKSLVTVLGIPQKPII---------TGYKSSLREKDTATLN 151
Query: 89 IVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVL-----NDNTKHS 143
+S ++ A +L W +LH + R + V + + +D
Sbjct: 152 CQSSGSKP---AARLTWRKGDQELHGEPTRIQEDPNGKTFTVSSSVTFQVTREDDGASIV 208
Query: 144 CKVIDISESGVSVSVDLQIEM 164
C V S G S +IE+
Sbjct: 209 CSVNHESLKGADRSTSQRIEV 229
>gi|11056046|ref|NP_067012.1| cell adhesion molecule 3 isoform 1 [Homo sapiens]
gi|5918159|emb|CAB56227.1| cell adhesion molecule 3 [Homo sapiens]
gi|13631547|gb|AAD17540.2| nectin-like protein 1 [Homo sapiens]
gi|52426495|gb|AAU47274.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426499|gb|AAU47277.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426503|gb|AAU47280.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426507|gb|AAU47283.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426511|gb|AAU47286.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426515|gb|AAU47289.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426519|gb|AAU47292.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426523|gb|AAU47295.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426527|gb|AAU47298.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426531|gb|AAU47301.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426535|gb|AAU47304.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426539|gb|AAU47307.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426543|gb|AAU47310.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426547|gb|AAU47313.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426551|gb|AAU47316.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426555|gb|AAU47319.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426559|gb|AAU47322.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|52426563|gb|AAU47325.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483306|gb|ABA10402.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483310|gb|ABA10405.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483314|gb|ABA10408.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483318|gb|ABA10411.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483322|gb|ABA10414.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483326|gb|ABA10417.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483330|gb|ABA10420.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483334|gb|ABA10423.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483338|gb|ABA10426.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483342|gb|ABA10429.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483346|gb|ABA10432.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483350|gb|ABA10435.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483354|gb|ABA10438.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483358|gb|ABA10441.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|74483362|gb|ABA10444.1| immunoglobulin superfamily member 4B [Homo sapiens]
gi|119573179|gb|EAW52794.1| immunoglobulin superfamily, member 4B, isoform CRA_c [Homo sapiens]
gi|158260105|dbj|BAF82230.1| unnamed protein product [Homo sapiens]
Length = 432
Score = 34.5 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 18/141 (12%)
Query: 29 LFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVR 88
L D EY C + + P + + + I G + +
Sbjct: 136 LADEGEYTCSIFTM-PVRTAKSLVTVLGIPQKPII---------TGYKSSLREKDTATLN 185
Query: 89 IVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVL-----NDNTKHS 143
+S ++ A +L W +LH + R + V + + +D
Sbjct: 186 CQSSGSKP---AARLTWRKGDQELHGEPTRIQEDPNGKTFTVSSSVTFQVTREDDGASIV 242
Query: 144 CKVIDISESGVSVSVDLQIEM 164
C V S G S +IE+
Sbjct: 243 CSVNHESLKGADRSTSQRIEV 263
>gi|209967064|ref|YP_002299979.1| methyl-accepting chemotaxis protein, putative [Rhodospirillum
centenum SW]
gi|209960530|gb|ACJ01167.1| methyl-accepting chemotaxis protein, putative [Rhodospirillum
centenum SW]
Length = 669
Score = 34.5 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 53/146 (36%), Gaps = 15/146 (10%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGERSIVFVEK 68
+ D+R R V + G + G + C++ ++S G + G + V +
Sbjct: 447 RLADRRVDHRRPVLVDGMLTVE-GQQRACMIHDLSCHGAA-LDAAAPPPAGSPVTLHVPR 504
Query: 69 VGR-IEGKVVNFDSNRGYAVRIVTSENERRKL-------ADKLIWLANKDDLHLQDCRAY 120
+ R +E VV + ++ S + ++ A ++ LA +D +
Sbjct: 505 LDRTLEATVVALSGSCTLHLKFAGSGLDAAEVELVATESARQITLLAKQDHAAFVEQVEA 564
Query: 121 GRKITRDREVDAQLVLNDNTKHSCKV 146
R A L T H+C++
Sbjct: 565 A-VAGRIELDAADLS----THHTCRL 585
>gi|225175957|ref|ZP_03729949.1| type IV pilus assembly PilZ [Dethiobacter alkaliphilus AHT 1]
gi|225168545|gb|EEG77347.1| type IV pilus assembly PilZ [Dethiobacter alkaliphilus AHT 1]
Length = 224
Score = 34.5 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 56/167 (33%), Gaps = 36/167 (21%)
Query: 17 QRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMF------LVGERSIVFV---- 66
++V++ GR + + ++ + + P V ++ V
Sbjct: 18 KQVRISTAGR-----QEDSLGQIVDLGTDTVGLKIIAPTASLPEVWQVQDQVTVSFVVPE 72
Query: 67 EKVGRIEGKVVNFDSNRGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITR 126
+ + VV+F+ A+ + ++ L + + R+ R T
Sbjct: 73 DAIYSFAAHVVSFEDA---AMSLQV---------KQVTPLERR------EQRSDYRLKTA 114
Query: 127 ---DREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF 170
+ V+ ++ + ++DIS G S+ + + + V+
Sbjct: 115 KLINVAVEKEVEKSGEKWQEASLLDISRGGASILSPVSVTAGTNVMV 161
>gi|218661454|ref|ZP_03517384.1| hypothetical conserved membrane protein [Rhizobium etli IE4771]
Length = 431
Score = 34.5 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 11/80 (13%)
Query: 118 RAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQI--EMFSKVLF----- 170
R R ++ V + + ++ +++++S +G ++ + SKV
Sbjct: 308 RKADR---KNCRVFGNVKYLN-SQVDVRILNLSVTGAALETKTPLHAASGSKVRIEAENL 363
Query: 171 NDILGRVVRIFPGGIAIEFS 190
+ G + G + I+F
Sbjct: 364 GMLEGIIRWKHNGRVGIQFD 383
>gi|261251815|ref|ZP_05944389.1| hypothetical protein VIA_001836 [Vibrio orientalis CIP 102891]
gi|260938688|gb|EEX94676.1| hypothetical protein VIA_001836 [Vibrio orientalis CIP 102891]
Length = 244
Score = 34.5 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 10/80 (12%)
Query: 6 HNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLC-IVCDVPMF-LVGERSI 63
+Q R R V+L + + + C +R++S GG I + VGE
Sbjct: 125 QTMQVTQLRKEPRFDVNLAAKV-VANSHRLECEIRDLSKGGCRFITAPLSRPFQVGEEIA 183
Query: 64 VFVE-------KVGRIEGKV 76
+ V+ + G V
Sbjct: 184 LHVQLANNKGTHFEPLFGTV 203
>gi|323493261|ref|ZP_08098389.1| hypothetical protein VIBR0546_10419 [Vibrio brasiliensis LMG 20546]
gi|323312490|gb|EGA65626.1| hypothetical protein VIBR0546_10419 [Vibrio brasiliensis LMG 20546]
Length = 244
Score = 34.5 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 6 HNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLC-IVCDVPMF-LVGERSI 63
+Q R R V+L R D C +R++S GG I + VGE
Sbjct: 125 QTMQVTQLRKEPRFDVNLLARV-EADSHRLECEIRDLSKGGCRFITAPLSRPFQVGEEIA 183
Query: 64 VFVE 67
+ V+
Sbjct: 184 LHVQ 187
>gi|254477477|ref|ZP_05090863.1| Type IV pilus assembly protein PilZ [Ruegeria sp. R11]
gi|214031720|gb|EEB72555.1| Type IV pilus assembly protein PilZ [Ruegeria sp. R11]
Length = 316
Score = 34.5 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 11/95 (11%)
Query: 117 CRAYGRKITRDREVDAQL--VLNDNTKHS-CKVIDISESGVSVSVDLQIEMFSKVLF--- 170
R R + L L+D + ++DIS+ G + ++ +K+
Sbjct: 183 ERRTRMLNARRKRYTCALECTLHDGGVATEAAILDISQEGAKIEAHCNSQVGAKITLEMP 242
Query: 171 -----NDILGRVVRIFPGGIAIEFSSVQESNIAFK 200
+ GR++ + I+FS +
Sbjct: 243 DGVDPARLEGRILWVNADHFGIKFSRILSRTEVEA 277
>gi|114328370|ref|YP_745527.1| gamma-glutamyl kinase [Granulibacter bethesdensis CGDNIH1]
gi|114316544|gb|ABI62604.1| glutamate 5-kinase [Granulibacter bethesdensis CGDNIH1]
Length = 381
Score = 34.5 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 12/137 (8%)
Query: 47 LCIVCDVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGYAVRIVT--SENERRKLA--DK 102
+ + + GE + R + + G A+ I +++ R LA +
Sbjct: 206 VRAITPEIEAMGGEPPPGYSSGGMRTKLTAARIATGAGCAMAIALGHTDHPLRALAEGAR 265
Query: 103 LIWLANKDDLHLQDCRAYG-RKITRDREVDAQLVLNDNTKHSCKVIDISESGVSV-SVDL 160
W L L + R R I + L ++D + + S V SVD
Sbjct: 266 CTWF-----LPLPEGRTARKRWIAGSLQPMGTLTVDDGARR-ALLRGGSLLPAGVVSVDG 319
Query: 161 QIEMFSKVLFNDILGRV 177
+ E VL + G V
Sbjct: 320 RFERGDPVLVQGLDGTV 336
>gi|255327281|ref|ZP_05368355.1| hypothetical protein ROTMU0001_1331 [Rothia mucilaginosa ATCC
25296]
gi|255295561|gb|EET74904.1| hypothetical protein ROTMU0001_1331 [Rothia mucilaginosa ATCC
25296]
Length = 788
Score = 34.5 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 22/66 (33%), Gaps = 5/66 (7%)
Query: 95 ERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDIS---- 150
+R DKL W ++ R I ++ D ++ + ID S
Sbjct: 721 QRDGSTDKLSWSGVRESGTRYQVLRDDRVIATVSGTSYEVEHTDGARYYVRSIDASENFS 780
Query: 151 -ESGVS 155
+G +
Sbjct: 781 ASTGAA 786
>gi|148255015|ref|YP_001239600.1| glycosyltransferase [Bradyrhizobium sp. BTAi1]
gi|146407188|gb|ABQ35694.1| Putative Glycosyltransferase, possibly the catalytic subunit of a
cellulose synthase [Bradyrhizobium sp. BTAi1]
Length = 658
Score = 34.5 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 28 LLFDGTEYNCIVREISPGGLCIVC--DVPMFLVGERSIVFVEKVGRIEGKVVNFDSNRGY 85
L D C + +S + + G R + ++ +G IE V S
Sbjct: 553 LAKDNEVVPCRIEALSLSSARVAGLRHQRLTTPGSRLPLHLDGLGWIEASVSAV-SKTTM 611
Query: 86 AVRIVTSENERRKLADKL 103
+R+ SE +RR+L +L
Sbjct: 612 HLRLQPSEAQRRQLVLRL 629
>gi|283458571|ref|YP_003363204.1| hypothetical protein RMDY18_15520 [Rothia mucilaginosa DY-18]
gi|283134619|dbj|BAI65384.1| uncharacterized protein conserved in archaea [Rothia mucilaginosa
DY-18]
Length = 800
Score = 34.5 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 22/66 (33%), Gaps = 5/66 (7%)
Query: 95 ERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDIS---- 150
+R DKL W ++ R I ++ D ++ + ID S
Sbjct: 733 QRDGSTDKLSWSGVRESGARYQVLRDDRVIATVSGTSYEVEHTDGARYYVRSIDASENFS 792
Query: 151 -ESGVS 155
+G +
Sbjct: 793 ASTGAA 798
>gi|255019539|ref|ZP_05291631.1| Cellulose synthase catalytic subunit (UDP-forming)
[Acidithiobacillus caldus ATCC 51756]
gi|254971037|gb|EET28507.1| Cellulose synthase catalytic subunit (UDP-forming)
[Acidithiobacillus caldus ATCC 51756]
Length = 865
Score = 34.5 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 16/99 (16%)
Query: 115 QDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLFNDIL 174
R R R +L+L+D + DIS G V + E + + +L
Sbjct: 642 PQRRTAARVGLRKPI---KLILSDGSLIDASTEDISWRGARVLPEFWTEFERNTVVSVML 698
Query: 175 G-------RVV------RIFPGGIAIEFSSVQESNIAFK 200
R+V R G +A+EF ++
Sbjct: 699 APGKCLPVRLVDSSVTSRDHAGALAVEFVLENSEDVVLA 737
>gi|170750150|ref|YP_001756410.1| type IV pilus assembly PilZ [Methylobacterium radiotolerans JCM
2831]
gi|170656672|gb|ACB25727.1| type IV pilus assembly PilZ [Methylobacterium radiotolerans JCM
2831]
Length = 136
Score = 34.5 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 12 DQRAFQRVKVDLKGRFLLFDGTE-YNCIVREISPGGLCIVCDVPMFLVGERSIVFVEKVG 70
+ R R +V LKGR + +G+ +C+VR++SP G +V L + +++ +
Sbjct: 3 EHRRETRQRVFLKGRVVFNNGSSSLDCLVRDMSPTGARLVMSEATTLP-DAFDLYIPQKD 61
Query: 71 RIEGKVVNFDSNRGYAVRIVTSEN 94
R + + G V
Sbjct: 62 RTYRATLRWRREDGIGVTFEVPAR 85
>gi|254417445|ref|ZP_05031186.1| cellulose synthase catalytic subunit (UDP-forming) [Microcoleus
chthonoplastes PCC 7420]
gi|196175788|gb|EDX70811.1| cellulose synthase catalytic subunit (UDP-forming) [Microcoleus
chthonoplastes PCC 7420]
Length = 883
Score = 34.5 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 7/66 (10%)
Query: 115 QDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKV---LFN 171
R R ++ + + + + ID+SE+G + +D + +V L
Sbjct: 608 PQLRRAHRLQ----RKLTAIIHSGGSSWTGETIDVSETGAQILLDEWPNIPDEVKIELVG 663
Query: 172 DILGRV 177
D RV
Sbjct: 664 DYGARV 669
>gi|254252642|ref|ZP_04945960.1| Glycosyltransferase [Burkholderia dolosa AUO158]
gi|124895251|gb|EAY69131.1| Glycosyltransferase [Burkholderia dolosa AUO158]
Length = 838
Score = 34.5 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 9 QFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCI-VCDVPMFLVGE 60
+ R R+ + + +L DG+ C + S GGL + VG+
Sbjct: 682 EAKQVRVTHRIAMRVPATLVLADGSTAACFTSDYSTGGLGLEAVPGLALEVGD 734
>gi|170720073|ref|YP_001747761.1| type IV pilus assembly PilZ [Pseudomonas putida W619]
gi|169758076|gb|ACA71392.1| type IV pilus assembly PilZ [Pseudomonas putida W619]
Length = 388
Score = 34.5 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 13 QRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCDVPMFLVGE----RSIVFVEK 68
QR RV++ K R+L + + V ++S GGL P+ VG+ R V+
Sbjct: 16 QRQHARVRIPAKLRYLDGERQTHEVKVEDLSAGGLSFYAKQPL-KVGQVLRGRLQFVVDN 74
Query: 69 VG 70
+G
Sbjct: 75 LG 76
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.152 0.443
Lambda K H
0.267 0.0466 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,354,380,767
Number of Sequences: 14124377
Number of extensions: 116732573
Number of successful extensions: 481601
Number of sequences better than 10.0: 901
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 561
Number of HSP's that attempted gapping in prelim test: 480018
Number of HSP's gapped (non-prelim): 1535
length of query: 207
length of database: 4,842,793,630
effective HSP length: 133
effective length of query: 74
effective length of database: 2,964,251,489
effective search space: 219354610186
effective search space used: 219354610186
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.9 bits)
S2: 78 (34.5 bits)