RPSBLAST alignment of GI: 254780885 and protein with PDBid: 2rde

>2rde_A Uncharacterized protein VCA0042; C-DI-GMP, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.92A {Vibrio cholerae O395} SCOP: b.45.2.1 b.45.2.2 PDB: 1yln_A* Length = 251

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 21/113 (18%), Positives = 44/113 (38%), Gaps = 14/113 (12%)

Query: 6   HNLQFIDQRAFQRVKVDLKGRFLLFDGTEYNCIVREISPGGLCIVCD--VPMFLVGERSI 63
           + +Q    R   R +++L G+ +LFD    +C +R++S  G   +       + VG+   
Sbjct: 127 NTMQVSQLRKEPRFELNLAGK-VLFDEHRGDCELRDLSRSGCRFITPPLGKTYQVGDLVA 185

Query: 64  VFV-------EKVGRIEGKVVN-FDSNRGYAVRI---VTSENERRKLADKLIW 105
           + +       +    + GK+ N   S       +       N  + L  +L +
Sbjct: 186 LEIFSDLRGTKTFPPLTGKICNLQRSLHHARYGLEFNEEGRNNAKNLLAQLKF 238