RPSBLAST alignment of GI: 254780885 and protein with PDBid: 2rde

>2rde_A Uncharacterized protein VCA0042; C-DI-GMP, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.92A {Vibrio cholerae O395} SCOP: b.45.2.1 b.45.2.2 PDB: 1yln_A* Length = 251

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 29/204 (14%), Positives = 73/204 (35%), Gaps = 44/204 (21%)

Query: 32  GTEYNCIVREI-SPGGLCIVCDVPMFLVGERSIVFVEKV--------GRIEGKVVNFDSN 82
           GT++ C    I +     ++ ++P     +    F E           R EG +++F S 
Sbjct: 50  GTKFVCRTPFIGTHTDKFLLVEMPKISADDLQYFFQEGFWMNIRAISPRGEGALIHFRSQ 109

Query: 83  RGYAVRIVTSENERRKLADKLIWLANKDDLHLQDCRAYGRKITRDREVDAQLVLNDNTKH 142
               +  +  E         + +L+  + + +   R   R       +  +++ +++   
Sbjct: 110 ----LMHILQEPVP------MAFLSIPNTMQVSQLRKEPRFELN---LAGKVLFDEHR-G 155

Query: 143 SCKVIDISESGVS---------------VSVDLQIEMFSKVLFNDILGRVVRIFPGG--- 184
            C++ D+S SG                 V++++  ++     F  + G++  +       
Sbjct: 156 DCELRDLSRSGCRFITPPLGKTYQVGDLVALEIFSDLRGTKTFPPLTGKICNLQRSLHHA 215

Query: 185 -IAIEFSSVQESNIAFKSLINHCY 207
              +EF+    +N   K+L+    
Sbjct: 216 RYGLEFNEEGRNNA--KNLLAQLK 237