HHsearch alignment for GI: 254780889 and conserved domain: COG0167
>COG0167 PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism].
Probab=98.06 E-value=0.00044 Score=48.71 Aligned_cols=170 Identities=26% Similarity=0.331 Sum_probs=105.2
Q ss_pred CHHHHHHHHHHHCC-CCEEEEECCCCH----------HHHHHHHHHHHHHHCCCCCEE---CCCCCC-HHHHHHHHHCCC
Q ss_conf 01567899987313-666998248411----------388999999999857987245---146469-999999985487
Q gi|254780889|r 232 KDIADRVGPLFDVN-VDLVVVDTAHGH----------SQKVLDAVVQIKKNFPSLLVM---AGNIAT-AEGALALIDAGA 296 (493)
Q Consensus 232 ~d~~eRa~~LveaG-vDviviD~ahGh----------~~~~~~~i~~~k~~~~~~~ii---~GNv~t-~~~~~~l~~~Ga 296 (493)
T Consensus 109 ~~~~d~~~~~~~~~~ad~ielNiScPnt~g~~~l~~~~e~l~~l~~~vk~~~~-~Pv~vKl~P~~~di~~iA~~~~~~g~ 187 (310)
T COG0167 109 EAWADYARLLEEAGDADAIELNISCPNTPGGRALGQDPELLEKLLEAVKAATK-VPVFVKLAPNITDIDEIAKAAEEAGA 187 (310)
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHCCC-CCEEEEECCCHHHHHHHHHHHHHCCC
T ss_conf 88999999997507788799985389997746654399999999999986356-86599938888999999999997498
Q ss_pred CEEEEE--ECCCC-CCCCC-------HHCCCCCCCCH--HHHHHHHHHHCCC--CEEEEECCCCCHHHHEEEEEECCCEE
Q ss_conf 589961--02787-66531-------00015743100--3788999862269--81997265437776213367148789
Q gi|254780889|r 297 DIIKVG--IGPGS-ICTTR-------VVTGVGCPQLS--AIMSVVEVAERAG--VAIVADGGIRFSGDIAKAIAAGSACV 362 (493)
Q Consensus 297 d~ikvG--ig~Gs-~CtTr-------~~~g~g~pq~~--av~~~~~~~~~~~--~~iiadGGi~~~gdi~kAla~GA~~V 362 (493)
T Consensus 188 Dgl~~~NT~~~~~~i~~~~~~~~~~~~~GGLSG~~ikp~al~~v~~l~~~~~~~ipIIGvGGI~s~~DA~E~i~aGA~~v 267 (310)
T COG0167 188 DGLIAINTTKSGMKIDLETKKPVLANETGGLSGPPLKPIALRVVAELYKRLGGDIPIIGVGGIETGEDALEFILAGASAV 267 (310)
T ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCHH
T ss_conf 58999700366553012345556676777757510027899999999984289974898468696999999998297564
Q ss_pred EECCHHHCCCCCCCCEEEECCEEEEEEECCCCHHHHHHCCHHHHCCCCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHH
Q ss_conf 93230101216776448736805888733200688752212221012333433100454026621057589989999999
Q gi|254780889|r 363 MIGSLLAGTDESPGDIFLYQGRSFKSYRGMGSVAAMERGSSARYSQDGVTDVLKLVPEGIEGRVPYKGPIASVLHQMSGG 442 (493)
Q Consensus 363 M~G~~~agt~Espg~~~~~~g~~~K~yrGm~S~~A~~~~~~~ry~~~~~~~~~k~v~eGv~~~v~~~G~~~~~~~~~~~g 442 (493)
T Consensus 268 Qv~Tal-------------------~~~Gp-----------------------------------------~i~~~I~~~ 287 (310)
T COG0167 268 QVGTAL-------------------IYKGP-----------------------------------------GIVKEIIKG 287 (310)
T ss_pred EEEEEE-------------------EEECC-----------------------------------------HHHHHHHHH
T ss_conf 041121-------------------02085-----------------------------------------099999999
Q ss_pred HHHHHHHCCCCCHHHHHHCC
Q ss_conf 99855515758776897375
Q gi|254780889|r 443 LKSSMGYVGASNIEEFQKKA 462 (493)
Q Consensus 443 lrs~~~y~G~~~i~e~~~~~ 462 (493)
T Consensus 288 l~~~l~~~g~~si~d~~G~~ 307 (310)
T COG0167 288 LARWLEEKGFESIQDIIGSA 307 (310)
T ss_pred HHHHHHHCCCCCHHHHHCHH
T ss_conf 99999981998799984533