HHsearch alignment for GI: 254780889 and conserved domain: COG2905
>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms].
Probab=99.69 E-value=1.7e-16 Score=137.77 Aligned_cols=157 Identities=29% Similarity=0.377 Sum_probs=117.6
Q ss_pred HHHHHHCCCEECCCEEEECCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEHHHHC-----CCCCCCCCCCCCCCCCC
Q ss_conf 9874223881528789946543034565667605041678668860278872354500-----14344672440026786
Q gi|254780889|r 89 HQVKKFESGMVVNPVTISPYATLADALALMKKYSISGIPVVESDVGKLVGILTNRDVR-----FASNAQQAVGELMTRNL 163 (493)
Q Consensus 89 ~kVKr~e~gmI~dPVti~pd~TI~ea~~lm~~~~is~iPVVD~~~gkLiGIVT~rDir-----~~~~~~~~V~eiMt~~l 163 (493)
T Consensus 149 trv~~---~~~~~~~~v~~~~~i~~aa~km~~~gv~s~v~l~~~-~~~~GIvT~~dl~~~v~~~g~~~~~~V~evmT~p~ 224 (610)
T COG2905 149 TRVGE---VKTLPAVTVSPQASIQDAARKMKDEGVSSLVVLDDS-GPLLGIVTRKDLRSRVIADGRSKTQKVSEVMTSPV 224 (610)
T ss_pred HHHHH---HHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCC-CCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHCCCC
T ss_conf 98777---741787526865767999999996088728998379-87433242277789998658974233545414684
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCHHCCC-CCC-CCCCCCCCEEEEEEEECCCHHHHHHHHH
Q ss_conf 32573035899999998655330645747997868898021000101-742-2326568765556651370156789998
Q gi|254780889|r 164 ITVKKTVNLENAKALLHQHRIEKLLVVDDDGCCIGLITVKDIERSQL-NPN-ATKDSKGRLRVAAAVSVAKDIADRVGPL 241 (493)
Q Consensus 164 itv~~~~~l~eA~~iM~~~ki~~LPVVDe~g~LvGIIT~~DIlk~~~-~p~-A~~D~~grL~VgAAIg~~~d~~eRa~~L 241 (493)
T Consensus 225 ~svd~~~~~feAml~m~r~~I~hl~V~-e~gq~~Gilt~~dIl~l~s~~~~vl~~~i~~a~sI~el~~~~e~~~~~~s~L 303 (610)
T COG2905 225 ISVDRGDFLFEAMLMMLRNRIKHLPVT-EDGQPLGILTLTDILRLFSQNSIVLVKRIARASSIEELANTAELLDDSLSTL 303 (610)
T ss_pred EEECCCCHHHHHHHHHHHHCCCEEEEE-CCCEEEEEEEHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 454476569999999998077442361-1890467766999997617785453177554401999999999999999999
Q ss_pred HHCCCCEEE
Q ss_conf 731366699
Q gi|254780889|r 242 FDVNVDLVV 250 (493)
Q Consensus 242 veaGvDviv 250 (493)
T Consensus 304 ~~~gv~~~~ 312 (610)
T COG2905 304 VSRGVRTEF 312 (610)
T ss_pred HHCCCCHHH
T ss_conf 857997899