HHsearch alignment for GI: 254780889 and conserved domain: COG3620
>COG3620 Predicted transcriptional regulator with C-terminal CBS domains [Transcription].
Probab=99.34 E-value=2.9e-12 Score=107.34 Aligned_cols=111 Identities=32% Similarity=0.469 Sum_probs=95.0
Q ss_pred HCCCEECCCEEEECCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEHHHHC--C----CCCCCCCCCCCCCCCCCCCC
Q ss_conf 23881528789946543034565667605041678668860278872354500--1----43446724400267863257
Q gi|254780889|r 94 FESGMVVNPVTISPYATLADALALMKKYSISGIPVVESDVGKLVGILTNRDVR--F----ASNAQQAVGELMTRNLITVK 167 (493)
Q Consensus 94 ~e~gmI~dPVti~pd~TI~ea~~lm~~~~is~iPVVD~~~gkLiGIVT~rDir--~----~~~~~~~V~eiMt~~litv~ 167 (493)
T Consensus 67 a~~iM~spvv~v~pdDsi~~vv~lM~~~g~SQlPVi~~--~k~VGsItE~~iv~~~le~~e~i~~~~vr~vM~e~fP~Vs 144 (187)
T COG3620 67 AKTIMHSPVVSVSPDDSISDVVNLMRDKGISQLPVIEE--DKVVGSITENDIVRALLEGMESIRSLRVREVMGEPFPTVS 144 (187)
T ss_pred HHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCCEEEC--CEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
T ss_conf 76653587058772466999999999759752754108--8645331498999997304221211218988558887679
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCHHCC
Q ss_conf 303589999999865533064574799786889802100010
Q gi|254780889|r 168 KTVNLENAKALLHQHRIEKLLVVDDDGCCIGLITVKDIERSQ 209 (493)
Q Consensus 168 ~~~~l~eA~~iM~~~ki~~LPVVDe~g~LvGIIT~~DIlk~~ 209 (493)
T Consensus 145 ~~~~l~vI~~LL~~~~--AVlV~-e~G~~vGIITk~DI~k~~ 183 (187)
T COG3620 145 PDESLNVISQLLEEHP--AVLVV-ENGKVVGIITKADIMKLL 183 (187)
T ss_pred CCCCHHHHHHHHHHCC--EEEEE-ECCCEEEEEEHHHHHHHH
T ss_conf 9998799999984198--38998-689368887599999987