HHsearch alignment for GI: 254780889 and conserved domain: PRK06552

Probab=98.23  E-value=3.8e-05  Score=56.31  Aligned_cols=108  Identities=19%  Similarity=0.287  Sum_probs=70.2

Q ss_pred             CHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHC---CCCCEECCCCCCHHHHHHHHHCCCCEEEEEECCCCC
Q ss_conf             01567899987313666998248411388999999999857---987245146469999999985487589961027876
Q gi|254780889|r  232 KDIADRVGPLFDVNVDLVVVDTAHGHSQKVLDAVVQIKKNF---PSLLVMAGNIATAEGALALIDAGADIIKVGIGPGSI  308 (493)
Q Consensus       232 ~d~~eRa~~LveaGvDviviD~ahGh~~~~~~~i~~~k~~~---~~~~ii~GNv~t~~~~~~l~~~Gad~ikvGig~Gs~  308 (493)
T Consensus        25 ~~a~~~~~al~~gGi~~iEITl---~tp~a~~~i~~l~~~~~~~p~~~iGaGTV~~~e~~~~a~~aGA~Fi---VSP~--   96 (209)
T PRK06552         25 EEALKISLAVIKGGIKAIEVTY---TNPFASEVIKELVERYKDDPEVLIGAGTVLDAVTARQAILAGAQFI---VSPS--   96 (209)
T ss_pred             HHHHHHHHHHHHCCCCEEEEEC---CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEE---ECCC--
T ss_conf             9999999999987998899967---8975999999999981779981898872748999999998599889---7699--


Q ss_pred             CCCCHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHEEEEEECCCEEEE
Q ss_conf             65310001574310037889998622698199726543777621336714878993
Q gi|254780889|r  309 CTTRVVTGVGCPQLSAIMSVVEVAERAGVAIVADGGIRFSGDIAKAIAAGSACVMI  364 (493)
Q Consensus       309 CtTr~~~g~g~pq~~av~~~~~~~~~~~~~iiadGGi~~~gdi~kAla~GA~~VM~  364 (493)
T Consensus        97 -~~--------------~~v~~~a~~~~i~~iP--G~~TpsEi~~A~~~Ga~~vKl  135 (209)
T PRK06552         97 -FN--------------RETAKICNRYQIPYLP--GCMTVTEIVTALEAGVDIVKL  135 (209)
T ss_pred             -CC--------------HHHHHHHHHCCCCEEC--CCCCHHHHHHHHHCCCCEEEE
T ss_conf             -98--------------9999999985996417--979999999999869995885