HHsearch alignment for GI: 254780889 and conserved domain: PRK10070
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional.
Probab=99.22 E-value=5.7e-11 Score=98.14 Aligned_cols=124 Identities=19% Similarity=0.174 Sum_probs=100.6
Q ss_pred HHHHHHHH-----HHCCCEECCCEEE---ECCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEHHHHCCCCCCCCCCC
Q ss_conf 99999874-----2238815287899---465430345656676050416786688602788723545001434467244
Q gi|254780889|r 85 VAQVHQVK-----KFESGMVVNPVTI---SPYATLADALALMKKYSISGIPVVESDVGKLVGILTNRDVRFASNAQQAVG 156 (493)
Q Consensus 85 a~~V~kVK-----r~e~gmI~dPVti---~pd~TI~ea~~lm~~~~is~iPVVD~~~gkLiGIVT~rDir~~~~~~~~V~ 156 (493)
T Consensus 262 ~~F~~~v~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~al~~m~~~~~~~~~vvd~~-~~~~G~v~~~~~~~~~~~~~~~~ 340 (400)
T PRK10070 262 RTFFRGVDISQVFSAKDIARRTPNGLIRKTPGFGPRSALKLLQDEDREYGYVIERG-NKFVGAVSIDSLKAALTQQQGLD 340 (400)
T ss_pred HHHHCCCCHHHCEEHHHHHCCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCC-CEEEEEEEHHHHHHHHHCCCCHH
T ss_conf 98755477877023989624687521314888699999999985598679998699-80889988999997763377636
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCHHCCC
Q ss_conf 002678632573035899999998655330645747997868898021000101
Q gi|254780889|r 157 ELMTRNLITVKKTVNLENAKALLHQHRIEKLLVVDDDGCCIGLITVKDIERSQL 210 (493)
Q Consensus 157 eiMt~~litv~~~~~l~eA~~iM~~~ki~~LPVVDe~g~LvGIIT~~DIlk~~~ 210 (493)
T Consensus 341 ~~~~~~~~~v~~~~~l~~~~~~~~~~~~~-~~Vvd~~~~l~G~it~~~ll~~L~ 393 (400)
T PRK10070 341 AALIDAPLAVDAQTPLSELLSHVGQAPCA-VPVVDEDQQYVGIISKGMLLRALD 393 (400)
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHCCCC-EEEECCCCCEEEEEEHHHHHHHHH
T ss_conf 67505884239999899999999728996-389879991999998799999987