HHsearch alignment for GI: 254780889 and conserved domain: TIGR01137
>TIGR01137 cysta_beta cystathionine beta-synthase; InterPro: IPR005857 This model discriminates cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain from cysteine synthases. Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid - the function of many of these enzymes is unproven.; GO: 0004122 cystathionine beta-synthase activity, 0019343 cysteine biosynthetic process via cystathionine, 0005737 cytoplasm.
Probab=96.24 E-value=0.0054 Score=40.91 Aligned_cols=143 Identities=22% Similarity=0.283 Sum_probs=87.4
Q ss_pred HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHC---CCEECCC-EEEECCCCHHHHH-H-----HHHHHCCCCEEEE
Q ss_conf 889999997798799978989899999999874223---8815287-8994654303456-5-----6676050416786
Q gi|254780889|r 60 SRLAIAMAQAGGLGVIHRNFSPSEQVAQVHQVKKFE---SGMVVNP-VTISPYATLADAL-A-----LMKKYSISGIPVV 129 (493)
Q Consensus 60 ~~MAiamA~~GGiGvIHrn~sie~qa~~V~kVKr~e---~gmI~dP-Vti~pd~TI~ea~-~-----lm~~~~is~iPVV 129 (493)
T Consensus 265 F~maRrLi~eEGlLvG-----GS~GsAvvaal~~A~~hP~l~~~~~~VvlLPD-S~R~YmtK~~nD~Wl~~~Gf-----l 333 (527)
T TIGR01137 265 FKMARRLIKEEGLLVG-----GSSGSAVVAALKVAEDHPELKEDQVIVVLLPD-SIRNYMTKFLNDEWLLDNGF-----L 333 (527)
T ss_pred HHHHHHHHHHCCEEEE-----CCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC-CCCHHHHHEECHHHHHHCCC-----C
T ss_conf 9999999874472640-----43035899999998726788888789998468-73000100104378864587-----5
Q ss_pred CCCCEEEEE---EEEHHHHC--------CCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC------
Q ss_conf 688602788---72354500--------143-446724400267863257303589999999865533064574------
Q gi|254780889|r 130 ESDVGKLVG---ILTNRDVR--------FAS-NAQQAVGELMTRNLITVKKTVNLENAKALLHQHRIEKLLVVD------ 191 (493)
Q Consensus 130 D~~~gkLiG---IVT~rDir--------~~~-~~~~~V~eiMt~~litv~~~~~l~eA~~iM~~~ki~~LPVVD------ 191 (493)
T Consensus 334 ~~---rldg~~e~~~~~~~~~leasttky~~~~~~~~v~~l~L~~~v~~~~t~tv~~ai~iLre~GfdQ~PVv~pga~~P 410 (527)
T TIGR01137 334 DD---RLDGSTESLTVKDVLKLEASTTKYEDVFGNARVKDLHLPALVTVHPTETVGDAIEILREYGFDQLPVVKPGAAEP 410 (527)
T ss_pred CC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 10---115776134544455543332225564256364156688734546764089999999974873076207788889
Q ss_pred --CCCCEEEEEEECCCHHCCCCCCCCC
Q ss_conf --7997868898021000101742232
Q gi|254780889|r 192 --DDGCCIGLITVKDIERSQLNPNATK 216 (493)
Q Consensus 192 --e~g~LvGIIT~~DIlk~~~~p~A~~ 216 (493)
T Consensus 411 ~veag~v~G~v~l~~lL~~l~~~~a~~ 437 (527)
T TIGR01137 411 DVEAGKVLGSVTLRELLSALFAKKAKL 437 (527)
T ss_pred CCCCCEEEEEEEHHHHHHHHHHCCCCC
T ss_conf 723534788742677899998424675