HHsearch alignment for GI: 254780889 and conserved domain: cd02205
>cd02205 CBS_pair The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generali
Probab=99.50 E-value=1.2e-13 Score=117.36 Aligned_cols=108 Identities=46% Similarity=0.714 Sum_probs=96.4
Q ss_pred CCCEEEECCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEHHHHCCC-----CCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 2878994654303456566760504167866886027887235450014-----34467244002678632573035899
Q gi|254780889|r 100 VNPVTISPYATLADALALMKKYSISGIPVVESDVGKLVGILTNRDVRFA-----SNAQQAVGELMTRNLITVKKTVNLEN 174 (493)
Q Consensus 100 ~dPVti~pd~TI~ea~~lm~~~~is~iPVVD~~~gkLiGIVT~rDir~~-----~~~~~~V~eiMt~~litv~~~~~l~e 174 (493)
T Consensus 1 ~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~-~~~~G~it~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 79 (113)
T cd02205 1 RDVVTVSPDDTVAEALRLMLEHGISGLPVVDDD-GRLVGIVTERDLLRALAEGGLDPLVTVGDVMTRDVVTVSPDTSLEE 79 (113)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCEEEEEECCC-CCEEEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCHHHH
T ss_conf 997796892989999999998398099999399-9599999889989887631574103304567505468973211779
Q ss_pred HHHHHHHCCCCEEEEECCCCCEEEEEEECCCHHC
Q ss_conf 9999986553306457479978688980210001
Q gi|254780889|r 175 AKALLHQHRIEKLLVVDDDGCCIGLITVKDIERS 208 (493)
Q Consensus 175 A~~iM~~~ki~~LPVVDe~g~LvGIIT~~DIlk~ 208 (493)
T Consensus 80 ~~~~~~~~~~~~~~Vvd~~~~~iG~vs~~di~~~ 113 (113)
T cd02205 80 AAELMLEHGIRRLPVVDDEGRLVGIVTRSDILRA 113 (113)
T ss_pred HHHHHHHCCCEEEEEEECCCEEEEEEEHHHHHCC
T ss_conf 9999998497299999669979999988997469