HHsearch alignment for GI: 254780889 and conserved domain: cd04631
>cd04631 CBS_pair_18 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=98.39 E-value=1.5e-06 Score=66.38 Aligned_cols=49 Identities=29% Similarity=0.487 Sum_probs=41.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCC-CCEEEEEEECCCHHCC
Q ss_conf 786325730358999999986553306457479-9786889802100010
Q gi|254780889|r 161 RNLITVKKTVNLENAKALLHQHRIEKLLVVDDD-GCCIGLITVKDIERSQ 209 (493)
Q Consensus 161 ~~litv~~~~~l~eA~~iM~~~ki~~LPVVDe~-g~LvGIIT~~DIlk~~ 209 (493)
T Consensus 1 r~vvtv~~~~tl~ea~~~m~~~~v~~~PVvd~~~~~lvGiit~~Di~~~~ 50 (125)
T cd04631 1 KDVVTVPPTTPIMEAAKIMVRNGFRRLPVVDEGTGKLVGIITATDILKYL 50 (125)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHHHHHH
T ss_conf 99779799094999999999839988999979999599999999999987