HHsearch alignment for GI: 254780889 and conserved domain: pfam01180
>pfam01180 DHO_dh Dihydroorotate dehydrogenase.
Probab=98.62 E-value=5.5e-06 Score=62.34 Aligned_cols=135 Identities=21% Similarity=0.231 Sum_probs=81.6
Q ss_pred CHHHHHHHHHHHCCCCEEEEECC--C---C----HHHHHH-HHHHHHHHHCCCCCEEC---CCCCCHHHHH-HHHHCCCC
Q ss_conf 01567899987313666998248--4---1----138899-99999998579872451---4646999999-99854875
Q gi|254780889|r 232 KDIADRVGPLFDVNVDLVVVDTA--H---G----HSQKVL-DAVVQIKKNFPSLLVMA---GNIATAEGAL-ALIDAGAD 297 (493)
Q Consensus 232 ~d~~eRa~~LveaGvDviviD~a--h---G----h~~~~~-~~i~~~k~~~~~~~ii~---GNv~t~~~~~-~l~~~Gad 297 (493)
T Consensus 106 ~d~~~~~~~~-~~~ad~iElNiScPn~~~~~~~~~~~~~~~~i~~~v~~~-~~~Pv~vKlsp~~~~~~~~~~a~~~~~a~ 183 (290)
T pfam01180 106 EDYVEVARKI-GPFADYLELNVSCPNTPGLRALQTDPELAAILLKVVKEV-SKVPVLVKLAPDLTDIVIIDIADVAAGED 183 (290)
T ss_pred HHHHHHHHHH-HHHCCEEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHC-CCCCEEEEECCCCCCHHHHHHHHHHCCCC
T ss_conf 9999999999-743588999985368876133404298999999998750-47873898389877468999999971837
Q ss_pred EEEEE-------ECCC-CCCCCCHHCCCCCCCCH-------HHHHHHHHHHCC--CCEEEEECCCCCHHHHEEEEEECCC
Q ss_conf 89961-------0278-76653100015743100-------378899986226--9819972654377762133671487
Q gi|254780889|r 298 IIKVG-------IGPG-SICTTRVVTGVGCPQLS-------AIMSVVEVAERA--GVAIVADGGIRFSGDIAKAIAAGSA 360 (493)
Q Consensus 298 ~ikvG-------ig~G-s~CtTr~~~g~g~pq~~-------av~~~~~~~~~~--~~~iiadGGi~~~gdi~kAla~GA~ 360 (493)
T Consensus 184 gv~gi~~~nt~~~~~~~d~~~~~~~~~~~~GGlSG~~i~~~al~~v~~~~~~~~~~ipIig~GGI~~~~da~e~i~aGA~ 263 (290)
T pfam01180 184 GLTGINATNTTVRGMRIDLKTESPILANGTGGLSGPAIKPIALKVIRELYQRVGPEIPIIGVGGIFTGEDALEKILAGAS 263 (290)
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCC
T ss_conf 76899965873465555555666312567888576067899999999999970899749998894999999999983997
Q ss_pred EEEECCHH
Q ss_conf 89932301
Q gi|254780889|r 361 CVMIGSLL 368 (493)
Q Consensus 361 ~VM~G~~~ 368 (493)
T Consensus 264 ~VQv~Tal 271 (290)
T pfam01180 264 AVQIGTAL 271 (290)
T ss_pred HHHHHHHH
T ss_conf 99985899