RPSBLAST alignment for GI: 254780889 and conserved domain: cd04595
>gnl|CDD|73095 cd04595, CBS_pair_DHH_polyA_Pol_assoc, This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with an upstream DHH domain which performs a phosphoesterase function and a downstream polyA polymerase domain. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.. Length = 110
Score = 65.2 bits (159), Expect = 3e-11
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 102 PV-TISPYATLADALALMKKYSISGIPVVESDVGKLVGILTNRDVRFASN---AQQAVGE 157
PV T+ P AT+ +A L+ +Y + +PVVE G++VGI++ RDV A V +
Sbjct: 3 PVKTVRPEATIEEARELLLRYGHTALPVVEG--GRVVGIISRRDVEKALRHGLGHAPVKD 60
Query: 158 LMTRNLITVKKTVNLENAKALLHQHRIEKLLVVDDDGCCIGLITVKDIERS 208
M+ +++TV L + L+ +H I + V +DG +G++T D+ R+
Sbjct: 61 YMSTDVVTVPPDTPLSEVQELMVEHDI-GRVPVVEDGRLVGIVTRTDLLRT 110