RPSBLAST alignment for GI: 254780889 and conserved domain: cd04602
>gnl|CDD|73102 cd04602, CBS_pair_IMPDH_2, This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the inosine 5' monophosphate dehydrogenase (IMPDH) protein. IMPDH is an essential enzyme that catalyzes the first step unique to GTP synthesis, playing a key role in the regulation of cell proliferation and differentiation. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain in IMPDH have been associated with retinitis pigmentosa.. Length = 114
Score = 94.5 bits (235), Expect = 6e-20
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 99 VVNPVTISPYATLADALALMKKYSISGIPVVE--SDVGKLVGILTNRDVRFASNAQQAVG 156
+ +P +SP T+AD L + +K SGIPV E GKL+GI+T+RD+ F ++++ +
Sbjct: 1 ITDPSVLSPDHTVADVLEIKEKKGFSGIPVTEDGKSGGKLLGIVTSRDIDFLTDSETPLS 60
Query: 157 ELMTRN--LITVKKTVNLENAKALLHQHRIEKLLVVDDDGCCIGLITVKDIER 207
E+MT L+ + LE A +L + + KL +V+DDG + L+T D+++
Sbjct: 61 EVMTPREVLVVAPTGITLEEANEILRESKKGKLPIVNDDGELVALVTRSDLKK 113