RPSBLAST alignment for GI: 254780889 and conserved domain: cd04634
>gnl|CDD|73132 cd04634, CBS_pair_21, The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).. Length = 143
Score = 61.8 bits (150), Expect = 4e-10
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 40/142 (28%)
Query: 101 NPVTISPYATLADALALMKKYSISGIPVVESDVGKLVGILTNRDV--------------- 145
NP+T + T++DA L+++ ISG PV++ GKLVGI++ D+
Sbjct: 2 NPITCNADDTISDAARLLRENKISGAPVLDG--GKLVGIVSESDILKLLVTHDPSGNLWL 59
Query: 146 ---------------------RFASNA-QQAVGELMTRNLITVKKTVNLENAKALLHQHR 183
R ++A + V ++MT+ +IT+ ++E+A L+ +H+
Sbjct: 60 PSPLELIELPLREFINWEETKRALTDAGKMKVRDIMTKKVITISPDASIEDAAELMVRHK 119
Query: 184 IEKLLVVDDDGCCIGLITVKDI 205
I++L VV+D +G++T DI
Sbjct: 120 IKRLPVVEDGR-LVGIVTRGDI 140