HHsearch alignment for GI: 254780891 and conserved domain: COG3851

>COG3851 UhpB Signal transduction histidine kinase, glucose-6-phosphate specific [Signal transduction mechanisms].
Probab=98.91  E-value=2.1e-07  Score=66.96  Aligned_cols=180  Identities=12%  Similarity=0.090  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH-
Q ss_conf             99774545422799999999999614---43014789888999999998631100112232000000000134444432-
Q gi|254780891|r   18 LCSRICHDIISPIGAIHNSLELLDEV---GIEDEVMQLIRLSSMSAIIRLKFMRLAFGYTGSVDSLIGLGDIEQVIEDF-   93 (215)
Q Consensus        18 las~IaHdlrtPL~~I~~~~elL~~~---~~~~~~~~~i~~~~~~~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-   93 (215)
T Consensus       306 vARELHDeIGQnITAIr~Qa~ivkR~~~~~q~kqaas~Ie~LslrI~~svrqLL~-rLRP~~LDdL~l~qai~~l~~Em~  384 (497)
T COG3851         306 VARELHDEIGQNITAIRTQAGIVKRAADNAQVKQAASLIEQLSLRIYDSVRQLLG-RLRPRQLDDLTLEQAIRSLLREME  384 (497)
T ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             9999899864607899999999986579777887889999999899999999987-159732222578999999999852


Q ss_pred             -HHCCCCCCCCCCCCCCCCCH----HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH
Q ss_conf             -20122332110000001000----1234445676646876532001111123557720479998789844024588740
Q gi|254780891|r   94 -IAVDKRVQVSWTGEKIDLSR----ERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIV  168 (215)
Q Consensus        94 -~~~~~~~~~~~~~~~~~~~~----~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~  168 (215)
T Consensus       385 ~~ergihcq~~~~~n~~~ldet~rvTLyRl~QE~LNNI~KHA~-AS~V~i~l~~~~e~l~Lei~DdG~Gl~-~~------  456 (497)
T COG3851         385 LEERGIHCQLDWRINETALDETQRVTLYRLCQELLNNICKHAD-ASAVTIQLWQQDERLMLEIEDDGSGLP-PG------  456 (497)
T ss_pred             HHHCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCC-CCEEEEEEEECCCEEEEEEECCCCCCC-CC------
T ss_conf             5445627987056676678854377289999999999975002-262799995178189999825886789-99------


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf             54545789987204999999999709879999877992699999419
Q gi|254780891|r  169 DGNVESTIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLEK  215 (215)
Q Consensus       169 ~~~~~~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~  215 (215)
T Consensus       457 -------~~v~G~Gl~GmrERVsaLGG~l~lss--q~GTrviVnLPq  494 (497)
T COG3851         457 -------SGVQGFGLTGMRERVSALGGTLTLSS--QHGTRVIVNLPQ  494 (497)
T ss_pred             -------CCCCCCCCCHHHHHHHHHCCCEEEEE--CCCCEEEEECCH
T ss_conf             -------98567572008999997478258874--368589994603