HHsearch alignment for GI: 254780891 and conserved domain: PRK09959
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional.
Probab=100.00 E-value=5.3e-35 Score=242.21 Aligned_cols=197 Identities=16% Similarity=0.114 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHH----HHHHHHHHHCCCCCCCCCCCCCCCCHHHH
Q ss_conf 99977454542279999999999961443014----78988899999----99986311001122320000000001344
Q gi|254780891|r 17 LLCSRICHDIISPIGAIHNSLELLDEVGIEDE----VMQLIRLSSMS----AIIRLKFMRLAFGYTGSVDSLIGLGDIEQ 88 (215)
Q Consensus 17 llas~IaHdlrtPL~~I~~~~elL~~~~~~~~----~~~~i~~~~~~----~~~l~~~~r~~~~~~~~~~~~~~~~~~~~ 88 (215)
T Consensus 714 ~FLA~MSHEIRTPLn~IiG~~eLL~~~~l~~~q~~~~l~~~~~Sa~~LL~LInDILD~SKIEaG~l~l~~~~~~l~~li~ 793 (1197)
T PRK09959 714 QFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQ 793 (1197)
T ss_pred HHHHHCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHH
T ss_conf 88874735316568999999999846899989999999999999999999888889998985388621452017999999
Q ss_pred HHHHHH-----HCCCCCCCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCC---CCCCEEEEEEECC
Q ss_conf 444322-----01223321100000----01000123444567664687653200-11111235---5772047999878
Q gi|254780891|r 89 VIEDFI-----AVDKRVQVSWTGEK----IDLSRERAKILLNLFMVAHASLPRGG-KVTISVQD---SKNENIFSLKING 155 (215)
Q Consensus 89 ~~~~~~-----~~~~~~~~~~~~~~----~~~~~~~~qvl~NLi~NA~~a~~~gg-~I~i~~~~---~~~~~~i~V~D~G 155 (215)
T Consensus 794 ~v~~~~~~~A~~K~l~l~~~~~~p~~~~v~~D~~Rl~QIL~NLlsNAIKFT~~G~V~i~~~~~~~~~~~~~l~~~V~DTG 873 (1197)
T PRK09959 794 NTCHSFGAIAASKSIALSCSSTFPEHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLGHIDDNHAVIKMTIMDSG 873 (1197)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCEEEEEEEEEECC
T ss_conf 99999999999679689995589875135267889999999998753746879789999998651798069999999778
Q ss_pred CCCCCHHHHHHHHCCCCC----CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEE
Q ss_conf 984402458874054545----78998720499999999970987999987799269999941
Q gi|254780891|r 156 NLARFPEKFTQIVDGNVE----STIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLE 214 (215)
Q Consensus 156 ~Gi~~~e~~~~~~~~~~~----~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~ 214 (215)
T Consensus 874 iGI~-~~~~~~iF~pF~Q~s~~r~~~GTGLGLaI~k~LvelMgG~I~v~S~~G~GS~F~~~lp 935 (1197)
T PRK09959 874 SGLS-QEEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNMQGDLSLESHPGIGTTFTITIP 935 (1197)
T ss_pred CCCC-HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEE
T ss_conf 7889-8899753678624778878898483599999999987992899935999449999997