HHsearch alignment for GI: 254780891 and conserved domain: PRK10547
>PRK10547 chemotaxis protein CheA; Provisional.
Probab=99.73 E-value=7e-17 Score=127.11 Aligned_cols=129 Identities=12% Similarity=0.121 Sum_probs=101.3
Q ss_pred HHHHHHHHHH-CCCCCCCCCCCCCCCCCHHHH----HHHHHHHHHHHHHH------------HHHCCCCCCCCCCCCCEE
Q ss_conf 3444443220-122332110000001000123----44456766468765------------320011111235577204
Q gi|254780891|r 86 IEQVIEDFIA-VDKRVQVSWTGEKIDLSRERA----KILLNLFMVAHASL------------PRGGKVTISVQDSKNENI 148 (215)
Q Consensus 86 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----qvl~NLi~NA~~a~------------~~gg~I~i~~~~~~~~~~ 148 (215)
T Consensus 344 ~~R~VRdlar~~gK~V~L~i~G~dtelDr~Ile~L~dPL~HLlRNAvDHGIE~peeR~a~GKp~~G~I~l~a~~~g~~v~ 423 (662)
T PRK10547 344 FPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 423 (662)
T ss_pred HHHHHHHHHHHHCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEEEEECCCEEE
T ss_conf 78999999998698259999668677719999988879999987424304899889987599972799999998599999
Q ss_pred EEEEECCCCCCCH--------------------HHHHHHHCCCCCCC-----CCCCCHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 7999878984402--------------------45887405454578-----9987204999999999709879999877
Q gi|254780891|r 149 FSLKINGNLARFP--------------------EKFTQIVDGNVEST-----IDSHDIQFYYVILLAHENKIRLLPEIID 203 (215)
Q Consensus 149 i~V~D~G~Gi~~~--------------------e~~~~~~~~~~~~~-----~~g~GlGl~~~~~i~~~~gG~i~v~~~~ 203 (215)
T Consensus 424 I~v~DDGrGiD~e~Ir~kAv~kGL~~~e~lsd~e~~~LIF~PGFSTa~~Vt~lSGRGVGmDVV~~~v~~l~G~v~v~S~~ 503 (662)
T PRK10547 424 IEVTDDGAGLNRERILAKAASQGLAVSENMSDDEVGMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQEMGGHVEIQSKQ 503 (662)
T ss_pred EEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEC
T ss_conf 99981899989999999999849998533899999999717998623223568886646899999999829989999608
Q ss_pred CCCEEEEEEEE
Q ss_conf 99269999941
Q gi|254780891|r 204 DHNVVLSALLE 214 (215)
Q Consensus 204 ~~g~~f~~~l~ 214 (215)
T Consensus 504 G~GT~F~l~lP 514 (662)
T PRK10547 504 GTGTTIRILLP 514 (662)
T ss_pred CCCEEEEEECC
T ss_conf 98079999788