HHsearch alignment for GI: 254780891 and conserved domain: PRK10604

Probab=100.00  E-value=4.7e-36  Score=248.90  Aligned_cols=196  Identities=16%  Similarity=0.064  Sum_probs=141.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH-HHHHHHH
Q ss_conf             999774545422799999999999614430147--8988899999999863110011223200000000013-4444432
Q gi|254780891|r   17 LLCSRICHDIISPIGAIHNSLELLDEVGIEDEV--MQLIRLSSMSAIIRLKFMRLAFGYTGSVDSLIGLGDI-EQVIEDF   93 (215)
Q Consensus        17 llas~IaHdlrtPL~~I~~~~elL~~~~~~~~~--~~~i~~~~~~~~~l~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~   93 (215)
T Consensus       214 ~f~a~vSHELRTPLt~i~~~lell~~~~~~e~~~l~~~i~~l~~lv~~lL~larl~~~~~~l~~~~~dl~~~i~~~~~~~  293 (433)
T PRK10604        214 QLIDGIAHELRTPLVRLRYRLEMSDNLSAAESQALNRDIGQLEALIEELLTYARLDRPQNELHLSEPDLPAWLSTHLADI  293 (433)
T ss_pred             HHHHHCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             99874024431689999999997049985789999999999999999999997636897878770236999999999999


Q ss_pred             H--HCCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH
Q ss_conf             2--01223321100000---010001234445676646876532001111123557720479998789844024588740
Q gi|254780891|r   94 I--AVDKRVQVSWTGEK---IDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIV  168 (215)
Q Consensus        94 ~--~~~~~~~~~~~~~~---~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~  168 (215)
T Consensus       294 ~~~~~~~~i~l~~~~~~~~~~~D~~~l~~~l~NLl~NA~kys--~~~v~v~~~~~~~~~~i~V~D~G~GI~-~e~~~~IF  370 (433)
T PRK10604        294 QAVTPEKTVRLKTPHQGDYGALDMRLMERVLDNLLNNALRYS--HSTVETSLLLDGDQATLIVEDDGPGIA-PEERERIF  370 (433)
T ss_pred             HHHCCCCCEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHCC--CCCEEEEEEEECCEEEEEEEECCCCCC-HHHHHHHC
T ss_conf             976559967997179886698789999999999999998718--997899999999999999997787889-89999865


Q ss_pred             CCCCC------CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf             54545------789987204999999999709879999877992699999419
Q gi|254780891|r  169 DGNVE------STIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLEK  215 (215)
Q Consensus       169 ~~~~~------~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~  215 (215)
T Consensus       371 epFyR~d~sr~~~~gG~GLGLaIvk~Iv~~hgG~i~v~s~~~gGa~f~i~LP~  423 (433)
T PRK10604        371 EPFVRLDPSRDRATGGCGLGLAIVHSIALAMGGSVNCDTSELGGARFSFSWPV  423 (433)
T ss_pred             CCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEECC
T ss_conf             79452888889999961388999999999819989999669984799999779