HHsearch alignment for GI: 254780891 and conserved domain: PRK10815
>PRK10815 sensor protein PhoQ; Provisional.
Probab=100.00 E-value=7.5e-34 Score=234.90 Aligned_cols=195 Identities=10% Similarity=0.058 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-HHHH----HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC----CHHHH
Q ss_conf 9977454542279999999999961443014-7898----8899999999863110011223200000000----01344
Q gi|254780891|r 18 LCSRICHDIISPIGAIHNSLELLDEVGIEDE-VMQL----IRLSSMSAIIRLKFMRLAFGYTGSVDSLIGL----GDIEQ 88 (215)
Q Consensus 18 las~IaHdlrtPL~~I~~~~elL~~~~~~~~-~~~~----i~~~~~~~~~l~~~~r~~~~~~~~~~~~~~~----~~~~~ 88 (215)
T Consensus 269 F~adaSHELRTPLa~l~~~le~L~~~~~~~~~~~~~~le~i~Rl~~li~~lL~~a~~~~~~~~~~~e~~~l~~ll~~l~~ 348 (484)
T PRK10815 269 TLTDLTHSLKTPLAVLQSTLRSLRTEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGEGTLLSRELHPVAPLLDNLTS 348 (484)
T ss_pred HHHCCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 98544364345699999999997469988789999999999999999999999987038986302555669999999999
Q ss_pred HHHHH-HHCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHH
Q ss_conf 44432-201223321100000--010001234445676646876532001111123557720479998789844024588
Q gi|254780891|r 89 VIEDF-IAVDKRVQVSWTGEK--IDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFT 165 (215)
Q Consensus 89 ~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~ 165 (215)
T Consensus 349 ~l~~~~~~k~i~l~~~~~~~~~~~gd~~~l~~~l~NLldNAikys~~~--v~I~~~~~~~~~~I~V~D~GpGIp-~e~~~ 425 (484)
T PRK10815 349 ALNKVYQRKGVNISLDISPEISFVGEQNDFMEVMGNVLDNACKYCLEF--VEISARQTDEHLHIVVEDDGPGIP-ESKRE 425 (484)
T ss_pred HHHHHHHHCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHCCCC--EEEEEEEECCEEEEEEEECCCCCC-HHHHH
T ss_conf 999999964977999648760795578999999999999999728886--799999969999999997399999-89998
Q ss_pred HHHCCCCCCC--CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf 7405454578--9987204999999999709879999877992699999419
Q gi|254780891|r 166 QIVDGNVEST--IDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLEK 215 (215)
Q Consensus 166 ~~~~~~~~~~--~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~ 215 (215)
T Consensus 426 ~IFeRF~R~d~~r~GsGLGLaIvk~Iv~~hgG~I~l~~s~~gG~~f~I~F~~ 477 (484)
T PRK10815 426 LIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVASESPLGGARMEVIFGR 477 (484)
T ss_pred HHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECC
T ss_conf 6246887799999985767999999999889989999569992489999738