HHsearch alignment for GI: 254780891 and conserved domain: PRK10841
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional.
Probab=100.00 E-value=1.4e-37 Score=258.51 Aligned_cols=196 Identities=10% Similarity=0.074 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHH----HHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 9997745454227999999999996144301---478988899999----999863110011223200000000013444
Q gi|254780891|r 17 LLCSRICHDIISPIGAIHNSLELLDEVGIED---EVMQLIRLSSMS----AIIRLKFMRLAFGYTGSVDSLIGLGDIEQV 89 (215)
Q Consensus 17 llas~IaHdlrtPL~~I~~~~elL~~~~~~~---~~~~~i~~~~~~----~~~l~~~~r~~~~~~~~~~~~~~~~~~~~~ 89 (215)
T Consensus 472 ~FLAnMSHEIRTPLnGIlG~lELL~~t~L~~~Qr~~l~tI~~Ss~~LL~lINDILDfSKIEAGkl~Le~~~F~l~~lv~~ 551 (947)
T PRK10841 472 MFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNH 551 (947)
T ss_pred HHHHHCCHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
T ss_conf 99875856436128999999999807999989999999999999999999999999998804984798525689999999
Q ss_pred HHHH-----HHCCCCCCCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCC
Q ss_conf 4432-----201223321100000----0100012344456766468765320011111235577204799987898440
Q gi|254780891|r 90 IEDF-----IAVDKRVQVSWTGEK----IDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARF 160 (215)
Q Consensus 90 ~~~~-----~~~~~~~~~~~~~~~----~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~ 160 (215)
T Consensus 552 v~~~~~~~A~~K~L~L~~~idp~vP~~v~GDp~RLrQIL~NLLsNAIKFT~~G~-I~L~V~~~~~~L~fsV~DTGIGIs- 629 (947)
T PRK10841 552 ITANYLPLVVKKQLGLYCFIEPDVPVSLNGDPMRLQQVISNLLSNAIKFTDTGC-IILHVRVDGDYLSFRVRDTGVGIP- 629 (947)
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCEEECHHHHHHHHHHHHHHHEEECCCCE-EEEEEEECCCEEEEEEEECCCCCC-
T ss_conf 999999999973987999979999965860688999999998877746679958-999999849999999998289989-
Q ss_pred HHHHHHHHCCCCC------CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEE
Q ss_conf 2458874054545------78998720499999999970987999987799269999941
Q gi|254780891|r 161 PEKFTQIVDGNVE------STIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLE 214 (215)
Q Consensus 161 ~e~~~~~~~~~~~------~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~ 214 (215)
T Consensus 630 ee~~~~LFepF~QaD~S~tR~yGGTGLGLAI~krLVeLMGG~I~VeSe~G~GStFtf~LP 689 (947)
T PRK10841 630 AKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLINMMDGDISVDSEPGMGSQFTVRIP 689 (947)
T ss_pred HHHHHHHHCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEE
T ss_conf 999998847111578754345799874199999999975995899916998079999975