HHsearch alignment for GI: 254780891 and conserved domain: PRK11100
>PRK11100 sensory histidine kinase CreC; Provisional.
Probab=100.00 E-value=1.5e-38 Score=264.72 Aligned_cols=198 Identities=18% Similarity=0.153 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH---HHHHHHHHHHHHHHHH----HHHHCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 99977454542279999999999961443014---7898889999999986----3110011223200000000013444
Q gi|254780891|r 17 LLCSRICHDIISPIGAIHNSLELLDEVGIEDE---VMQLIRLSSMSAIIRL----KFMRLAFGYTGSVDSLIGLGDIEQV 89 (215)
Q Consensus 17 llas~IaHdlrtPL~~I~~~~elL~~~~~~~~---~~~~i~~~~~~~~~l~----~~~r~~~~~~~~~~~~~~~~~~~~~ 89 (215)
T Consensus 258 ~fva~vSHELRTPLt~I~g~~ElL~~~~~~e~~~~~l~~I~~e~~RL~~LV~~LL~larle~~~~~~~~~~vdl~~ll~~ 337 (475)
T PRK11100 258 QYVQTLTHELKSPLAAIRGAAELLQEDPPPEDRQRFTGNILAQSARLQQLIDRLLELARLEQRQELEVLEPVALAALLEE 337 (475)
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHH
T ss_conf 99985408651179999999999738999899999999999999999999999999987515887675548759999999
Q ss_pred -HHHHH--HCCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHH
Q ss_conf -44322--01223321100000---0100012344456766468765320011111235577204799987898440245
Q gi|254780891|r 90 -IEDFI--AVDKRVQVSWTGEK---IDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEK 163 (215)
Q Consensus 90 -~~~~~--~~~~~~~~~~~~~~---~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~ 163 (215)
T Consensus 338 ~~~~~~~~~~~~~i~l~~~~~~~~v~~D~~~L~qvl~NLl~NAikys~~~g~I~I~~~~~~~~~~i~V~D~G~GIp-~e~ 416 (475)
T PRK11100 338 LVEAREAQAAAKGITLRLRPDDAAVLGDPFLLRQALGNLLDNAIDFTPEGGTITLSAERDGEQVALSVEDSGPGIP-DYA 416 (475)
T ss_pred HHHHHHHHHHHCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEEEECCCCCC-HHH
T ss_conf 9999999998689299995787669708999999999999999973899977999999969999999998488878-899
Q ss_pred HHHHHCCCCC-----CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf 8874054545-----789987204999999999709879999877992699999419
Q gi|254780891|r 164 FTQIVDGNVE-----STIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLEK 215 (215)
Q Consensus 164 ~~~~~~~~~~-----~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~ 215 (215)
T Consensus 417 l~~IFerFys~~r~~~~~~GsGLGLsIvk~Iv~~HgG~I~v~s~~~~Gt~f~i~LP~ 473 (475)
T PRK11100 417 LPRIFERFYSLPRPANGRKSTGLGLAFVREVARLHGGEVTLRNRPEGGVLATLTLPR 473 (475)
T ss_pred HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCC
T ss_conf 988616780377799998863079999999999859989999669980799999389