HHsearch alignment for GI: 254780891 and conserved domain: PRK11107

>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=100.00  E-value=6.1e-36  Score=248.17  Aligned_cols=197  Identities=13%  Similarity=0.072  Sum_probs=143.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHH----HHHHHHHHHCCCCCCCCCCCCCCCCHHHH
Q ss_conf             99997745454227999999999996144301---478988899999----99986311001122320000000001344
Q gi|254780891|r   16 ALLCSRICHDIISPIGAIHNSLELLDEVGIED---EVMQLIRLSSMS----AIIRLKFMRLAFGYTGSVDSLIGLGDIEQ   88 (215)
Q Consensus        16 allas~IaHdlrtPL~~I~~~~elL~~~~~~~---~~~~~i~~~~~~----~~~l~~~~r~~~~~~~~~~~~~~~~~~~~   88 (215)
T Consensus       294 s~FLAnmSHEiRTPLn~IiG~~~ll~~~~l~~~q~~~l~~i~~s~~~Ll~lIndiLD~SkiEag~l~le~~~f~l~~~~~  373 (920)
T PRK11107        294 SEFLANMSHELRTPLNGVIGFTRQTLKTPLTPTQRDYLQTIERSANNLLAIINDILDFSKLEAGKLILENIPFSLRETLD  373 (920)
T ss_pred             HHHHHHCHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
T ss_conf             99999664865421999999999985699999999999999999999999999999999984598367401678999999


Q ss_pred             HHHHHH---HCCCCCCC--CCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--C-C--CCEEEEEEEC
Q ss_conf             444322---01223321--10000----00100012344456766468765320011111235--5-7--7204799987
Q gi|254780891|r   89 VIEDFI---AVDKRVQV--SWTGE----KIDLSRERAKILLNLFMVAHASLPRGGKVTISVQD--S-K--NENIFSLKIN  154 (215)
Q Consensus        89 ~~~~~~---~~~~~~~~--~~~~~----~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~--~-~--~~~~i~V~D~  154 (215)
T Consensus       374 ~v~~~~~~~a~~k~l~l~~~~~~~~p~~v~gD~~Rl~QIl~NLl~NAiKfT~~G-~I~v~v~~~~~~~~~~~l~~~V~DT  452 (920)
T PRK11107        374 EVVTLLAHSAHEKGLELTLNIDPDVPDNVIGDPLRLQQIITNLVGNAIKFTESG-NIDILVELRALSDEKVQLEVQIRDT  452 (920)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCC-CEEEEEEEEECCCCEEEEEEEEEEE
T ss_conf             999999999997398799997899973065389999999999999999718899-3799999996479848999999997


Q ss_pred             CCCCCCHHHHHHHHCCCC------CCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEE
Q ss_conf             898440245887405454------578998720499999999970987999987799269999941
Q gi|254780891|r  155 GNLARFPEKFTQIVDGNV------ESTIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLE  214 (215)
Q Consensus       155 G~Gi~~~e~~~~~~~~~~------~~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~  214 (215)
T Consensus       453 GiGI~-~~~~~~iF~~F~q~d~s~~r~~gGtGLGLaI~k~Lv~~mgG~I~v~S~~g~GS~F~Ftlp  517 (920)
T PRK11107        453 GIGIS-ERQQSQLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHLP  517 (920)
T ss_pred             CCCCC-HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEE
T ss_conf             05869-999997854201567654456798774299999999980991799954899748999998