HHsearch alignment for GI: 254780891 and conserved domain: PRK11107
>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=100.00 E-value=6.1e-36 Score=248.17 Aligned_cols=197 Identities=13% Similarity=0.072 Sum_probs=143.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHH----HHHHHHHHHCCCCCCCCCCCCCCCCHHHH
Q ss_conf 99997745454227999999999996144301---478988899999----99986311001122320000000001344
Q gi|254780891|r 16 ALLCSRICHDIISPIGAIHNSLELLDEVGIED---EVMQLIRLSSMS----AIIRLKFMRLAFGYTGSVDSLIGLGDIEQ 88 (215)
Q Consensus 16 allas~IaHdlrtPL~~I~~~~elL~~~~~~~---~~~~~i~~~~~~----~~~l~~~~r~~~~~~~~~~~~~~~~~~~~ 88 (215)
T Consensus 294 s~FLAnmSHEiRTPLn~IiG~~~ll~~~~l~~~q~~~l~~i~~s~~~Ll~lIndiLD~SkiEag~l~le~~~f~l~~~~~ 373 (920)
T PRK11107 294 SEFLANMSHELRTPLNGVIGFTRQTLKTPLTPTQRDYLQTIERSANNLLAIINDILDFSKLEAGKLILENIPFSLRETLD 373 (920)
T ss_pred HHHHHHCHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
T ss_conf 99999664865421999999999985699999999999999999999999999999999984598367401678999999
Q ss_pred HHHHHH---HCCCCCCC--CCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--C-C--CCEEEEEEEC
Q ss_conf 444322---01223321--10000----00100012344456766468765320011111235--5-7--7204799987
Q gi|254780891|r 89 VIEDFI---AVDKRVQV--SWTGE----KIDLSRERAKILLNLFMVAHASLPRGGKVTISVQD--S-K--NENIFSLKIN 154 (215)
Q Consensus 89 ~~~~~~---~~~~~~~~--~~~~~----~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~--~-~--~~~~i~V~D~ 154 (215)
T Consensus 374 ~v~~~~~~~a~~k~l~l~~~~~~~~p~~v~gD~~Rl~QIl~NLl~NAiKfT~~G-~I~v~v~~~~~~~~~~~l~~~V~DT 452 (920)
T PRK11107 374 EVVTLLAHSAHEKGLELTLNIDPDVPDNVIGDPLRLQQIITNLVGNAIKFTESG-NIDILVELRALSDEKVQLEVQIRDT 452 (920)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCC-CEEEEEEEEECCCCEEEEEEEEEEE
T ss_conf 999999999997398799997899973065389999999999999999718899-3799999996479848999999997
Q ss_pred CCCCCCHHHHHHHHCCCC------CCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEE
Q ss_conf 898440245887405454------578998720499999999970987999987799269999941
Q gi|254780891|r 155 GNLARFPEKFTQIVDGNV------ESTIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLE 214 (215)
Q Consensus 155 G~Gi~~~e~~~~~~~~~~------~~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~ 214 (215)
T Consensus 453 GiGI~-~~~~~~iF~~F~q~d~s~~r~~gGtGLGLaI~k~Lv~~mgG~I~v~S~~g~GS~F~Ftlp 517 (920)
T PRK11107 453 GIGIS-ERQQSQLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHLP 517 (920)
T ss_pred CCCCC-HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEE
T ss_conf 05869-999997854201567654456798774299999999980991799954899748999998