HHsearch alignment for GI: 254780891 and conserved domain: PRK11466
>PRK11466 hybrid sensory histidine kinase TorS; Provisional.
Probab=100.00 E-value=8.7e-37 Score=253.57 Aligned_cols=197 Identities=14% Similarity=0.132 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH---HHHHHHHHHHH----HHHHHHHHHCCCC--CCCCCCCCCCCCHH
Q ss_conf 999977454542279999999999961443014---78988899999----9998631100112--23200000000013
Q gi|254780891|r 16 ALLCSRICHDIISPIGAIHNSLELLDEVGIEDE---VMQLIRLSSMS----AIIRLKFMRLAFG--YTGSVDSLIGLGDI 86 (215)
Q Consensus 16 allas~IaHdlrtPL~~I~~~~elL~~~~~~~~---~~~~i~~~~~~----~~~l~~~~r~~~~--~~~~~~~~~~~~~~ 86 (215)
T Consensus 445 S~FLA~MSHEIRTPLNgIlG~~eLL~~~~l~~~qr~~l~~I~~s~~~LL~lInDILD~SkiEaG~~~l~l~~~pf~l~~l 524 (912)
T PRK11466 445 SAFLAAMSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPL 524 (912)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
T ss_conf 99998713976775999999999984799998999999999999999999999999999981899813886115689999
Q ss_pred ----HHHHHHHH-HCCCCCCCCCC--CC--CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC
Q ss_conf ----44444322-01223321100--00--00100012344456766468765320011111235577204799987898
Q gi|254780891|r 87 ----EQVIEDFI-AVDKRVQVSWT--GE--KIDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNL 157 (215)
Q Consensus 87 ----~~~~~~~~-~~~~~~~~~~~--~~--~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~G 157 (215)
T Consensus 525 l~~v~~~~~~~a~~k~l~l~~~~~~~lp~~v~gD~~RLrQIL~NLlsNAiKFT~~-G~V~l~~~~~~~~l~~~V~DTGiG 603 (912)
T PRK11466 525 LESTLQLMSGRVKGRPIRLATDIADDVPSALMGDPRRIRQVITNLLSNALRFTDE-GSIVLRSRTDGEQWLVEVEDSGCG 603 (912)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHCCCCCC-CEEEEEEEECCCEEEEEEEECCCC
T ss_conf 9999999999998379789997279998608635889999999999987061899-679999998697899998508999
Q ss_pred CCCHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEE
Q ss_conf 4402458874054545--78998720499999999970987999987799269999941
Q gi|254780891|r 158 ARFPEKFTQIVDGNVE--STIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLE 214 (215)
Q Consensus 158 i~~~e~~~~~~~~~~~--~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~ 214 (215)
T Consensus 604 I~-~e~~~~IF~~F~Q~~~~~gGtGLGLaI~k~LvelMGG~I~V~S~~G~GS~F~~~LP 661 (912)
T PRK11466 604 ID-PAKLAEIFQPFVQVSGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLP 661 (912)
T ss_pred CC-HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEE
T ss_conf 99-99999884476158899899266899999999987997999716998728999997