HHsearch alignment of GI: 254780891 and MMDB domain: 1pvg_A_1-271
>1pvg_A (A:1-271) DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae}
Probab=96.11 E-value=0.017 Score=35.36 Aligned_cols=79 Identities=15% Similarity=0.095 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEEEEEEECCCCCCCH----------HH-HHHHHCC-C-----C
Q ss_conf 00123444567664687653200--111112355772047999878984402----------45-8874054-5-----4
Q gi|254780891|r 112 SRERAKILLNLFMVAHASLPRGG--KVTISVQDSKNENIFSLKINGNLARFP----------EK-FTQIVDG-N-----V 172 (215)
Q Consensus 112 ~~~~~qvl~NLi~NA~~a~~~gg--~I~i~~~~~~~~~~i~V~D~G~Gi~~~----------e~-~~~~~~~-~-----~ 172 (215)
..-+.+++.-+|.||++..-.|. .+.+.+. ....-.|+|+|+|+||+.+ |. |..+..+ . +
T Consensus 62 ~~gl~~i~~Eil~NavDe~~~~~~~~~~~~v~-~~~dgsisV~d~GrGIPv~~~~~~~~~~~E~i~t~l~aggkfd~~~y 140 (271)
T 1pvg_A 62 VPGLFKIFDEILVNAADNKVRDPSXKRIDVNI-HAEEHTIEVKNDGKGIPIEIHNKENIYIPEXIFGHLLTSSNYDDDEK 140 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE-ETTTTEEEEEEESSCCCCSBCTTTCSBHHHHHHHSSSEESCCCTTSC
T ss_pred CCCCEEEECEEEECHHHHHHCCCCCCEEEEEE-ECCCCEEEEEECCCCCCEEECCCCCCCCEEEEEEEEECCCCCCCCCC
T ss_conf 66011464689998124765277886699999-67998899996896346226566786412887777621653347874
Q ss_pred CCCCCCCCHHHHHHHHHHH
Q ss_conf 5789987204999999999
Q gi|254780891|r 173 ESTIDSHDIQFYYVILLAH 191 (215)
Q Consensus 173 ~~~~~g~GlGl~~~~~i~~ 191 (215)
....+.+|+|+.++..+-+
T Consensus 141 kvsgGlhGvG~svvNalS~ 159 (271)
T 1pvg_A 141 KVTGGRNGYGAKLCNIFST 159 (271)
T ss_dssp CCCSCCSSCHHHHHHHTEE
T ss_pred EECCCCCCCCHHHHHHHHH
T ss_conf 3328866536525566513