HHsearch alignment of GI: 254780891 and MMDB domain: 1pvg_A_1-271

>1pvg_A (A:1-271) DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae}
Probab=96.11  E-value=0.017  Score=35.36  Aligned_cols=79  Identities=15%  Similarity=0.095  Sum_probs=48.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEEEEEEECCCCCCCH----------HH-HHHHHCC-C-----C
Q ss_conf             00123444567664687653200--111112355772047999878984402----------45-8874054-5-----4
Q gi|254780891|r  112 SRERAKILLNLFMVAHASLPRGG--KVTISVQDSKNENIFSLKINGNLARFP----------EK-FTQIVDG-N-----V  172 (215)
Q Consensus       112 ~~~~~qvl~NLi~NA~~a~~~gg--~I~i~~~~~~~~~~i~V~D~G~Gi~~~----------e~-~~~~~~~-~-----~  172 (215)
                      ..-+.+++.-+|.||++..-.|.  .+.+.+. ....-.|+|+|+|+||+.+          |. |..+..+ .     +
T Consensus        62 ~~gl~~i~~Eil~NavDe~~~~~~~~~~~~v~-~~~dgsisV~d~GrGIPv~~~~~~~~~~~E~i~t~l~aggkfd~~~y  140 (271)
T 1pvg_A           62 VPGLFKIFDEILVNAADNKVRDPSXKRIDVNI-HAEEHTIEVKNDGKGIPIEIHNKENIYIPEXIFGHLLTSSNYDDDEK  140 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE-ETTTTEEEEEEESSCCCCSBCTTTCSBHHHHHHHSSSEESCCCTTSC
T ss_pred             CCCCEEEECEEEECHHHHHHCCCCCCEEEEEE-ECCCCEEEEEECCCCCCEEECCCCCCCCEEEEEEEEECCCCCCCCCC
T ss_conf             66011464689998124765277886699999-67998899996896346226566786412887777621653347874


Q ss_pred             CCCCCCCCHHHHHHHHHHH
Q ss_conf             5789987204999999999
Q gi|254780891|r  173 ESTIDSHDIQFYYVILLAH  191 (215)
Q Consensus       173 ~~~~~g~GlGl~~~~~i~~  191 (215)
                      ....+.+|+|+.++..+-+
T Consensus       141 kvsgGlhGvG~svvNalS~  159 (271)
T 1pvg_A          141 KVTGGRNGYGAKLCNIFST  159 (271)
T ss_dssp             CCCSCCSSCHHHHHHHTEE
T ss_pred             EECCCCCCCCHHHHHHHHH
T ss_conf             3328866536525566513